Sequence Description Alias PCC hrr AMTR_s00049p00049960 ABC transporter F family member 4 OS=Arabidopsis thaliana ATGCN4, GCN4, evm_27.TU.AmTr_v1.0_scaffold00049.22 0.8704526234581598 1 AMTR_s00044p00204550 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear lamina.CRWN lamin-like protein LINC4, evm_27.TU.AmTr_v1.0_scaffold00044.217 0.8659096029656373 9 AMTR_s00140p00087970 RNA biosynthesis.transcriptional activation.NAC transcription factor anac078, NAC2, evm_27.TU.AmTr_v1.0_scaffold00140.39 0.8646092436502565 5 AMTR_s00044p00086850 evm_27.TU.AmTr_v1.0_scaffold00044.59 0.8537610954505066 4 AMTR_s00165p00079470 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1 phosphatase TOPP4, evm_27.TU.AmTr_v1.0_scaffold00165.51 0.8524845673346994 10 AMTR_s00002p00272130 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.CDC73/PHP component CDC73, PHP, evm_27.TU.AmTr_v1.0_scaffold00002.665 0.8506543043627824 8 AMTR_s00049p00226580 evm_27.TU.AmTr_v1.0_scaffold00049.273 0.8427713187152445 20 AMTR_s00071p00019220 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase MAP3KA, MAPKKK3, evm_27.TU.AmTr_v1.0_scaffold00071.8 0.838003878844606 8 AMTR_s00017p00252560 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP7 group protein ATSYP71, SYP71, evm_27.TU.AmTr_v1.0_scaffold00017.259 0.8360179027147508 17 AMTR_s00095p00122180 Protein modification.protein folding and quality control.RAC ribosome-associated chaperone complex.ZRF Hsp40-chaperone component evm_27.TU.AmTr_v1.0_scaffold00095.75 0.8351400460280732 25 AMTR_s00045p00124580 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.122 0.8314544510732713 14 AMTR_s00051p00095080 Cactin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00051.40 0.8293991067089111 72 AMTR_s00061p00100880 KH domain-containing protein At5g56140 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.77 0.8272697872475961 13 AMTR_s00029p00156590 RNA processing.RNA modification.rRNA/tRNA methylation.DIM1A-type rRNA adenosine dimethylase evm_27.TU.AmTr_v1.0_scaffold00029.186 0.8230167488654139 91 AMTR_s00067p00163830 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.MRG histone H3K4/H3K36 methylation reader evm_27.TU.AmTr_v1.0_scaffold00067.165 0.8226829205011548 53 AMTR_s00070p00192400 Amino acid metabolism.biosynthesis.serine family.glycine.serine hydroxymethyltransferase SHM7, evm_27.TU.AmTr_v1.0_scaffold00070.125 0.8203409002175676 35 AMTR_s00077p00038730 Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.20 0.8185683533413662 50 AMTR_s00013p00198120 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component ATEXO70F1, EXO70F1, evm_27.TU.AmTr_v1.0_scaffold00013.132 0.8148836135816229 80 AMTR_s00003p00042000 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.Sar1-type GTPase SAR2, ATSARA1C, ATSAR2, ASAR1, evm_27.TU.AmTr_v1.0_scaffold00003.24 0.8145496863236089 19 AMTR_s00033p00206070 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase CRCK3, evm_27.TU.AmTr_v1.0_scaffold00033.177 0.8138886340802 20 AMTR_s00022p00216890 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor SLIM1, ATSLIM, AtEIL3, EIL3, evm_27.TU.AmTr_v1.0_scaffold00022.260 0.8123132940872011 33 AMTR_s00018p00240170 Protein modification.phosphorylation.CAMK kinase superfamily.CRK kinase CRK3, ATCRK3, evm_27.TU.AmTr_v1.0_scaffold00018.149 0.8064454227841886 48 AMTR_s00060p00203670 RNA biosynthesis.transcriptional activation.TIFY transcription factor JAI3, JAZ3, TIFY6B, evm_27.TU.AmTr_v1.0_scaffold00060.145 0.8043181371727941 24 AMTR_s00022p00094930 RNA biosynthesis.transcriptional activation.NAC transcription factor anac078, NAC2, evm_27.TU.AmTr_v1.0_scaffold00022.74 0.8016428653446521 28 AMTR_s00022p00124240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.pre-60S subunit nuclear export.NMD3 export factor evm_27.TU.AmTr_v1.0_scaffold00022.116 0.8015560122553598 35 AMTR_s00068p00196240 ECT8, evm_27.TU.AmTr_v1.0_scaffold00068.160 0.8007703027784433 67 AMTR_s00122p00015610 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component