Sequence Description Alias PCC hrr AMTR_s00003p00212290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1, evm_27.TU.AmTr_v1.0_scaffold00003.203 0.9264374172735167 6 AMTR_s00007p00256990 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.amylose synthesis regulatory scaffold protein evm_27.TU.AmTr_v1.0_scaffold00007.305 0.922249074037997 2 AMTR_s00156p00076210 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component RPL15, evm_27.TU.AmTr_v1.0_scaffold00156.37 0.9154443832231214 3 AMTR_s00041p00009900 evm_27.TU.AmTr_v1.0_scaffold00041.2 0.9120007900519648 27 AMTR_s00115p00062270 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein AtCEST, CEST, evm_27.TU.AmTr_v1.0_scaffold00115.3 0.9089646062006574 7 AMTR_s00025p00237880 evm_27.TU.AmTr_v1.0_scaffold00025.357 0.9053735241387482 20 AMTR_s00177p00036720 evm_27.TU.AmTr_v1.0_scaffold00177.14 0.9037101633815268 7 AMTR_s00020p00012640 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00020.3 0.8966151457557191 85 AMTR_s00058p00188880 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP1, Deg1, evm_27.TU.AmTr_v1.0_scaffold00058.187 0.896598018217524 12 AMTR_s00054p00095350 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase ATHDA14, hda14, evm_27.TU.AmTr_v1.0_scaffold00054.32 0.8962940251553817 67 AMTR_s00003p00168720 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138, evm_27.TU.AmTr_v1.0_scaffold00003.145 0.8954652168201575 73 AMTR_s00040p00174940 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.165 0.8938477986662987 59 AMTR_s00039p00224760 evm_27.TU.AmTr_v1.0_scaffold00039.203 0.8921997266633148 13 AMTR_s00023p00184000 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein ATTERC, PDE149, evm_27.TU.AmTr_v1.0_scaffold00023.122 0.8920878481784097 14 AMTR_s00050p00111180 Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.SEX4-type phosphoglucan phosphatase ATSEX4, ATPTPKIS1, DSP4, SEX4, evm_27.TU.AmTr_v1.0_scaffold00050.23 0.8908736947060069 31 AMTR_s00066p00198600 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1, evm_27.TU.AmTr_v1.0_scaffold00066.264 0.8845296809161823 93 AMTR_s00103p00115980 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana ATAB2, evm_27.TU.AmTr_v1.0_scaffold00103.69 0.8844770574548557 69 AMTR_s00002p00128010 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP9/FSD2 component FSD2, evm_27.TU.AmTr_v1.0_scaffold00002.85 0.882918001594893 39 AMTR_s00038p00072170 Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.31 0.8819579683032689 38 AMTR_s00036p00109340 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component RPL12-A, RPL12, evm_27.TU.AmTr_v1.0_scaffold00036.44 0.8809848813106855 39 AMTR_s00002p00100650 evm_27.TU.AmTr_v1.0_scaffold00002.59 0.8796151676550689 90 AMTR_s00041p00056550 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2, evm_27.TU.AmTr_v1.0_scaffold00041.27 0.8793178360898453 24 AMTR_s00142p00060790 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101, evm_27.TU.AmTr_v1.0_scaffold00142.34 0.8784498102230149 100 AMTR_s00023p00218670 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component evm_27.TU.AmTr_v1.0_scaffold00023.162 0.8777174127713934 32 AMTR_s00071p00187330 Prolycopene isomerase, chloroplastic OS=Daucus carota evm_27.TU.AmTr_v1.0_scaffold00071.196 0.8772295465308404 81 AMTR_s00028p00227970 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB4 component CCB4, evm_27.TU.AmTr_v1.0_scaffold00028.110 0.8748536331770901 49 AMTR_s00095p00166740 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor evm_27.TU.AmTr_v1.0_scaffold00095.146 0.8737672516188052 31 AMTR_s00104p00098970 PIFI, evm_27.TU.AmTr_v1.0_scaffold00104.36 0.8690646871078526 35 AMTR_s00002p00249620 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica CPSAR1, EMB269, ATOBGC, evm_27.TU.AmTr_v1.0_scaffold00002.348 0.8677793456674172 36 AMTR_s00021p00230830 evm_27.TU.AmTr_v1.0_scaffold00021.226 0.8676102825552474 37 AMTR_s00053p00152680 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.100 0.867301652951394 98 AMTR_s00062p00076280 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana GDC1, evm_27.TU.AmTr_v1.0_scaffold00062.49 0.8670899859467583 40 AMTR_s00025p00214840 Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana ATSS4, SS4, SSIV, evm_27.TU.AmTr_v1.0_scaffold00025.290 0.8648078519241931 93 AMTR_s00039p00224840 evm_27.TU.AmTr_v1.0_scaffold00039.204 0.8645477767840156 48 AMTR_s00021p00200120 evm_27.TU.AmTr_v1.0_scaffold00021.166 0.8631617819008175 100 AMTR_s00044p00231480 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) MAP1C, MAP1B, evm_27.TU.AmTr_v1.0_scaffold00044.254 0.8602121192255175 51 AMTR_s00009p00224110 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component HCF106, evm_27.TU.AmTr_v1.0_scaffold00009.171 0.8578978203250613 54 AMTR_s00001p00208370 evm_27.TU.AmTr_v1.0_scaffold00001.211 0.855404178937779 56 AMTR_s00025p00112220 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.100 0.8501972495789892 64 AMTR_s00001p00178450 Protein modification.disulfide bond formation.chloroplast.thiol-disulfide oxidoreductase (LTO1) evm_27.TU.AmTr_v1.0_scaffold00001.171 0.8497770429659078 79 AMTR_s00012p00241210 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.216 0.8493821879798178 96 AMTR_s00022p00127970 evm_27.TU.AmTr_v1.0_scaffold00022.120 0.846223867912074 75 AMTR_s00053p00151810 Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.99 0.8461321713484302 76 AMTR_s00030p00246840 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate degradation.nitrilase NIT4, AtNIT4, evm_27.TU.AmTr_v1.0_scaffold00030.227 0.8437433746413796 79 AMTR_s00059p00170510 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS9 component TWN3, RPS9, evm_27.TU.AmTr_v1.0_scaffold00059.166 0.841910060253543 81 AMTR_s00055p00214450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase EMB86, EMB1030, EMB263, evm_27.TU.AmTr_v1.0_scaffold00055.161 0.8374878827155803 94 AMTR_s00100p00127450 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00100.46 0.8369222619445208 95 AMTR_s00032p00079260 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.51 0.8357017618962852 99