Sequence Description Alias PCC hrr AMTR_s00001p00273020 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00001.586 0.9726129666670216 3 AMTR_s00059p00131310 Methyltransferase-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.108 0.9662105936997667 3 AMTR_s00029p00242750 Protein root UVB sensitive 5 OS=Arabidopsis thaliana RUS5, evm_27.TU.AmTr_v1.0_scaffold00029.424 0.9630698425999149 3 AMTR_s00041p00059380 evm_27.TU.AmTr_v1.0_scaffold00041.32 0.9608655259300153 11 AMTR_s00044p00224480 Auxin-responsive protein IAA32 OS=Arabidopsis thaliana IAA30, evm_27.TU.AmTr_v1.0_scaffold00044.245 0.9546931176913348 5 AMTR_s00009p00265260 evm_27.TU.AmTr_v1.0_scaffold00009.380 0.9536714809926009 6 AMTR_s00159p00058480 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana EMB2654, evm_27.TU.AmTr_v1.0_scaffold00159.22 0.9521254200179236 7 AMTR_s00111p00138070 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase EDD, EDD1, evm_27.TU.AmTr_v1.0_scaffold00111.118 0.9514060196127309 8 AMTR_s00022p00251260 RNA processing.organelle machineries.RNA modification.tRNA thiolation.MnmA pathway.tRNA thiouridylase evm_27.TU.AmTr_v1.0_scaffold00022.388 0.9506378895817168 9 AMTR_s00016p00242110 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.258 0.9500366691559079 10 AMTR_s00057p00162170 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.151 0.9489548282460548 11 AMTR_s00061p00213120 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00061.265 0.9462845068586399 28 AMTR_s00002p00268330 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00002.535 0.9461592195182028 18 AMTR_s00066p00131520 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.125 0.9452878744795401 15 AMTR_s00049p00181700 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC6 component SEC6, evm_27.TU.AmTr_v1.0_scaffold00049.176 0.944330144545579 15 AMTR_s00065p00048130 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.24 0.9426131095003188 31 AMTR_s00148p00070910 Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.45 0.942592328848754 25 AMTR_s00030p00222710 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.171 0.9424314882427718 18 AMTR_s00010p00241770 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.plastidial glucanotransferase DPE1, evm_27.TU.AmTr_v1.0_scaffold00010.311 0.9404439664429036 32 AMTR_s00045p00163960 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein TPR5, evm_27.TU.AmTr_v1.0_scaffold00045.188 0.9402102570431569 23 AMTR_s00037p00234680 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5-like chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00037.154 0.9388702536650252 21 AMTR_s00039p00144340 evm_27.TU.AmTr_v1.0_scaffold00039.98 0.9371233429549229 32 AMTR_s00001p00272880 Cell wall.hemicellulose.xyloglucan.modification and degradation.1,2-alpha-fucosidase FUC95A, evm_27.TU.AmTr_v1.0_scaffold00001.572 0.937002833762764 23 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9366959106055623 30 AMTR_s00047p00213160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00047.154 0.9364921719618671 32 AMTR_s00039p00125380 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1, evm_27.TU.AmTr_v1.0_scaffold00039.79 0.9363858740119737 44 AMTR_s00032p00034370 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE evm_27.TU.AmTr_v1.0_scaffold00032.15 0.9362304149774429 27 AMTR_s00149p00069080 DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00149.47 0.935589558533182 28 AMTR_s00021p00166450 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.120 0.9350552499771656 29 AMTR_s00023p00241180 evm_27.TU.AmTr_v1.0_scaffold00023.207 0.9349670440106772 30 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.9341568208009736 46 AMTR_s00002p00270610 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade J phosphatase