Sequence Description Alias PCC hrr AMTR_s00009p00252980 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-XII kinase evm_27.TU.AmTr_v1.0_scaffold00009.265 0.9260969794622999 2 AMTR_s00002p00253550 Protein modification.phosphorylation.CMGC kinase superfamily.SRPK kinase evm_27.TU.AmTr_v1.0_scaffold00002.376 0.9142059254067966 2 AMTR_s00001p00271430 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana PFU2, UBC23, evm_27.TU.AmTr_v1.0_scaffold00001.488 0.9083905399763992 3 AMTR_s00085p00052820 Cell division cycle protein 48 homolog OS=Glycine max CDC48A, CDC48, ATCDC48, evm_27.TU.AmTr_v1.0_scaffold00085.22 0.9013308568584233 5 AMTR_s00114p00117470 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.DCP1 regulatory component DCP1, ATDCP1, evm_27.TU.AmTr_v1.0_scaffold00114.51 0.8914150607666876 14 AMTR_s00021p00136760 Transcription factor GTE4 OS=Arabidopsis thaliana GTE4, evm_27.TU.AmTr_v1.0_scaffold00021.92 0.8879304797878775 6 AMTR_s00010p00259630 Probable methyltransferase PMT2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.426 0.8866490909374461 7 AMTR_s00001p00252660 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component ELF7, evm_27.TU.AmTr_v1.0_scaffold00001.325 0.8745552041335973 8 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8736481466098481 35 AMTR_s00032p00162420 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00032.135 0.87085190882826 11 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8679606129742816 34 AMTR_s00004p00164270 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00004.181 0.8660440832352772 13 AMTR_s00019p00238830 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component evm_27.TU.AmTr_v1.0_scaffold00019.346 0.864186643585726 18 AMTR_s00106p00011660 evm_27.TU.AmTr_v1.0_scaffold00106.2 0.8634064884321495 15 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8632482354224633 45 AMTR_s00041p00174550 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132, evm_27.TU.AmTr_v1.0_scaffold00041.131 0.8612185429581469 17 AMTR_s00038p00173360 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1, evm_27.TU.AmTr_v1.0_scaffold00038.113 0.8607000435433153 18 AMTR_s00022p00186280 Protein modification.phosphorylation.NAK kinase evm_27.TU.AmTr_v1.0_scaffold00022.200 0.8604828627027171 22 AMTR_s00007p00182220 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00007.146 0.8601937186307282 49 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8587826884214603 21 AMTR_s00024p00250640 Putative AC transposase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00024.334 0.8573867899797252 31 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.856209424204124 26 AMTR_s00067p00097840 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) evm_27.TU.AmTr_v1.0_scaffold00067.77 0.8559099854682777 27 AMTR_s00095p00059370 RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.TGA transcription factor TGA2, AHBP-1B, evm_27.TU.AmTr_v1.0_scaffold00095.34 0.8558873116507879 28 AMTR_s00154p00089740 Putative methylesterase 11, chloroplastic OS=Arabidopsis thaliana ATMES11, MES11, evm_27.TU.AmTr_v1.0_scaffold00154.60 0.8555646191058265 29 AMTR_s00012p00261940 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component EER4, TAF12B, evm_27.TU.AmTr_v1.0_scaffold00012.328 0.8543749863622973 31 AMTR_s00080p00104750 evm_27.TU.AmTr_v1.0_scaffold00080.39 0.85404244020429 32 AMTR_s00002p00233990 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.large component (SAE2) SAE2, EMB2764, ATSAE2, evm_27.TU.AmTr_v1.0_scaffold00002.270 0.853896380227382 33 AMTR_s00027p00200690 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.69 0.8537146917870719 34 AMTR_s00002p00262570 evm_27.TU.AmTr_v1.0_scaffold00002.462 0.8521847617962852 35 AMTR_s00111p00096770 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type) CAT9, evm_27.TU.AmTr_v1.0_scaffold00111.69 0.852128173417995 36 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.8519475507708026 37 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8519452500864445 38 AMTR_s00108p00092680 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1) SIZ1, ATSIZ1, evm_27.TU.AmTr_v1.0_scaffold00108.15 