Sequence Description Alias PCC hrr AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8869499365446916 13 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component CPSF30, ATCPSF30, evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8851590256793701 13 AMTR_s00004p00270830 RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component NF-YC3, evm_27.TU.AmTr_v1.0_scaffold00004.302 0.8796884383109265 8 AMTR_s00061p00165040 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component STA1, EMB2770, evm_27.TU.AmTr_v1.0_scaffold00061.166 0.8653510106324893 27 AMTR_s00012p00035940 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00012.6 0.8636910487254735 12 AMTR_s00023p00220060 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M1 neutral/aromatic-hydroxyl amino acid aminopeptidase evm_27.TU.AmTr_v1.0_scaffold00023.164 0.8625819013048309 6 AMTR_s00101p00033020 UBP1-associated protein 2A OS=Arabidopsis thaliana UBA2A, evm_27.TU.AmTr_v1.0_scaffold00101.8 0.8553050192898616 21 AMTR_s00001p00262160 External stimuli response.biotic stress.systemic acquired resistance (SAR).pipecolic acid biosynthesis.SARD4 cyclodeaminase evm_27.TU.AmTr_v1.0_scaffold00001.383 0.8542707761369759 11 AMTR_s00002p00272180 F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.669 0.8487562341397955 9 AMTR_s00023p00015970 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00023.4 0.8481887924514963 80 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.8447397246197764 36 AMTR_s00082p00053170 evm_27.TU.AmTr_v1.0_scaffold00082.2 0.8428247182910042 44 AMTR_s00057p00106270 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex7 component ATPEX7, PEX7, evm_27.TU.AmTr_v1.0_scaffold00057.82 0.8422545780910584 13 AMTR_s00088p00141580 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB38, ATPUB38, evm_27.TU.AmTr_v1.0_scaffold00088.108 0.841827693709517 21 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.8417970718892457 73 AMTR_s00009p00268850 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00009.433 0.8412242474199524 36 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8403517583246078 43 AMTR_s00062p00209350 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase GT72B1, UGT72B1, evm_27.TU.AmTr_v1.0_scaffold00062.228 0.8400081271212834 18 AMTR_s00002p00206060 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component evm_27.TU.AmTr_v1.0_scaffold00002.205 0.8390263642674629 78 AMTR_s00032p00242160 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP5/RTF1 component VIP5, evm_27.TU.AmTr_v1.0_scaffold00032.281 0.8371304597668608 20 AMTR_s00017p00253050 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase evm_27.TU.AmTr_v1.0_scaffold00017.262 0.8367057163178105 25 AMTR_s00008p00153950 RNA processing.organelle machineries.RNA editing.mitochondrial RNA editing.MEF10 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00008.76 0.8342177037461918 24 AMTR_s00001p00269200 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase evm_27.TU.AmTr_v1.0_scaffold00001.433 0.8328408446124805 74 AMTR_s00101p00128190 Transcription factor LUX OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.100 0.8313734579512686 24 AMTR_s00060p00187100 F-box protein SKIP28 OS=Arabidopsis thaliana MEE11, evm_27.TU.AmTr_v1.0_scaffold00060.123 0.8266520328413511 45 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.826332933630687 48 AMTR_s00065p00037640 evm_27.TU.AmTr_v1.0_scaffold00065.16 0.8224814921186924 46 AMTR_s00003p00079190 External stimuli response.temperature.temperature sensors.PHY-B temperature sensor protein HY3, OOP1, PHYB, evm_27.TU.AmTr_v1.0_scaffold00003.45 0.8218727027568696 65 AMTR_s03082p00000960 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71B2, evm_27.TU.AmTr_v1.0_scaffold03082.1 0.8216450864721666 33 AMTR_s00040p00098330 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana CRR2, evm_27.TU.AmTr_v1.0_scaffold00040.61 0.8213437634451379 46 AMTR_s00177p00046770 Enzyme classification.EC_1 oxidoreductases.EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor GAPC-1, GAPC, GAPC1, evm_27.TU.AmTr_v1.0_scaffold00177.22 0.8194583636320354 35 AMTR_s00137p00067410 Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00137.29 0.8178061010148798 65 AMTR_s00045p00185750 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC15 component evm_27.TU.AmTr_v1.0_scaffold00045.231 0.8163746212052471 40 AMTR_s00154p00049600 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.homoserine kinase DMR1, HSK, evm_27.TU.AmTr_v1.0_scaffold00154.31 