Sequence Description Alias PCC hrr AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP7, evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9462964784113627 4 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2, evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9442750984237057 4 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1, evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9391053531604749 12 AMTR_s00022p00114710 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507, evm_27.TU.AmTr_v1.0_scaffold00022.105 0.9380921774457031 4 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14, evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9373861005989719 18 AMTR_s00092p00098010 ATILP1, ILP1, evm_27.TU.AmTr_v1.0_scaffold00092.55 0.9303918570160749 6 AMTR_s00063p00197920 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.78 0.9294966742572704 7 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9289763478757586 22 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2, evm_27.TU.AmTr_v1.0_scaffold00138.19 0.928955156924316 27 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.9288725731270678 21 AMTR_s00119p00021560 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.5 0.9280068515952283 11 AMTR_s00025p00184490 evm_27.TU.AmTr_v1.0_scaffold00025.223 0.9278449787687134 12 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B GYRB1, evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9247620598989602 17 AMTR_s00061p00131900 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component VCS, evm_27.TU.AmTr_v1.0_scaffold00061.110 0.9229894848556315 21 AMTR_s00046p00168380 Flowering time control protein FCA OS=Arabidopsis thaliana FCA, evm_27.TU.AmTr_v1.0_scaffold00046.92 0.9228336809925726 15 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme NAD-ME1, evm_27.TU.AmTr_v1.0_scaffold00002.109 0.922789428231399 22 AMTR_s00148p00090060 Helicase protein MOM1 OS=Arabidopsis thaliana MOM1, MOM, evm_27.TU.AmTr_v1.0_scaffold00148.61 0.9227390438421285 17 AMTR_s00020p00207770 evm_27.TU.AmTr_v1.0_scaffold00020.85 0.9221933964246309 18 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.921978354896389 25 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9208368879675003 20 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2, evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9206081754619186 36 AMTR_s00138p00108220 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component evm_27.TU.AmTr_v1.0_scaffold00138.52 0.9187301088775056 36 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9179419986999859 38 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9178674069401894 76 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9170664533071138 37 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit MPPBETA, evm_27.TU.AmTr_v1.0_scaffold00064.89 0.9161171720790595 26 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9159139219156073 57 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9151742292760672 73 AMTR_s00029p00243460 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX-type) RCI4, CAX1, ATCAX1, evm_27.TU.AmTr_v1.0_scaffold00029.427 0.9145552008012241 29 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9142331444372065 30 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.9136059050608225 31 AMTR_s00036p00235910 evm_27.TU.AmTr_v1.0_scaffold00036.181 0.9131273337218848 32 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.9117812342742788 33 AMTR_s00088p00046280 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.24 0.9113016722536149 34 AMTR_s00066p00089100 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA, evm_27.TU.AmTr_v1.0_scaffold00066.69 0.910954077751908 75 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit UVH6, ATXPD, evm_27.TU.AmTr_v1.0_scaffold00025.17 0.9102627689426495 41 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2, evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9096708464794929 42 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9090360372513924 76 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.908999521547563 54 AMTR_s00091p00075810 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00091.25 0.9072222981522002 42 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.9060575180995035 43 AMTR_s00059p00074580 evm_27.TU.AmTr_v1.0_scaffold00059.49 0.9053714935209896 45 AMTR_s00061p00204480 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1 0.9037445683591451 46 AMTR_s00096p00094010 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DRM2 de novo DNA methylase DRM2, DMT7, evm_27.TU.AmTr_v1.0_scaffold00096.44 0.9022240570688062 47 AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor VSR2;2, ATVSR3, BP80-2;2, VSR3, evm_27.TU.AmTr_v1.0_scaffold00164.25 0.9022018532954066 48 AMTR_s00053p00219090 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO chain-forming-ligase E4 enzyme (PIAL) evm_27.TU.AmTr_v1.0_scaffold00053.172 0.902053816514503 49 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.9017130931690243 50 AMTR_s00165p00040130 evm_27.TU.AmTr_v1.0_scaffold00165.22 0.9011804401480012 52 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.900924704996756 53 AMTR_s00047p00208850 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1, evm_27.TU.AmTr_v1.0_scaffold00047.148 0.9004924040666195 55 AMTR_s00010p00263000 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSII-type starch synthase SS2, AtSS2, evm_27.TU.AmTr_v1.0_scaffold00010.483 0.8992711729372991 56 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor At-RSZ22a, RSZ22a, evm_27.TU.AmTr_v1.0_scaffold00019.143 0.8989085189131139 57 AMTR_s00004p00261460 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.256 0.8988741442950907 90 AMTR_s00062p00192260 Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.NAP1 component NAPP, GRL, NAP1, evm_27.TU.AmTr_v1.0_scaffold00062.201 0.8984225006698424 77 AMTR_s00049p00181100 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor REF6, evm_27.TU.AmTr_v1.0_scaffold00049.175 0.8981648184174561 60 AMTR_s00069p00133460 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1, evm_27.TU.AmTr_v1.0_scaffold00069.97 0.8981222747342822 100 AMTR_s00018p00254940 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.167 0.8961489160504438 64 AMTR_s00108p00104150 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-9, evm_27.TU.AmTr_v1.0_scaffold00108.20 0.8959557475208941 65 AMTR_s00099p00155770 Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.150 0.895826084274861 66 AMTR_s00071p00142490 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein UPF1, ATUPF1, LBA1, evm_27.TU.AmTr_v1.0_scaffold00071.128 0.8955861684313068 67 AMTR_s00003p00269470 evm_27.TU.AmTr_v1.0_scaffold00003.408 0.895487013678045 69 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA2, KEA2, evm_27.TU.AmTr_v1.0_scaffold00009.318 0.8954468584842338 100 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.8954039027917213 100 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.8953821034727681 99 AMTR_s00058p00069070 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor AGO7, ZIP, evm_27.TU.AmTr_v1.0_scaffold00058.31 0.8941607919863747 76 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.8941521466493371 77 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3, evm_27.TU.AmTr_v1.0_scaffold00076.20 0.893604921667547 91 AMTR_s00078p00181940 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00078.179 0.8934675497134908 83 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8926154126943694 86 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 NRPA1, evm_27.TU.AmTr_v1.0_scaffold00022.362 0.8923690357914165 88 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.8919247764963563 90 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase TADA, ATTADA, evm_27.TU.AmTr_v1.0_scaffold00029.309 0.8914293289243045 97 AMTR_s00099p00056810 evm_27.TU.AmTr_v1.0_scaffold00099.39 0.8913736540939556 94 AMTR_s00018p00074980 RNA biosynthesis.transcriptional activation.NAC transcription factor anac045, NAC045, evm_27.TU.AmTr_v1.0_scaffold00018.28 0.8902746173837562 99