Sequence Description Alias PCC hrr AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.9329557913842355 5 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase GPS1, GPPS, evm_27.TU.AmTr_v1.0_scaffold00092.58 0.9254483499005488 3 AMTR_s00022p00149810 AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.146 0.9247971017740642 3 AMTR_s00133p00094810 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00133.41 0.9234835809643006 4 AMTR_s00092p00170280 evm_27.TU.AmTr_v1.0_scaffold00092.155 0.9232685315693062 5 AMTR_s00016p00217220 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM, evm_27.TU.AmTr_v1.0_scaffold00016.194 0.9205622964990885 6 AMTR_s00009p00247290 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase evm_27.TU.AmTr_v1.0_scaffold00009.243 0.9153611353601098 12 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana MIRO1, emb2473, evm_27.TU.AmTr_v1.0_scaffold00003.6 0.9147386563740212 62 AMTR_s00067p00020220 Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana RUS2, WXR1, evm_27.TU.AmTr_v1.0_scaffold00067.5 0.9140502495171683 9 AMTR_s00066p00096020 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) GDI2, ATGDI2, evm_27.TU.AmTr_v1.0_scaffold00066.78 0.9126786366368221 19 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9096899794003083 37 AMTR_s00114p00022520 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00114.8 0.9031173777816027 55 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.9028748161011855 36 AMTR_s00060p00168860 Amino acid metabolism.biosynthesis.aspartate family.asparagine.glutamine-dependent asparagine synthetase ASN2, evm_27.TU.AmTr_v1.0_scaffold00060.105 0.9028443520266118 14 AMTR_s00101p00151570 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL4 component evm_27.TU.AmTr_v1.0_scaffold00101.126 0.9024115122452165 15 AMTR_s00041p00191400 Protein MAEA homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.164 0.9015659766608106 16 AMTR_s00010p00071580 evm_27.TU.AmTr_v1.0_scaffold00010.43 0.8998142814054685 17 AMTR_s00067p00073150 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA13 component evm_27.TU.AmTr_v1.0_scaffold00067.49 0.8985312783150061 18 AMTR_s00170p00040980 Cellular respiration.pyruvate oxidation.mitochondrial pyruvate dehydrogenase complex.E2 component evm_27.TU.AmTr_v1.0_scaffold00170.18 0.8969851092732327 19 AMTR_s00177p00032620 Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.11 0.8969055691187624 64 AMTR_s00340p00012500 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00340.2 0.896596266581429 21 AMTR_s00066p00171460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-beta component EIF2 BETA, EMB1401, evm_27.TU.AmTr_v1.0_scaffold00066.200 0.8948517215046943 22 AMTR_s00046p00200010 evm_27.TU.AmTr_v1.0_scaffold00046.127 0.894525461370284 23 AMTR_s00103p00063820 Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana AXR4, RGR, RGR1, evm_27.TU.AmTr_v1.0_scaffold00103.32 0.8945027496981683 24 AMTR_s00068p00197380 Actin-related protein 4 OS=Arabidopsis thaliana ARP4, ATARP4, evm_27.TU.AmTr_v1.0_scaffold00068.162 0.8933311686410745 25 AMTR_s00001p00035420 Amino acid metabolism.biosynthesis.serine family.cysteine.serine O-acetyltransferase (SAT) SERAT3;2, ATSERAT3;2, evm_27.TU.AmTr_v1.0_scaffold00001.18 0.8924865300364554 26 AMTR_s00110p00066820 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit MPPBETA, evm_27.TU.AmTr_v1.0_scaffold00110.31 0.8913370327503508 27 AMTR_s00056p00180950 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00056.160 0.8904848876734968 28 AMTR_s00080p00172720 evm_27.TU.AmTr_v1.0_scaffold00080.89 0.8871646225437485 29 AMTR_s00001p00157430 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00001.144 0.8871573665673117 30 AMTR_s00099p00085080 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.64 0.8853243809813773 31 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.884571325829438 77 AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.8844778797400625 35 AMTR_s00003p00111200 Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.77 0.8833644383913325 34 AMTR_s00033p00221090 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor ZML2, GATA28, TIFY2A, evm_27.TU.AmTr_v1.0_scaffold00033.200 0.8831552555195539 35 AMTR_s01740p00001560 evm_27.TU.AmTr_v1.0_scaffold01740.1 0.8823957618070101 37 AMTR_s00009p00263810 Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana ACBP2, evm_27.TU.AmTr_v1.0_scaffold00009.362 0.8802659950303643 48 AMTR_s00045p00078520 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VIII kinase families.RLCK-VIII kinase evm_27.TU.AmTr_v1.0_scaffold00045.69 0.8802360052617895 42 AMTR_s00032p00029730 Alpha N-terminal protein methyltransferase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.11 0.8799461022240311 43 AMTR_s00039p00218660 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA9 component evm_27.TU.AmTr_v1.0_scaffold00039.189 0.8798224025402653 61 AMTR_s00086p00025730 Protoheme IX farnesyltransferase, mitochondrial OS=Arabidopsis