Sequence Description Alias PCC hrr AMTR_s00113p00130190 evm_27.TU.AmTr_v1.0_scaffold00113.30 0.9440916542677711 1 AMTR_s00030p00056570 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC5 component SEC5A, evm_27.TU.AmTr_v1.0_scaffold00030.27 0.9414794596458519 2 AMTR_s00007p00264760 evm_27.TU.AmTr_v1.0_scaffold00007.353 0.938255190896865 3 AMTR_s00025p00231520 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.CG1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00025.337 0.9366858781431932 4 AMTR_s00013p00135450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH, evm_27.TU.AmTr_v1.0_scaffold00013.66 0.9314763453177056 5 AMTR_s00110p00131760 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA, evm_27.TU.AmTr_v1.0_scaffold00110.106 0.9295118401327142 6 AMTR_s00003p00144740 evm_27.TU.AmTr_v1.0_scaffold00003.116 0.9251004270279592 25 AMTR_s00008p00028880 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00008.9 0.9212607599733071 8 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana GDO, FASS 2, EMB40, TON2, FASS, FS1, evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9172473896781227 32 AMTR_s00053p00089490 Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.44 0.9161288079410552 10 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9158735438637835 91 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana FAS4, ATFAS4, evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9149670898679414 17 AMTR_s00049p00219600 evm_27.TU.AmTr_v1.0_scaffold00049.255 0.9147337417740649 24 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.9134102910952543 14 AMTR_s00148p00070260 Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.44 0.9128518555003563 15 AMTR_s00166p00033890 Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.16 0.9120326291388937 16 AMTR_s00023p00236700 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00023.196 0.9101785036347981 18 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9101302492782809 32 AMTR_s00040p00044580 evm_27.TU.AmTr_v1.0_scaffold00040.21 0.9100273073737037 20 AMTR_s00023p00252370 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP2) MAP2B, evm_27.TU.AmTr_v1.0_scaffold00023.248 0.909469867950915 21 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.9092701230249987 22 AMTR_s00036p00071330 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.25 0.9077216479378286 50 AMTR_s00128p00114010 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00128.43 0.9075605417519889 52 AMTR_s00006p00264510 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB5 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00006.267 0.9063010695795582 37 AMTR_s00147p00076810 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-delta evm_27.TU.AmTr_v1.0_scaffold00147.36 0.9056612008741798 29 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.9054627239531505 42 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.905383749507295 28 AMTR_s00106p00013240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.SWA2/NOC1 assembly factor EDA25, SWA2, evm_27.TU.AmTr_v1.0_scaffold00106.3 0.9044890491554135 29 AMTR_s00058p00176500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit evm_27.TU.AmTr_v1.0_scaffold00058.166 0.9041734475872779 32 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9038384833729805 60 AMTR_s00019p00253350 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I alpha-mannosidase I MNS1, MANIB, evm_27.TU.AmTr_v1.0_scaffold00019.426 0.9030042464774893 33 AMTR_s00033p00230550 evm_27.TU.AmTr_v1.0_scaffold00033.225 0.9021666384933039 34 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor IMP4, evm_27.TU.AmTr_v1.0_scaffold00101.112 0.9018479229770892 35 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component EIF4A-III, evm_27.TU.AmTr_v1.0_scaffold00029.87 0.9017350951246033 36 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.9009799460198568 38 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.9007917480240244 39 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.9001169374947006 41 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.8985879102668498 52 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.8976808579497962 73 AMTR_s00182p00050050 Protein degradation.peptidase families.serine-type peptidase activities.S28 serine carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00182.30 0.8973355344817648 45 AMTR_s00025p00202360 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.257 0.8969091947615329 46 AMTR_s00005p00250950 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M1 neutral/aromatic-hydroxyl amino acid aminopeptidase ATAPM1, APM1, evm_27.TU.AmTr_v1.0_scaffold00005.158 0.8956491625194162 49 AMTR_s00146p00087440 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component