Sequence Description Alias PCC hrr AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase TRM10, AtTRM, evm_27.TU.AmTr_v1.0_scaffold00061.266 0.9239294174525736 4 AMTR_s00089p00044750 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin HOS1, evm_27.TU.AmTr_v1.0_scaffold00089.13 0.9184891949008782 4 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana PHB1, ATPHB1, evm_27.TU.AmTr_v1.0_scaffold00058.65 0.9062801963690721 13 AMTR_s00146p00068870 UBP1-associated proteins 1C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00146.41 0.9054673067766889 10 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component TIF3H1, evm_27.TU.AmTr_v1.0_scaffold00087.43 0.9045873726603831 10 AMTR_s00019p00217910 Solute transport.porins.VDAC voltage-gated anion channel ATVDAC4, VDAC4, evm_27.TU.AmTr_v1.0_scaffold00019.268 0.9035996122942931 6 AMTR_s00077p00151100 RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor evm_27.TU.AmTr_v1.0_scaffold00077.154 0.9026448371398755 7 AMTR_s00089p00047210 evm_27.TU.AmTr_v1.0_scaffold00089.14 0.896104133833086 8 AMTR_s00021p00193930 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.adrenodoxin component MFDX2, ATMFDX2, evm_27.TU.AmTr_v1.0_scaffold00021.155 0.8934604403531282 9 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.892873523097239 28 AMTR_s00109p00125300 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-alpha component evm_27.TU.AmTr_v1.0_scaffold00109.126 0.892136894636472 13 AMTR_s00002p00226510 evm_27.TU.AmTr_v1.0_scaffold00002.251 0.8894819107007736 19 AMTR_s00039p00202100 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component evm_27.TU.AmTr_v1.0_scaffold00039.167 0.8884850651113898 22 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8864599738442761 16 AMTR_s00088p00121830 DNA damage response.DNA repair polymerase activities.DNA polymerase lambda evm_27.TU.AmTr_v1.0_scaffold00088.88 0.8862324132949608 15 AMTR_s00061p00211510 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00061.262 0.8859050060082114 16 AMTR_s00077p00121720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component EIF2, AteIF3f, eIF3F, evm_27.TU.AmTr_v1.0_scaffold00077.114 0.8824908434753508 17 AMTR_s00095p00023580 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana PPR596, evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8816488859303135 18 AMTR_s00025p00180550 Protein translocation.mitochondrion.outer mitochondrion membrane SAM insertion system.Metaxin component evm_27.TU.AmTr_v1.0_scaffold00025.217 0.8801865679216235 42 AMTR_s00010p00232470 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI transamidase complex.PIG-T component evm_27.TU.AmTr_v1.0_scaffold00010.270 0.8791875513483947 20 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.8783987609422899 88 AMTR_s00007p00078630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS18 component evm_27.TU.AmTr_v1.0_scaffold00007.43 0.8777230921957425 36 AMTR_s00078p00107740 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component ATHMG, HMG, SSRP1, NFD, evm_27.TU.AmTr_v1.0_scaffold00078.79 0.8772823704601533 33 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.8751704528353315 59 AMTR_s00153p00030600 evm_27.TU.AmTr_v1.0_scaffold00153.10 0.8747791623381472 26 AMTR_s00102p00062980 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component TIF3E1, INT6, ATEIF3E-1, INT-6, ATINT6, EIF3E, evm_27.TU.AmTr_v1.0_scaffold00102.29 0.8743718264390349 27 AMTR_s00036p00239350 evm_27.TU.AmTr_v1.0_scaffold00036.191 0.8740745223671479 29 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.8738057583241775 100 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.872268740213451 33 AMTR_s00113p00129940 Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00113.28 0.8715323114578197 31 AMTR_s00072p00173000 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.ENP1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00072.122 0.8712890741007658 32 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor EMB2271, evm_27.TU.AmTr_v1.0_scaffold00155.51 0.864276212976156 34 AMTR_s00004p00077740 evm_27.TU.AmTr_v1.0_scaffold00004.60 0.8641850949640247 35 AMTR_s00060p00174830 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component