thaliana COX10, evm_27.TU.AmTr_v1.0_scaffold00086.8 0.8782235012197795 46 AMTR_s00070p00156670 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-B cofactor evm_27.TU.AmTr_v1.0_scaffold00070.100 0.8780073783366932 47 AMTR_s00058p00175640 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta ERA1, ATFTB, WIG, evm_27.TU.AmTr_v1.0_scaffold00058.165 0.8775689876351721 51 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.8773422781042535 52 AMTR_s00049p00109690 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.delta subunit evm_27.TU.AmTr_v1.0_scaffold00049.85 0.8773028415259815 53 AMTR_s00003p00264450 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00003.360 0.87670219435182 56 AMTR_s00088p00117460 Multi-process regulation.Rop GTPase regulatory system.Rop small GTPase ATRAC8, ATROP10, ROP10, ARAC8, evm_27.TU.AmTr_v1.0_scaffold00088.83 0.8765936434324715 57 AMTR_s00017p00169940 BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.84 0.8765585002636787 58 AMTR_s00098p00093790 evm_27.TU.AmTr_v1.0_scaffold00098.21 0.8763771796480316 59 AMTR_s00002p00272210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM82 component AtTRM82, TRM82, evm_27.TU.AmTr_v1.0_scaffold00002.672 0.8758364335230134 61 AMTR_s00059p00160430 Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.147 0.8754597283412362 62 AMTR_s00175p00030950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor TKI1, evm_27.TU.AmTr_v1.0_scaffold00175.7 0.8753805652885254 63 AMTR_s00019p00249880 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.ArpC3 component ARPC3, evm_27.TU.AmTr_v1.0_scaffold00019.405 0.8747166832102214 65 AMTR_s00171p00060310 Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00171.44 0.8733453759809637 68 AMTR_s00149p00039360 External stimuli response.biotic stress.tobamovirus multiplication.TOM2A replication host factor TOM2A, evm_27.TU.AmTr_v1.0_scaffold00149.15 0.8727702942747894 69 AMTR_s00025p00026830 evm_27.TU.AmTr_v1.0_scaffold00025.11 0.8727080293716614 70 AMTR_s00057p00137940 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase MEE32, EMB3004, evm_27.TU.AmTr_v1.0_scaffold00057.122 0.8726481851702536 71 AMTR_s00025p00164280 Protein degradation.ER-associated protein degradation (ERAD) machinery.EBS7 plant-specific component evm_27.TU.AmTr_v1.0_scaffold00025.189 0.8719017586027635 74 AMTR_s00022p00147990 Cell wall.pectin.rhamnogalacturonan II.synthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) synthesis.CMP-KDO synthetase KDSB, evm_27.TU.AmTr_v1.0_scaffold00022.144 0.8716333885105195 76 AMTR_s00045p00104390 Lipid metabolism.lipid transport.plastidial lipid import.TGD4 lipid trafficking cofactor TGD4, PDE320, evm_27.TU.AmTr_v1.0_scaffold00045.97 0.8714774572284242 77 AMTR_s00024p00073390 Calmodulin OS=Solanum lycopersicum CAM3, acam-3, evm_27.TU.AmTr_v1.0_scaffold00024.32 0.8713761013118838 78 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.870830761650643 85 AMTR_s00002p00272060 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm8 component evm_27.TU.AmTr_v1.0_scaffold00002.659 0.870744619511405 80 AMTR_s00022p00213770 evm_27.TU.AmTr_v1.0_scaffold00022.253 0.8706710429927399 81 AMTR_s00049p00056110 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP72 component evm_27.TU.AmTr_v1.0_scaffold00049.32 0.87065060013757 82 AMTR_s00078p00083100 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component evm_27.TU.AmTr_v1.0_scaffold00078.56 0.8705493868388013 83 AMTR_s00124p00115680 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.beta subcomplex.NDUFB8 component evm_27.TU.AmTr_v1.0_scaffold00124.24 0.870012648382264 84 AMTR_s00071p00107830 Cell wall.hemicellulose.xylan.synthesis.glucuronosyltransferase activities.GUX-type glucuronosyltransferase PGSIP1, GUX1, evm_27.TU.AmTr_v1.0_scaffold00071.82 0.8693033179711186 87 AMTR_s00001p00273050 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component evm_27.TU.AmTr_v1.0_scaffold00001.589 0.8686909036256915 89 AMTR_s00019p00076100 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP43 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00019.53 0.8685797368362081 90 AMTR_s00022p00121950 Cellular respiration.glycolysis.cytosolic glycolysis.phosphofructokinase activities.pyrophosphate-dependent phosphofructokinase evm_27.TU.AmTr_v1.0_scaffold00022.114 0.8683102725136396 91 AMTR_s00133p00010820 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond evm_27.TU.AmTr_v1.0_scaffold00133.1 0.8682608744211125 92 AMTR_s00008p00163370 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component evm_27.TU.AmTr_v1.0_scaffold00008.84 0.8675841562791533 93 AMTR_s00013p00234340 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG2 component evm_27.TU.AmTr_v1.0_scaffold00013.186 0.866861159570388 95 AMTR_s00041p00192380 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00041.165 0.8667776545074427 97 AMTR_s00066p00189030 F-box protein SKIP16 OS=Arabidopsis thaliana SKIP16, evm_27.TU.AmTr_v1.0_scaffold00066.239 0.8664835613156483 99