0.8509453482001587 39 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein ETR, ETR1, EIN1, AtETR1, evm_27.TU.AmTr_v1.0_scaffold00032.33 0.8509098654150503 53 AMTR_s00010p00265290 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB1, PTB, ATPTB1, evm_27.TU.AmTr_v1.0_scaffold00010.510 0.8495025404713777 41 AMTR_s00210p00019190 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) CNGC5, ATCNGC5, evm_27.TU.AmTr_v1.0_scaffold00210.4 0.8489587283609976 43 AMTR_s00057p00197090 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIe basal transcription factor complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00057.224 0.8489542845283053 44 AMTR_s00044p00111360 evm_27.TU.AmTr_v1.0_scaffold00044.83 0.8478709907993787 46 AMTR_s00062p00161920 Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana ATRBP45A, RBP45A, evm_27.TU.AmTr_v1.0_scaffold00062.151 0.8459166436118509 48 AMTR_s00044p00063370 evm_27.TU.AmTr_v1.0_scaffold00044.34 0.8453387785045384 50 AMTR_s00032p00196980 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components.RING1-type modification writer component ATRING1A, RING1A, evm_27.TU.AmTr_v1.0_scaffold00032.177 0.8450337018968039 51 AMTR_s00009p00258510 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component AXR6, ATCUL1, CUL1, evm_27.TU.AmTr_v1.0_scaffold00009.301 0.8447163596705537 69 AMTR_s00149p00102010 evm_27.TU.AmTr_v1.0_scaffold00149.85 0.8412743670315143 89 AMTR_s00023p00059770 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.SNX2 component SNX2a, evm_27.TU.AmTr_v1.0_scaffold00023.27 0.8390170542408681 66 AMTR_s00038p00018470 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIb basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00038.3 0.8387080180139962 61 AMTR_s00109p00055760 evm_27.TU.AmTr_v1.0_scaffold00109.41 0.8386377367390718 62 AMTR_s00081p00156000 F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00081.66 0.8357953564427208 69 AMTR_s00061p00064900 evm_27.TU.AmTr_v1.0_scaffold00061.39 0.8346737678772361 72 AMTR_s00007p00193000 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATTRB1, TRB1, evm_27.TU.AmTr_v1.0_scaffold00007.163 0.8343531568364293 73 AMTR_s00055p00173600 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL5, evm_27.TU.AmTr_v1.0_scaffold00055.90 0.8343416639841962 74 AMTR_s00074p00152100 evm_27.TU.AmTr_v1.0_scaffold00074.67 0.8338103125367033 77 AMTR_s00049p00095740 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP3 component ELP3, AtELP3, HAG3, ELO3, HAC8, evm_27.TU.AmTr_v1.0_scaffold00049.65 0.8328027638434401 80 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH7, evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8317864523933051 82 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8317838449837638 86 AMTR_s00095p00122180 Protein modification.protein folding and quality control.RAC ribosome-associated chaperone complex.ZRF Hsp40-chaperone component evm_27.TU.AmTr_v1.0_scaffold00095.75 0.8317030421032553 84 AMTR_s00060p00089240 Protein degradation.ER-associated protein degradation (ERAD) machinery.HRD3 component evm_27.TU.AmTr_v1.0_scaffold00060.36 0.8315333809451569 85 AMTR_s00033p00216030 evm_27.TU.AmTr_v1.0_scaffold00033.190 0.8312601364126142 86 AMTR_s00010p00237840 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00010.292 0.8310793996821471 88 AMTR_s00004p00061310 evm_27.TU.AmTr_v1.0_scaffold00004.43 0.8297356281751372 91 AMTR_s00039p00186000 WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.149 0.8291612630625985 92 AMTR_s02191p00008430 evm_27.TU.AmTr_v1.0_scaffold02191.1 0.828366907946659 95 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8282019624119241 96 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor NINJA, evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8278711880554984 97 AMTR_s00084p00172980 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.FREE1 associated protein evm_27.TU.AmTr_v1.0_scaffold00084.46 0.8265188151628218 99 AMTR_s00029p00205680 DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica RH8, ATRH8, evm_27.TU.AmTr_v1.0_scaffold00029.296 0.8263834079670753 100