Sequence Description Alias PCC hrr AMTR_s00002p00065920 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.IBA57 component evm_27.TU.AmTr_v1.0_scaffold00002.29 0.9574691296091191 1 AMTR_s00005p00164560 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b evm_27.TU.AmTr_v1.0_scaffold00005.50 0.8968995022723262 2 AMTR_s00171p00027510 evm_27.TU.AmTr_v1.0_scaffold00171.5 0.8951195981591499 13 AMTR_s00069p00071970 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component FRD4, CPFTSY, evm_27.TU.AmTr_v1.0_scaffold00069.43 0.8951039680483673 4 AMTR_s00010p00258750 Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.418 0.8881142565173299 5 AMTR_s00002p00270380 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.OTP86 RNA editing factor OTP86, evm_27.TU.AmTr_v1.0_scaffold00002.581 0.8821474821421101 6 AMTR_s00025p00178360 evm_27.TU.AmTr_v1.0_scaffold00025.214 0.8783249471024552 7 AMTR_s00011p00235260 Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris evm_27.TU.AmTr_v1.0_scaffold00011.124 0.8761278706625149 8 AMTR_s00016p00175490 Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.134 0.874373939994982 9 AMTR_s00019p00176530 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.diacylglycerol kinase DGK7, ATDGK7, evm_27.TU.AmTr_v1.0_scaffold00019.178 0.8714402186275975 18 AMTR_s00051p00118520 evm_27.TU.AmTr_v1.0_scaffold00051.46 0.8692653751982441 11 AMTR_s00010p00265430 evm_27.TU.AmTr_v1.0_scaffold00010.511 0.865115177543492 82 AMTR_s00110p00036260 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EDL component EDL2, evm_27.TU.AmTr_v1.0_scaffold00110.10 0.8642241647816108 13 AMTR_s00058p00045920 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein LPA2, evm_27.TU.AmTr_v1.0_scaffold00058.17 0.8588328120876533 14 AMTR_s00066p00053070 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp3 assembly factor evm_27.TU.AmTr_v1.0_scaffold00066.28 0.8587229968742285 15 AMTR_s00039p00231550 Nucleotide-sugar uncharacterized transporter 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.219 0.8573984856165642 16 AMTR_s00111p00036140 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase RDO4, HUB1, evm_27.TU.AmTr_v1.0_scaffold00111.18 0.8572323654937266 39 AMTR_s00028p00084470 evm_27.TU.AmTr_v1.0_scaffold00028.22 0.8549163536036192 18 AMTR_s00143p00029240 evm_27.TU.AmTr_v1.0_scaffold00143.4 0.8515793502235267 31 AMTR_s00069p00134710 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) evm_27.TU.AmTr_v1.0_scaffold00069.98 0.850975519235712 21 AMTR_s00176p00036070 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter KUP6, evm_27.TU.AmTr_v1.0_scaffold00176.12 0.8501253520836038 30 AMTR_s00044p00064950 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG12-ATG5 ATG8-PE-ligase E3 dimer.ATG5 component APG5, ATATG5, ATG5, evm_27.TU.AmTr_v1.0_scaffold00044.36 0.8501033654326597 23 AMTR_s00002p00250530 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component ATB' BETA, evm_27.TU.AmTr_v1.0_scaffold00002.354 0.8430301376759962 44 AMTR_s00110p00061160 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.small subunit evm_27.TU.AmTr_v1.0_scaffold00110.27 0.8379261510698557 32 AMTR_s00095p00091650 CIP111, evm_27.TU.AmTr_v1.0_scaffold00095.53 0.8357037686879739 27 AMTR_s00100p00114870 evm_27.TU.AmTr_v1.0_scaffold00100.36 0.8315173700382279 28 AMTR_s00002p00265350 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 7 NRPE7, evm_27.TU.AmTr_v1.0_scaffold00002.496 0.8308286855221676 29 AMTR_s00095p00098050 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group IPT2, ATIPT2, IPPT, evm_27.TU.AmTr_v1.0_scaffold00095.58 0.8306001676372984 60 AMTR_s00029p00202610 evm_27.TU.AmTr_v1.0_scaffold00029.288 0.8291736187831291 31 AMTR_s00049p00131010 DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00049.108 0.8282111884795577 33 AMTR_s00068p00142730 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.HST homogentisate solanesyltransferase HST, ATHST, PDS2, evm_27.TU.AmTr_v1.0_scaffold00068.99 0.8251353385773441 34 AMTR_s00048p00130950 DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica STRS1, evm_27.TU.AmTr_v1.0_scaffold00048.76 