PDF2, evm_27.TU.AmTr_v1.0_scaffold00122.4 0.8000345558699357 40 AMTR_s00022p00247520 Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.370 0.7995752867396257 29 AMTR_s00060p00158750 evm_27.TU.AmTr_v1.0_scaffold00060.98 0.7958587673034908 78 AMTR_s00017p00191520 evm_27.TU.AmTr_v1.0_scaffold00017.111 0.7942117626738663 51 AMTR_s00154p00032290 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component ATEXO70F1, EXO70F1, evm_27.TU.AmTr_v1.0_scaffold00154.13 0.7935686056286985 40 AMTR_s00111p00076670 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IX kinase families.RLCK-IXb kinase evm_27.TU.AmTr_v1.0_scaffold00111.48 0.791490463639381 35 AMTR_s00162p00048220 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana CAD1, evm_27.TU.AmTr_v1.0_scaffold00162.23 0.7891241300340202 96 AMTR_s00032p00174160 COP1-interactive protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.147 0.788829154690254 44 AMTR_s00006p00249860 Protein biosynthesis.translation termination.eRF1 peptide release factor ERF1-3, evm_27.TU.AmTr_v1.0_scaffold00006.145 0.7866602484919414 41 AMTR_s00103p00147670 evm_27.TU.AmTr_v1.0_scaffold00103.105 0.7859378871540519 42 AMTR_s00109p00132970 Protein modification.phosphorylation.CK kinase superfamily.CKL protein kinase ckl3, evm_27.TU.AmTr_v1.0_scaffold00109.139 0.7832428617928905 77 AMTR_s00067p00087050 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B2-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00067.64 0.7797752530858825 58 AMTR_s00065p00071220 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component evm_27.TU.AmTr_v1.0_scaffold00065.37 0.779614224312468 57 AMTR_s00025p00147580 evm_27.TU.AmTr_v1.0_scaffold00025.164 0.7780054952334444 58 AMTR_s00010p00092340 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-1 kinase evm_27.TU.AmTr_v1.0_scaffold00010.51 0.7754867828689489 57 AMTR_s00133p00038030 evm_27.TU.AmTr_v1.0_scaffold00133.9 0.7741136653476264 58 AMTR_s00077p00100730 Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.83 0.7734432389740753 73 AMTR_s00095p00133680 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component CUL3B, ATCUL3B, evm_27.TU.AmTr_v1.0_scaffold00095.95 0.7711214261970515 63 AMTR_s00030p00202550 evm_27.TU.AmTr_v1.0_scaffold00030.141 0.7656379364804554 78 AMTR_s00040p00182900 evm_27.TU.AmTr_v1.0_scaffold00040.178 0.7653741379241362 70 AMTR_s00154p00085810 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster I phosphatase evm_27.TU.AmTr_v1.0_scaffold00154.54 0.7635701940292982 73 AMTR_s00003p00235130 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor QQT2, evm_27.TU.AmTr_v1.0_scaffold00003.237 0.7625811248441745 85 AMTR_s00002p00210460 evm_27.TU.AmTr_v1.0_scaffold00002.216 0.7621246177032738 81 AMTR_s00109p00141140 evm_27.TU.AmTr_v1.0_scaffold00109.151 0.7607798443815524 83 AMTR_s00067p00032430 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00067.15 0.7587826705274857 85 AMTR_s00002p00228700 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component evm_27.TU.AmTr_v1.0_scaffold00002.258 0.758720479997037 86 AMTR_s00086p00162440 Vesicle-associated protein 1-1 OS=Arabidopsis thaliana VAP27, VAP27-1, (AT)VAP, VAP, evm_27.TU.AmTr_v1.0_scaffold00086.100 0.7576386647538729 95 AMTR_s00209p00027350 evm_27.TU.AmTr_v1.0_scaffold00209.7 0.7569924657826579 90 AMTR_s00016p00242400 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP2-group protein SYP21, ATSYP21, PEP12, ATPEP12, PEP12P, evm_27.TU.AmTr_v1.0_scaffold00016.259 0.7550288111090317 94 AMTR_s00112p00127430 Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana PUX4, evm_27.TU.AmTr_v1.0_scaffold00112.34 0.7543718075630232 96 AMTR_s00002p00234950 Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana UBC18, evm_27.TU.AmTr_v1.0_scaffold00002.273 0.7543672798014163 97 AMTR_s00099p00096450 evm_27.TU.AmTr_v1.0_scaffold00099.75 0.7538502661756585 99 AMTR_s00033p00243240 Disease resistance protein ADR1 OS=Arabidopsis thaliana ADR1, evm_27.TU.AmTr_v1.0_scaffold00033.264 0.7538294514006408 100