emb1860, TIM50, evm_27.TU.AmTr_v1.0_scaffold00146.55 0.8947470569653723 51 AMTR_s00202p00037220 Disease resistance protein RPM1 OS=Arabidopsis thaliana RPM1, RPS3, evm_27.TU.AmTr_v1.0_scaffold00202.14 0.894050754054102 53 AMTR_s00004p00234640 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component ALA2, evm_27.TU.AmTr_v1.0_scaffold00004.225 0.893813996039615 54 AMTR_s00027p00246350 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana GFA2, evm_27.TU.AmTr_v1.0_scaffold00027.153 0.8936334736436448 61 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.8927763162413056 57 AMTR_s00155p00043060 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase ATIMD2, IMD2, evm_27.TU.AmTr_v1.0_scaffold00155.21 0.8922983643997601 58 AMTR_s00001p00247720 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.CTU1 component ROL5, evm_27.TU.AmTr_v1.0_scaffold00001.303 0.8918188669600051 59 AMTR_s00016p00241100 ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.254 0.8905461328531566 68 AMTR_s00059p00033770 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2A factor evm_27.TU.AmTr_v1.0_scaffold00059.16 0.8891766240981779 61 AMTR_s00053p00166720 evm_27.TU.AmTr_v1.0_scaffold00053.113 0.8885795501318543 62 AMTR_s00039p00206760 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component evm_27.TU.AmTr_v1.0_scaffold00039.174 0.8885386257336073 63 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.8878818260833509 64 AMTR_s00025p00115250 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS11 component VPS11, ATVPS11, evm_27.TU.AmTr_v1.0_scaffold00025.104 0.886443582151015 67 AMTR_s00001p00265330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit XPB1, ATXPB1, evm_27.TU.AmTr_v1.0_scaffold00001.403 0.8861942320306455 75 AMTR_s00065p00132670 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst ROF2, FKBP65, ATFKBP65, evm_27.TU.AmTr_v1.0_scaffold00065.87 0.8859751411564231 70 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.8854848308512819 72 AMTR_s00156p00017490 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor VPS9, ATVPS9A, VPS9A, evm_27.TU.AmTr_v1.0_scaffold00156.4 0.8854238576704536 73 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.8851716707492195 74 AMTR_s00042p00019010 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00042.2 0.8849496211937143 75 AMTR_s00056p00165600 Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana SRO5, evm_27.TU.AmTr_v1.0_scaffold00056.145 0.884755735610616 76 AMTR_s00025p00098730 evm_27.TU.AmTr_v1.0_scaffold00025.81 0.884022664339627 77 AMTR_s00110p00142760 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00110.117 0.8837629641463192 78 AMTR_s00062p00152740 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1, evm_27.TU.AmTr_v1.0_scaffold00062.140 0.8824546711173155 80 AMTR_s00006p00246940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase OVA9, evm_27.TU.AmTr_v1.0_scaffold00006.134 0.8819088707517361 81 AMTR_s00066p00170330 Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.198 0.8817227095195643 82 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein DRP3A, ADL2, evm_27.TU.AmTr_v1.0_scaffold00033.191 0.8817024878710744 83 AMTR_s00017p00231540 Protein BOBBER 1 OS=Arabidopsis thaliana BOB1, evm_27.TU.AmTr_v1.0_scaffold00017.184 0.8815808987823558 84 AMTR_s00142p00013680 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit evm_27.TU.AmTr_v1.0_scaffold00142.4 0.8815460794645014 90 AMTR_s00111p00073020 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC8 component CDC23, APC8, evm_27.TU.AmTr_v1.0_scaffold00111.44 0.8814528582554335 86 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.880998469996856 87 AMTR_s00010p00221510 RNA processing.RNA modification.rRNA/tRNA methylation.TRM9-TRM112 tRNA uridine-methyltransferase complex.TRM9 component evm_27.TU.AmTr_v1.0_scaffold00010.238 0.8802719321467458 89 AMTR_s00088p00153240 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00088.123 0.8800125436515659 97 AMTR_s00033p00153180 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase BRIZ2, evm_27.TU.AmTr_v1.0_scaffold00033.98 0.8798316238688846 91 AMTR_s00061p00208140 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.PARN poly(A)-specific ribonuclease AHG2, ATPARN, evm_27.TU.AmTr_v1.0_scaffold00061.257 0.8798303762905731 92 AMTR_s00041p00173130 Multi-process regulation.circadian clock.FIO1 circadian clock regulator FIO1, evm_27.TU.AmTr_v1.0_scaffold00041.129 0.8795433483151122 95 AMTR_s00011p00243170 Transcription factor GTE6 OS=Arabidopsis thaliana GTE1, GTE01, IMB1, evm_27.TU.AmTr_v1.0_scaffold00011.139 0.8787210664028429 96 AMTR_s00064p00067290 Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00064.21 0.878629031958294 97 AMTR_s00057p00038540 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00057.18 0.877258306226501 100