0.8220440756672442 35 AMTR_s00070p00199980 Cell cycle.organelle machineries.DNA replication.RNA primer removal.plastidial exonuclease evm_27.TU.AmTr_v1.0_scaffold00070.135 0.8212847233969187 57 AMTR_s00135p00092810 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.N-succinyl 5-aminoimidazole-4-carboxamide RN synthase PUR7, PURC, ATPURC, evm_27.TU.AmTr_v1.0_scaffold00135.51 0.8182019625124242 37 AMTR_s00010p00178800 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.assembly.HCC/SCO1 component evm_27.TU.AmTr_v1.0_scaffold00010.145 0.8172677401222641 57 AMTR_s00095p00040100 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component evm_27.TU.AmTr_v1.0_scaffold00095.18 0.8170634903283229 45 AMTR_s00079p00138710 evm_27.TU.AmTr_v1.0_scaffold00079.57 0.8154406854415053 43 AMTR_s00095p00145390 Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.112 0.811604504030985 44 AMTR_s00066p00161620 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00066.172 0.8104537854080536 45 AMTR_s00038p00202410 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE3 component evm_27.TU.AmTr_v1.0_scaffold00038.151 0.8089504409636374 48 AMTR_s00079p00168130 Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00079.80 0.8053531681000922 51 AMTR_s00017p00245450 PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.230 0.8020311057680168 55 AMTR_s00047p00072890 Protein modification.N-linked glycosylation.complex N-glycan maturation.GnT-II-type N-acetylglucosaminyltransferase evm_27.TU.AmTr_v1.0_scaffold00047.16 0.800925720442764 59 AMTR_s00076p00102070 Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.28 0.7997917686818157 60 AMTR_s00041p00201270 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ROC3, evm_27.TU.AmTr_v1.0_scaffold00041.182 0.7996637744369142 67 AMTR_s00055p00152980 NPQ6, evm_27.TU.AmTr_v1.0_scaffold00055.69 0.7985001946529666 62 AMTR_s00029p00065560 evm_27.TU.AmTr_v1.0_scaffold00029.62 0.7968913267697817 63 AMTR_s00077p00145960 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-C component NAP7, ATNAP7, evm_27.TU.AmTr_v1.0_scaffold00077.146 0.7941859442475414 64 AMTR_s00025p00096270 evm_27.TU.AmTr_v1.0_scaffold00025.78 0.7930128774237991 65 AMTR_s00066p00114140 evm_27.TU.AmTr_v1.0_scaffold00066.105 0.792371955326301 66 AMTR_s00010p00055380 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.assembly phase.TAH18 component evm_27.TU.AmTr_v1.0_scaffold00010.28 0.7919621085337104 67 AMTR_s00001p00257570 Protein modification.phosphorylation.IRE bifunctional protein kinase and mRNA endoribonuclease IRE1-2, ATIRE1-2, IRE1A, evm_27.TU.AmTr_v1.0_scaffold00001.350 0.7917407906309145 69 AMTR_s00042p00156780 Protein arginine N-methyltransferase PRMT10 OS=Oryza sativa subsp. indica PRMT10, ATPRMT10, evm_27.TU.AmTr_v1.0_scaffold00042.43 0.7903899107572558 70 AMTR_s00036p00106140 evm_27.TU.AmTr_v1.0_scaffold00036.41 0.788524062765229 74 AMTR_s00037p00235640 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component EIF3B-2, ATEIF3B-2, EIF3B, evm_27.TU.AmTr_v1.0_scaffold00037.156 0.7869814711411224 73 AMTR_s00066p00149360 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS39 HOPS-specific component EMB2754, evm_27.TU.AmTr_v1.0_scaffold00066.151 0.783056134012738 91 AMTR_s00030p00165030 BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.102 0.7814173506813956 77 AMTR_s00022p00235920 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm7 component evm_27.TU.AmTr_v1.0_scaffold00022.326 0.7808681072216193 82 AMTR_s00052p00087310 evm_27.TU.AmTr_v1.0_scaffold00052.23 0.7807356914250011 79 AMTR_s00010p00245480 Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.327 0.7804190609491686 80 AMTR_s00010p00227020 evm_27.TU.AmTr_v1.0_scaffold00010.254 0.7751394561426478 87 AMTR_s00003p00230260 evm_27.TU.AmTr_v1.0_scaffold00003.227 0.7711462051415948 91 AMTR_s00033p00241730 evm_27.TU.AmTr_v1.0_scaffold00033.260 0.7677418033024539 97 AMTR_s00029p00215750 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.323 0.7646744443976078 99 AMTR_s00056p00104010 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00056.76 0.7644402263650878 100