RP1, RPL3A, emb2207, ARP1, evm_27.TU.AmTr_v1.0_scaffold00060.112 0.8639840141250964 43 AMTR_s00049p00209260 evm_27.TU.AmTr_v1.0_scaffold00049.231 0.8633701040081251 38 AMTR_s00001p00032990 Chromatin organisation.chromatin remodeling complexes.additional core components.ARP7 component ATARP7, ARP7, evm_27.TU.AmTr_v1.0_scaffold00001.16 0.8616565120859339 39 AMTR_s00067p00095130 evm_27.TU.AmTr_v1.0_scaffold00067.73 0.8610212252817647 40 AMTR_s00001p00272400 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component emb1860, TIM50, evm_27.TU.AmTr_v1.0_scaffold00001.524 0.857247452477503 48 AMTR_s00019p00202640 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component RPT2a, evm_27.TU.AmTr_v1.0_scaffold00019.237 0.8565161457465098 76 AMTR_s00153p00012840 Protein translocation.mitochondrion.outer mitochondrion membrane SAM insertion system.SAM/Tob55 component evm_27.TU.AmTr_v1.0_scaffold00153.1 0.8564092826083647 46 AMTR_s00002p00183560 evm_27.TU.AmTr_v1.0_scaffold00002.161 0.8558736825332763 47 AMTR_s00159p00042980 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.ERCC6 chromatin remodeling factor CHR24, evm_27.TU.AmTr_v1.0_scaffold00159.12 0.8556390616095576 65 AMTR_s00019p00240430 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC9 component OSB3, evm_27.TU.AmTr_v1.0_scaffold00019.351 0.854115857917701 49 AMTR_s00019p00126240 evm_27.TU.AmTr_v1.0_scaffold00019.105 0.8530264287462234 50 AMTR_s00079p00162940 evm_27.TU.AmTr_v1.0_scaffold00079.75 0.8514594869219433 52 AMTR_s00048p00053570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor TOZ, evm_27.TU.AmTr_v1.0_scaffold00048.18 0.8512774586945502 92 AMTR_s00012p00263410 Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.343 0.8504906263767584 54 AMTR_s00071p00172900 ECT11, evm_27.TU.AmTr_v1.0_scaffold00071.175 0.8502959732475879 86 AMTR_s00010p00116710 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.69 0.8492239428969083 56 AMTR_s00022p00247820 evm_27.TU.AmTr_v1.0_scaffold00022.371 0.8487119687578825 57 AMTR_s00046p00087940 evm_27.TU.AmTr_v1.0_scaffold00046.44 0.8448458719118895 60 AMTR_s00037p00233460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00037.150 0.8444720802303233 62 AMTR_s00003p00139120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor APUM24, PUM24, evm_27.TU.AmTr_v1.0_scaffold00003.108 0.8437992101415164 83 AMTR_s00048p00227650 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00048.220 0.8433017446372992 64 AMTR_s00011p00177280 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group ATIPK1, IPK1, evm_27.TU.AmTr_v1.0_scaffold00011.51 0.8419499625094994 73 AMTR_s00069p00092600 Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana RPD1, evm_27.TU.AmTr_v1.0_scaffold00069.57 0.8418852669008425 68 AMTR_s00003p00104470 Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.69 0.8416617687820963 69 AMTR_s00047p00140090 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00047.62 0.8399963467366273 73 AMTR_s00041p00224610 evm_27.TU.AmTr_v1.0_scaffold00041.259 0.8399745255332122 74 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor APUM23, PUM23, evm_27.TU.AmTr_v1.0_scaffold00129.17 0.8397937694167948 90 AMTR_s00036p00184370 evm_27.TU.AmTr_v1.0_scaffold00036.95 0.8394474285874399 78 AMTR_s00023p00202890 evm_27.TU.AmTr_v1.0_scaffold00023.143 0.8387380362015892 79 AMTR_s00067p00125830 evm_27.TU.AmTr_v1.0_scaffold00067.106 0.8383410132705055 80 AMTR_s00177p00038700 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.15 0.8381387658209231 81 AMTR_s00186p00039470 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase ATPDI5, PDI5, ATPDIL1-1, PDIL1-1, evm_27.TU.AmTr_v1.0_scaffold00186.14 0.8370442413054009 83 AMTR_s00002p00244460 RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein DMS1, DRD1, CHR35, evm_27.TU.AmTr_v1.0_scaffold00002.323 0.8350629766489566 87 AMTR_s00036p00239250 evm_27.TU.AmTr_v1.0_scaffold00036.190 0.829172506922827 96 AMTR_s00019p00237470 evm_27.TU.AmTr_v1.0_scaffold00019.337 0.8282323547378478 98 AMTR_s00010p00224530 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.247 0.8274919322716395 99 AMTR_s00010p00262600 Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana MDH, evm_27.TU.AmTr_v1.0_scaffold00010.472 0.8274570852345238 100