evm_27.TU.AmTr_v1.0_scaffold00002.591 0.93301978107563 41 AMTR_s00085p00151790 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component ATB BETA, evm_27.TU.AmTr_v1.0_scaffold00085.94 0.9328338969852935 33 AMTR_s00169p00027470 Cell cycle.interphase.DNA replication.telomere replication.telomere integrity maintenance complex.CTC1 component CTC1, ATCTC1, evm_27.TU.AmTr_v1.0_scaffold00169.14 0.9315246856937558 39 AMTR_s00027p00231240 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) evm_27.TU.AmTr_v1.0_scaffold00027.113 0.9313391977946124 35 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.9306318275969481 79 AMTR_s00010p00258180 EMB2756, evm_27.TU.AmTr_v1.0_scaffold00010.410 0.9306053264074818 37 AMTR_s00062p00145630 CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00062.132 0.9303326572106824 38 AMTR_s00085p00149180 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.DNA helicase (RCK/MER3) RCK, MER3, evm_27.TU.AmTr_v1.0_scaffold00085.93 0.9302119217540267 61 AMTR_s00019p00204140 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS52/POK component POK, TTD8, ATVPS52, evm_27.TU.AmTr_v1.0_scaffold00019.240 0.9301521830021984 40 AMTR_s00002p00268800 evm_27.TU.AmTr_v1.0_scaffold00002.541 0.9301394724572891 41 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9300670045102256 72 AMTR_s00080p00046380 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.12 0.9294713742498277 43 AMTR_s00055p00187070 Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana EDM2, evm_27.TU.AmTr_v1.0_scaffold00055.116 0.929375738980461 50 AMTR_s00106p00043170 Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.22 0.9291717913574173 45 AMTR_s00032p00018130 Obg-like ATPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.3 0.9291674647639492 46 AMTR_s00044p00037180 Cell cycle.organelle machineries.organelle fission.plastid division.ARC3 FtsZ assembly factor ARC3, evm_27.TU.AmTr_v1.0_scaffold00044.12 0.9289148839674536 47 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3, evm_27.TU.AmTr_v1.0_scaffold00026.2 0.9286657636012393 72 AMTR_s00045p00062170 RNA processing.RNA modification.rRNA/tRNA methylation.TRM13 tRNA adenosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00045.45 0.9286223628947669 49 AMTR_s00025p00142780 Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.155 0.9283365508218856 50 AMTR_s00022p00127120 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana CRR22, evm_27.TU.AmTr_v1.0_scaffold00022.118 0.9281139830770353 51 AMTR_s00046p00080660 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase BRIZ2, evm_27.TU.AmTr_v1.0_scaffold00046.35 0.9280195896524667 52 AMTR_s00038p00208310 Protein WHATS THIS FACTOR 1 OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00038.162 0.9273420660092937 53 AMTR_s00004p00118340 evm_27.TU.AmTr_v1.0_scaffold00004.101 0.9269696945240135 54 AMTR_s00101p00067890 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00101.41 0.9264526678912383 55 AMTR_s00026p00146790 Aberrant root formation protein 4 OS=Arabidopsis thaliana ALF4, evm_27.TU.AmTr_v1.0_scaffold00026.71 0.9257757177939507 56 AMTR_s00032p00130220 evm_27.TU.AmTr_v1.0_scaffold00032.89 0.9254193681896106 57 AMTR_s00082p00122660 evm_27.TU.AmTr_v1.0_scaffold00082.26 0.9252682770156009 58 AMTR_s00078p00067180 Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana EMB2261, evm_27.TU.AmTr_v1.0_scaffold00078.40 0.9249188097880429 59 AMTR_s00023p00239630 evm_27.TU.AmTr_v1.0_scaffold00023.202 0.9234973852368477 60 AMTR_s00138p00029150 evm_27.TU.AmTr_v1.0_scaffold00138.10 0.9234839151609041 69 AMTR_s00165p00033420 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana TTL1, evm_27.TU.AmTr_v1.0_scaffold00165.18 0.9231104687369817 62 AMTR_s00025p00217750 Chloroplast envelope membrane protein OS=Chlorokybus