Sequence Description Alias PCC hrr AMTR_s00122p00077720 Photosynthesis.photorespiration.glycerate kinase evm_27.TU.AmTr_v1.0_scaffold00122.28 0.9472238920825276 1 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.9321450563487523 5 AMTR_s00159p00058480 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana EMB2654, evm_27.TU.AmTr_v1.0_scaffold00159.22 0.9293306437795744 19 AMTR_s00002p00254720 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT10, GMN10, MRS2-11, ATMGT10, evm_27.TU.AmTr_v1.0_scaffold00002.387 0.921233732909956 7 AMTR_s00117p00114400 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana AAE15, evm_27.TU.AmTr_v1.0_scaffold00117.48 0.9165912696855375 13 AMTR_s00099p00089660 evm_27.TU.AmTr_v1.0_scaffold00099.67 0.9151459073376368 14 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.25 0.9141611426548131 32 AMTR_s00016p00242110 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.258 0.9097610763336657 22 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.9095648986333819 9 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.9079024374186511 33 AMTR_s00065p00022170 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) PDE319, SCA3, evm_27.TU.AmTr_v1.0_scaffold00065.7 0.9077271651954749 20 AMTR_s00019p00208640 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.251 0.9076507201493489 22 AMTR_s00112p00137130 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (SGB/GlcT-type) evm_27.TU.AmTr_v1.0_scaffold00112.35 0.9070349743029922 13 AMTR_s00069p00176780 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP704A2, evm_27.TU.AmTr_v1.0_scaffold00069.157 0.9065538220143521 17 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3, evm_27.TU.AmTr_v1.0_scaffold00044.141 0.9057632340159887 43 AMTR_s00045p00149950 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.161 0.9054811829601666 19 AMTR_s00058p00193720 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase LSF1, evm_27.TU.AmTr_v1.0_scaffold00058.193 0.9035920842358662 21 AMTR_s00078p00073300 evm_27.TU.AmTr_v1.0_scaffold00078.44 0.9030322350701421 18 AMTR_s00040p00143220 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) evm_27.TU.AmTr_v1.0_scaffold00040.110 0.9024536644309602 19 AMTR_s00061p00120110 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase ADG1, APS1, evm_27.TU.AmTr_v1.0_scaffold00061.96 0.9003392960978983 32 AMTR_s00068p00029180 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1, evm_27.TU.AmTr_v1.0_scaffold00068.6 0.9003135656656746 79 AMTR_s00048p00155800 Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana RSH3, AT-RSH3, ATRSH3, evm_27.TU.AmTr_v1.0_scaffold00048.111 0.8977900573105774 22 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD1, evm_27.TU.AmTr_v1.0_scaffold00047.38 0.8942622875468973 60 AMTR_s00036p00115830 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor AT-HSFA6B, HSFA6B, evm_27.TU.AmTr_v1.0_scaffold00036.48 0.8934750410295492 24 AMTR_s00078p00035540 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6, evm_27.TU.AmTr_v1.0_scaffold00078.14 0.891728570578576 25 AMTR_s00071p00074520 PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.45 0.8886865411653333 29 AMTR_s00029p00225980 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter ANTR2, PHT4;4, evm_27.TU.AmTr_v1.0_scaffold00029.352 0.8878922894191186 50 AMTR_s00167p00056240 Lipid metabolism.lipid degradation.triacylglycerol lipase activities.diacyl-/triacylglycerol lipase activities.LIP-type lipase ATLIP1, LIP1, evm_27.TU.AmTr_v1.0_scaffold00167.23 0.8861528234917821 29 AMTR_s00106p00043170 Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.22 0.8825553074984674 60 AMTR_s00016p00187060 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase ATSKL1, SKL1, evm_27.TU.AmTr_v1.0_scaffold00016.149 0.8821450835267777 40 AMTR_s00110p00094310 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00110.55 0.8805304165695492 98 AMTR_s00072p00151180 Phosphoglycerate kinase 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.87 0.8799019695433478 40 AMTR_s00085p00105120 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.GWD glucan, water dikinase SEX1, SOP1, GWD, SOP, GWD1, evm_27.TU.AmTr_v1.0_scaffold00085.65 0.8790792582039536 66 AMTR_s00001p00272280 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG1 kinase component evm_27.TU.AmTr_v1.0_scaffold00001.512 0.8786616098318852 40 AMTR_s00017p00253090 Protein modification.acetylation.sirtuin-type lysine deacetylase SRT2, AtSRT2, evm_27.TU.AmTr_v1.0_scaffold00017.263 0.876192249721395 96 AMTR_s00065p00179810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein CLPB4, CLPB-M, HSP98.7, evm_27.TU.AmTr_v1.0_scaffold00065.151 0.875696455919591 41 AMTR_s00109p00097700 Malonate--CoA ligase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.85 0.873767889921901 50 AMTR_s00077p00134480 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8, evm_27.TU.AmTr_v1.0_scaffold00077.129 0.8735986050304987 99 AMTR_s00031p00115090 evm_27.TU.AmTr_v1.0_scaffold00031.51 0.8719376812566686 49 AMTR_s00029p00206560 Uncharacterized protein At2g39920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.297 0.8714668850263788 60 AMTR_s00014p00133450 Bifunctional nuclease 1 OS=Arabidopsis thaliana BBD1, ATBBD1, evm_27.TU.AmTr_v1.0_scaffold00014.49 0.8692868684219087 51 AMTR_s00101p00049040 evm_27.TU.AmTr_v1.0_scaffold00101.20 0.8682807543374496 53 AMTR_s00101p00054450 evm_27.TU.AmTr_v1.0_scaffold00101.26 0.8679549063189351 54 AMTR_s00077p00122240 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00077.115 0.8675229940163615 55 AMTR_s00077p00168500 evm_27.TU.AmTr_v1.0_scaffold00077.183 0.8674844961575165 56 AMTR_s00007p00247090 evm_27.TU.AmTr_v1.0_scaffold00007.270 0.8673825428582893 57 AMTR_s00033p00159870 Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.105 0.8667352493680861 59 AMTR_s00092p00109950 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.68 0.8665026892317315 96 AMTR_s00010p00256310 evm_27.TU.AmTr_v1.0_scaffold00010.391 0.8656261043316773 62 AMTR_s00074p00190580 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone evm_27.TU.AmTr_v1.0_scaffold00074.113 0.8633899238255497 64 AMTR_s00046p00227230 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.167 0.8621632802038026 65 AMTR_s00066p00130420 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.123 0.8620469159767634 95 AMTR_s00006p00263990 evm_27.TU.AmTr_v1.0_scaffold00006.263 0.8615164316985393 67 AMTR_s00022p00127970 evm_27.TU.AmTr_v1.0_scaffold00022.120 0.8605083463107789 70 AMTR_s00007p00198370 evm_27.TU.AmTr_v1.0_scaffold00007.171 0.8595686308987354 73 AMTR_s00025p00127130 evm_27.TU.AmTr_v1.0_scaffold00025.119 0.8595202503959626 83 AMTR_s00023p00186390 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor RPT1, PHOT1, NPH1, JK224, evm_27.TU.AmTr_v1.0_scaffold00023.124 0.8579831331657344 96 AMTR_s00010p00223650 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.245 0.8575540017997355 79 AMTR_s00085p00110520 evm_27.TU.AmTr_v1.0_scaffold00085.68 0.8565021409836083 82 AMTR_s00019p00039970 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana PGR3, evm_27.TU.AmTr_v1.0_scaffold00019.19 0.8557757834687485 85 AMTR_s00074p00121610 Photosynthesis.photophosphorylation.chlororespiration.PTOX terminal oxidase IM1, IM, evm_27.TU.AmTr_v1.0_scaffold00074.38 0.8537075197532841 93 AMTR_s00144p00074180 evm_27.TU.AmTr_v1.0_scaffold00144.37 0.8532601822560917 94 AMTR_s00029p00107920 evm_27.TU.AmTr_v1.0_scaffold00029.111 0.8532454460153531 95