Sequence Description Alias PCC hrr AMTR_s00038p00175390 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00038.116 0.9534110851197202 1 AMTR_s00038p00126350 Short integuments 2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.70 0.919723508857022 2 AMTR_s00113p00125330 Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana CID12, ATRBP37, RBP37, evm_27.TU.AmTr_v1.0_scaffold00113.27 0.9103193106314292 3 AMTR_s00039p00046970 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.SUVH2/9 methyl-DNA-binding factor SET22, SDG22, SUVH9, evm_27.TU.AmTr_v1.0_scaffold00039.17 0.9041544355505857 4 AMTR_s00003p00209480 Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.198 0.9029261003063533 10 AMTR_s00142p00098170 DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA repair protein (XRCC1) ATXRCC1, evm_27.TU.AmTr_v1.0_scaffold00142.64 0.8993060159062163 6 AMTR_s00041p00045860 Protein root UVB sensitive 4 OS=Arabidopsis thaliana RUS4, evm_27.TU.AmTr_v1.0_scaffold00041.19 0.895376947919489 7 AMTR_s00039p00011800 Protein PIR OS=Arabidopsis thaliana SRA1, KLK, PIR, ATSRA1, PIRP, PIR121, evm_27.TU.AmTr_v1.0_scaffold00039.1 0.8947800268090517 8 AMTR_s00010p00237160 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.289 0.8918721959639657 9 AMTR_s00022p00062370 evm_27.TU.AmTr_v1.0_scaffold00022.41 0.891592166310315 12 AMTR_s00093p00102680 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26c component evm_27.TU.AmTr_v1.0_scaffold00093.33 0.8893001027257906 22 AMTR_s00051p00012470 Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana ATGRX4, GRX4, evm_27.TU.AmTr_v1.0_scaffold00051.2 0.8847090937606928 12 AMTR_s00008p00095900 evm_27.TU.AmTr_v1.0_scaffold00008.34 0.8842147977496035 13 AMTR_s00020p00243160 evm_27.TU.AmTr_v1.0_scaffold00020.110 0.8783675424280133 20 AMTR_s00038p00032640 evm_27.TU.AmTr_v1.0_scaffold00038.12 0.8767705186824895 15 AMTR_s00041p00194980 DNA damage response.BRCC DNA-damage response complex.BRCC45 component evm_27.TU.AmTr_v1.0_scaffold00041.172 0.8755803741754722 16 AMTR_s00044p00115050 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.OST1 component evm_27.TU.AmTr_v1.0_scaffold00044.89 0.8747960787916095 17 AMTR_s00045p00203370 evm_27.TU.AmTr_v1.0_scaffold00045.268 0.8722537842424012 26 AMTR_s00061p00156200 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL11 component MRPL11, evm_27.TU.AmTr_v1.0_scaffold00061.143 0.868659186049702 31 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.8657753315306923 81 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component TIF3H1, evm_27.TU.AmTr_v1.0_scaffold00087.43 0.8647873081150365 61 AMTR_s00029p00164640 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.212 0.8646868001383204 22 AMTR_s00106p00102120 Chaperone protein dnaJ 13 OS=Arabidopsis thaliana OWL1, evm_27.TU.AmTr_v1.0_scaffold00106.72 0.8636145614604906 36 AMTR_s00047p00230470 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00047.197 0.8603466202556302 25 AMTR_s00049p00182420 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE1 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00049.177 0.859357934842961 34 AMTR_s00004p00168920 Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.187 0.8589747715503112 91 AMTR_s00129p00124210 RNA biosynthesis.transcriptional activation.bHLH transcription factor LRL1, evm_27.TU.AmTr_v1.0_scaffold00129.99 0.8582138945006975 66 AMTR_s00002p00108330 evm_27.TU.AmTr_v1.0_scaffold00002.66 0.8572717579160195 29 AMTR_s00006p00244250 Chromatin organisation.histone modifications.histone deacetylation.SIR2 histone deacetylase SRT1, evm_27.TU.AmTr_v1.0_scaffold00006.124 0.8563596374906505 30 AMTR_s00146p00068870 UBP1-associated proteins 1C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00146.41 0.855930650428383 65 AMTR_s00072p00050030 E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.18 0.8558325911575044 32 AMTR_s00071p00094030 MEE21, evm_27.TU.AmTr_v1.0_scaffold00071.69 0.855334545874625 81 AMTR_s00041p00224610 evm_27.TU.AmTr_v1.0_scaffold00041.259 0.8553337647741494 34 AMTR_s00016p00019360 evm_27.TU.AmTr_v1.0_scaffold00016.6 0.8550741491948495 45 AMTR_s00002p00174540 Calcineurin B-like protein 1 OS=Arabidopsis thaliana ATCBL1, CBL1, SCABP5, evm_27.TU.AmTr_v1.0_scaffold00002.147 0.8550353967628306 36 AMTR_s00009p00267300 evm_27.TU.AmTr_v1.0_scaffold00009.404 0.8525915456316913 43 AMTR_s00004p00269230 Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica ATPDI12, PDI12, PDIL5-3, ATPDIL5-3, evm_27.TU.AmTr_v1.0_scaffold00004.280 0.852308958767265 38 AMTR_s00012p00240300 evm_27.TU.AmTr_v1.0_scaffold00012.213 0.8516357832051765 60 AMTR_s00010p00236280 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.284 0.8509203462681989 40 AMTR_s00025p00131710 Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.130 0.8487694443223764 42 AMTR_s00045p00208290 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.281 0.8478595788621563 75 AMTR_s00039p00015870 Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.PIROGI component SRA1, KLK, PIR, ATSRA1, PIRP, PIR121, evm_27.TU.AmTr_v1.0_scaffold00039.2 0.8478218148496038 67 AMTR_s00005p00135530 Protein modification.hydroxylation.prolyl hydroxylase AT-P4H-1, evm_27.TU.AmTr_v1.0_scaffold00005.43 0.8463623849887444 53 AMTR_s02167p00005080 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02167.1 0.8431603874330946 49 AMTR_s00006p00260920 evm_27.TU.AmTr_v1.0_scaffold00006.225 0.8429657723834555 50 AMTR_s00045p00197400 evm_27.TU.AmTr_v1.0_scaffold00045.254 0.8428134672122375 51 AMTR_s00006p00267780 evm_27.TU.AmTr_v1.0_scaffold00006.304 0.8418188222843019 64 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.8413268480474847 84 AMTR_s00146p00051060 evm_27.TU.AmTr_v1.0_scaffold00146.26 0.8392252076765926 55 AMTR_s00045p00170740 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP3 component evm_27.TU.AmTr_v1.0_scaffold00045.203 0.8392136149636084 91 AMTR_s00078p00041370 Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.17 0.837519097361105 59 AMTR_s00010p00250780 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00010.356 0.8371996987987252 60 AMTR_s00137p00066590 Cell wall.pectin.homogalacturonan.synthesis.CGR-type methyltransferase evm_27.TU.AmTr_v1.0_scaffold00137.28 0.8368269463290662 61 AMTR_s00011p00244680 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana RUS1, evm_27.TU.AmTr_v1.0_scaffold00011.142 0.8351175774591728 63 AMTR_s00057p00197800 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS20 component VPS20.2, evm_27.TU.AmTr_v1.0_scaffold00057.225 0.8346845394176822 64 AMTR_s00119p00121460 Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.95 0.8337126888927582 65 AMTR_s00079p00103020 evm_27.TU.AmTr_v1.0_scaffold00079.36 0.8336847572229693 66 AMTR_s00029p00247460 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate synthase DHDPS2, evm_27.TU.AmTr_v1.0_scaffold00029.446 0.8278908099377059 69 AMTR_s00114p00120500 evm_27.TU.AmTr_v1.0_scaffold00114.53 0.8270874801771374 97 AMTR_s00010p00225250 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.249 0.8267686740154121 96 AMTR_s00010p00225430 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.250 0.8267686740154121 96 AMTR_s00065p00153390 evm_27.TU.AmTr_v1.0_scaffold00065.108 0.825273527480328 74 AMTR_s00111p00149430 Diacylglycerol O-acyltransferase 2D OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00111.134 0.8238125820272096 76 AMTR_s00067p00044400 evm_27.TU.AmTr_v1.0_scaffold00067.24 0.8236698613886169 95 AMTR_s00010p00236550 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.285 0.8222392998582353 80 AMTR_s00053p00199490 RNA processing.RNA 5-end cap adding.mRNA cap methyltransferase evm_27.TU.AmTr_v1.0_scaffold00053.152 0.821960098158599 81 AMTR_s00165p00048390 evm_27.TU.AmTr_v1.0_scaffold00165.28 0.8201666456975307 83 AMTR_s00067p00125830 evm_27.TU.AmTr_v1.0_scaffold00067.106 0.8200033168149822 95 AMTR_s00010p00239860 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.300 0.8193867302540606 86 AMTR_s00016p00219790 evm_27.TU.AmTr_v1.0_scaffold00016.200 0.8192483593959945 87 AMTR_s00088p00119450 Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.84 0.8188391062282933 88 AMTR_s00003p00114270 Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana CER8, LACS1, evm_27.TU.AmTr_v1.0_scaffold00003.80 0.8181894487210829 89 AMTR_s00011p00253040 Sodium/hydrogen exchanger 6 OS=Arabidopsis thaliana ATNHX6, NHX6, evm_27.TU.AmTr_v1.0_scaffold00011.160 0.8171796552506935 90 AMTR_s00088p00173270 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-WNK kinase evm_27.TU.AmTr_v1.0_scaffold00088.148 0.8154808161058581 94 AMTR_s00010p00247540 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL7/L12 component evm_27.TU.AmTr_v1.0_scaffold00010.338 0.8150297395449181 96 AMTR_s00044p00070480 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase UGP2, AtUGP2, evm_27.TU.AmTr_v1.0_scaffold00044.42 0.8132580197515763 97