0.8161477878691392 52 AMTR_s00067p00185510 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.197 0.815038120270028 43 AMTR_s00017p00035550 RNA biosynthesis.transcriptional activation.TCP transcription factor evm_27.TU.AmTr_v1.0_scaffold00017.13 0.8131622660252508 44 AMTR_s00154p00086420 evm_27.TU.AmTr_v1.0_scaffold00154.55 0.8117892748063424 65 AMTR_s00024p00251990 Chromatin organisation.histone modifications.histone acetylation.CBP/p300 histone acetyltransferase ATHPCAT2, HAC1, ATHAC1, PCAT2, evm_27.TU.AmTr_v1.0_scaffold00024.345 0.8086760624883227 47 AMTR_s00165p00029520 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT85A1, ATUGT85A1, evm_27.TU.AmTr_v1.0_scaffold00165.14 0.8060761282251582 67 AMTR_s00062p00160630 Protein translocation.peroxisome.importomer translocation system.cargo-receptor docking complex.Pex13 component APM2, PEX13, evm_27.TU.AmTr_v1.0_scaffold00062.150 0.8045000440170289 50 AMTR_s00009p00254980 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT88A1, evm_27.TU.AmTr_v1.0_scaffold00009.275 0.8031926481653959 52 AMTR_s00041p00167350 External stimuli response.temperature.Csd (cold-shock-domain) protein 0.8019699261365894 53 AMTR_s00088p00169530 evm_27.TU.AmTr_v1.0_scaffold00088.144 0.8014942595268504 55 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.801250663530265 57 AMTR_s00001p00270240 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO, evm_27.TU.AmTr_v1.0_scaffold00001.459 0.800995528507492 58 AMTR_s00068p00031610 Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.7 0.8007436462052928 72 AMTR_s00132p00084290 Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO-type) evm_27.TU.AmTr_v1.0_scaffold00132.22 0.8006212396020235 60 AMTR_s00002p00253880 Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.377 0.8004384711238888 61 AMTR_s00073p00163500 evm_27.TU.AmTr_v1.0_scaffold00073.47 0.8003235814075219 62 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.7995778467996757 66 AMTR_s00038p00110060 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PC-PLA1-type phospholipase A1 evm_27.TU.AmTr_v1.0_scaffold00038.54 0.7989838960569932 68 AMTR_s00057p00046830 Acetate/butyrate--CoA ligase AAE7, peroxisomal OS=Arabidopsis thaliana ACN1, AAE7, evm_27.TU.AmTr_v1.0_scaffold00057.25 0.7988721536083696 69 AMTR_s00070p00139300 FT-interacting protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00070.78 0.797040226534215 70 AMTR_s00108p00114900 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component evm_27.TU.AmTr_v1.0_scaffold00108.27 0.7968762748136917 71 AMTR_s00021p00110500 UBP1-associated protein 2C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.59 0.7951725235940519 73 AMTR_s00034p00071480 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana ITN1, evm_27.TU.AmTr_v1.0_scaffold00034.17 0.7949467131829698 74 AMTR_s00143p00054770 evm_27.TU.AmTr_v1.0_scaffold00143.11 0.7941822383403423 75 AMTR_s00022p00176740 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.187 0.7928280871708402 76 AMTR_s00101p00094580 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component evm_27.TU.AmTr_v1.0_scaffold00101.72 0.7924551312095153 89 AMTR_s00032p00220250 evm_27.TU.AmTr_v1.0_scaffold00032.225 0.7923930110419415 78 AMTR_s00153p00057910 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00153.25 0.7920370932952577 79 AMTR_s00120p00125950 evm_27.TU.AmTr_v1.0_scaffold00120.60 0.791500620582677 81 AMTR_s00060p00138860 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00060.78 0.7906834416413601 83 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1, evm_27.TU.AmTr_v1.0_scaffold00032.93 0.7901603205638499 85 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase ATMKP1, MKP1, evm_27.TU.AmTr_v1.0_scaffold00174.16 0.787771737516069 87 AMTR_s00058p00125550 evm_27.TU.AmTr_v1.0_scaffold00058.89 0.7871600494615002 90 AMTR_s00001p00261430 Multi-process regulation.circadian clock.evening element regulation.REVEILLE clock factor evm_27.TU.AmTr_v1.0_scaffold00001.380 0.7868616381549943 91 AMTR_s00035p00220050 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase evm_27.TU.AmTr_v1.0_scaffold00035.47 0.7864506021703813 92 AMTR_s00078p00157800 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.NFS1 cysteine desulfurase component ATNFS1, NFS1, ATNIFS1, NIFS1, evm_27.TU.AmTr_v1.0_scaffold00078.141 0.7847112360895874 96 AMTR_s00005p00240090 AT-hook motif nuclear-localized protein 14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00005.128 0.7845285165055652 98