atmophyticus evm_27.TU.AmTr_v1.0_scaffold00025.298 0.9226130154685618 63 AMTR_s00076p00181180 Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.69 0.9226034953811518 64 AMTR_s00055p00188830 BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.121 0.9224444841486827 65 AMTR_s00053p00126930 evm_27.TU.AmTr_v1.0_scaffold00053.75 0.9217735808360011 66 AMTR_s00197p00022610 Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00197.5 0.9217603198238393 67 AMTR_s00066p00157030 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.162 0.9213000975017496 68 AMTR_s00003p00258530 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component CLUB, AtTRS130, evm_27.TU.AmTr_v1.0_scaffold00003.323 0.9211057736961159 69 AMTR_s00059p00100910 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00059.74 0.9209140827987977 70 AMTR_s00092p00069380 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP5/TAC12 component PTAC12, HMR, evm_27.TU.AmTr_v1.0_scaffold00092.35 0.9205372859223871 71 AMTR_s00203p00011990 evm_27.TU.AmTr_v1.0_scaffold00203.2 0.9205331041656684 72 AMTR_s00016p00112930 Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.74 0.9203700668417829 74 AMTR_s00078p00138290 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter ATATH6, ATH6, evm_27.TU.AmTr_v1.0_scaffold00078.113 0.9200025218119582 75 AMTR_s00067p00129330 Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana emb1974, evm_27.TU.AmTr_v1.0_scaffold00067.111 0.9195488977357225 77 AMTR_s00003p00270420 0.9193260185312357 78 AMTR_s00061p00187730 evm_27.TU.AmTr_v1.0_scaffold00061.214 0.9191066414889847 79 AMTR_s00111p00074750 Lipid metabolism.sphingolipid metabolism.ceramide kinase evm_27.TU.AmTr_v1.0_scaffold00111.47 0.9179794145753852 81 AMTR_s00033p00039610 Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.16 0.9177900778356013 93 AMTR_s00066p00191280 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO, evm_27.TU.AmTr_v1.0_scaffold00066.244 0.9177746206741763 85 AMTR_s00063p00176210 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter evm_27.TU.AmTr_v1.0_scaffold00063.57 0.9168250055100603 84 AMTR_s00093p00080210 Tubulin gamma-1 chain OS=Arabidopsis thaliana TUBG1, evm_27.TU.AmTr_v1.0_scaffold00093.21 0.9167921047823973 85 AMTR_s00049p00185080 evm_27.TU.AmTr_v1.0_scaffold00049.184 0.9161126265005943 86 AMTR_s00019p00231050 Uncharacterized protein At2g39910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.315 0.9155256476091737 87 AMTR_s00045p00091940 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.85 0.9153894339725226 88 AMTR_s00009p00266540 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.396 0.9150908454006131 89 AMTR_s00111p00067270 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00111.37 0.9150639392614976 90 AMTR_s00049p00176850 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.RGS1 G-protein immune signalling regulator RGS1, ATRGS1, evm_27.TU.AmTr_v1.0_scaffold00049.169 0.9148013788550454 91 AMTR_s00047p00206550 evm_27.TU.AmTr_v1.0_scaffold00047.141 0.9144287020465461 92 AMTR_s00024p00249000 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecG-type DNA translocase evm_27.TU.AmTr_v1.0_scaffold00024.324 0.9141149952076677 93 AMTR_s00038p00133080 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00038.78 0.9135219631952789 95 AMTR_s00016p00231800 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XV kinase CLI1, RPK2, TOAD2, evm_27.TU.AmTr_v1.0_scaffold00016.228 0.9134340415205903 96 AMTR_s00029p00178860 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-48K snRNP component evm_27.TU.AmTr_v1.0_scaffold00029.238 0.913390344883883 97 AMTR_s00061p00209430 CIP4, evm_27.TU.AmTr_v1.0_scaffold00061.259 0.9131254808947682 98 AMTR_s00009p00261490 evm_27.TU.AmTr_v1.0_scaffold00009.333 0.9130549908476747 100