Sequence Description Alias PCC hrr AMTR_s00111p00141410 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component ATGCP4, GCP4, evm_27.TU.AmTr_v1.0_scaffold00111.121 0.9374654761681853 8 AMTR_s00003p00241010 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase PHS1, evm_27.TU.AmTr_v1.0_scaffold00003.257 0.9355688971777022 28 AMTR_s00010p00249970 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00010.349 0.9298843020711038 5 AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9295616275681482 78 AMTR_s00045p00173390 Protein degradation.peptidase families.serine-type peptidase activities.LON protease LON_ARA_ARA, LON1, evm_27.TU.AmTr_v1.0_scaffold00045.207 0.9293349712016354 10 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9292312335379742 13 AMTR_s00003p00233250 evm_27.TU.AmTr_v1.0_scaffold00003.233 0.9290544187193384 26 AMTR_s00019p00174630 evm_27.TU.AmTr_v1.0_scaffold00019.176 0.9276331851753311 8 AMTR_s00006p00265240 evm_27.TU.AmTr_v1.0_scaffold00006.274 0.9258730347537633 9 AMTR_s00032p00145910 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC5 component evm_27.TU.AmTr_v1.0_scaffold00032.111 0.9250517730537922 10 AMTR_s00087p00169870 Protein XRI1 OS=Arabidopsis thaliana XRI1, XRI, evm_27.TU.AmTr_v1.0_scaffold00087.53 0.9246082744962522 11 AMTR_s00003p00029910 DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MSH2-x mismatch repair heterodimers.MSH6 component MSH6-1, ATMSH6, MSH6, evm_27.TU.AmTr_v1.0_scaffold00003.14 0.9244980643480996 18 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component EMB1265, ATCPSF100, CPSF100, ESP5, evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9237064337791671 86 AMTR_s00074p00162130 Lipid metabolism.lipid A synthesis.LpxB lipid-A-disaccharide synthase evm_27.TU.AmTr_v1.0_scaffold00074.77 0.9221285313592362 16 AMTR_s00101p00142180 evm_27.TU.AmTr_v1.0_scaffold00101.118 0.920940225382223 87 AMTR_s00059p00171720 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00059.168 0.9209145610489251 62 AMTR_s00032p00046150 EMB1611, MEE22, evm_27.TU.AmTr_v1.0_scaffold00032.25 0.9207509975539322 35 AMTR_s00025p00140350 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00025.148 0.9204310243108833 37 AMTR_s00109p00150460 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.1-deoxy-d-xylulose 5-phosphate import.D-xylulose kinase XK-2, XK2, evm_27.TU.AmTr_v1.0_scaffold00109.167 0.9189186428416396 19 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana MAA3, evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9187079670534225 84 AMTR_s00101p00117720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma evm_27.TU.AmTr_v1.0_scaffold00101.91 0.9175893046593978 36 AMTR_s00040p00226100 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor RAD5, evm_27.TU.AmTr_v1.0_scaffold00040.267 0.9172549938283927 37 AMTR_s00032p00163130 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.136 0.9168519215616073 44 AMTR_s00045p00203910 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase PRMT4B, ATPRMT4B, evm_27.TU.AmTr_v1.0_scaffold00045.269 0.9166336844429714 45 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor HUA1, evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9158156019010469 36 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9154836334537811 33 AMTR_s00009p00262810 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00009.351 0.9152800212741954 28 AMTR_s00040p00223590 DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.260 0.9151387241060697 29 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9137126443598292 94 AMTR_s00123p00071440 O-fucosyltransferase 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00123.8 0.9131670988348592 57 AMTR_s00099p00129340 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor HVE, TIP120, CAND1, ATCAND1, ETA2, evm_27.TU.AmTr_v1.0_scaffold00099.115 0.9127134056436464 48 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.912347860863061 96 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9120319277824495 99 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.9114220762292319 36 AMTR_s00002p00262480 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.INDL component INDL, evm_27.TU.AmTr_v1.0_scaffold00002.461 0.9095359835442856 38 AMTR_s00006p00257410 evm_27.TU.AmTr_v1.0_scaffold00006.199 0.9086879562223842 39 AMTR_s00012p00263630 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UPP, PYRR, evm_27.TU.AmTr_v1.0_scaffold00012.347 0.9072755826558387 48 AMTR_s00106p00139270 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit TCP-1, ATTCP-1, evm_27.TU.AmTr_v1.0_scaffold00106.110 0.9062426740123345 85 AMTR_s00165p00069630 Protein DA1-related 2 OS=Arabidopsis thaliana DAR2, evm_27.TU.AmTr_v1.0_scaffold00165.47 0.9061262395386244 44 AMTR_s00025p00221910 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase ATPRMT5, PRMT5, SKB1, evm_27.TU.AmTr_v1.0_scaffold00025.311 0.9058148646024388 57 AMTR_s00072p00067600 Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana ATUBP14, TTN6, PER1, UBP14, evm_27.TU.AmTr_v1.0_scaffold00072.29 0.9049206553730559 90 AMTR_s00057p00122610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component SCC3, ATSCC3, evm_27.TU.AmTr_v1.0_scaffold00057.101 0.904768923629049 61 AMTR_s00065p00210150 evm_27.TU.AmTr_v1.0_scaffold00065.206 0.904686597140705 94 AMTR_s00033p00150780 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana ATX1, SDG27, evm_27.TU.AmTr_v1.0_scaffold00033.97 0.9045157188637035 69 AMTR_s00029p00201060 Solute transport.carrier-mediated transport.MC-type solute transporter ATPUMP1, UCP, UCP1, PUMP1, ATUCP1, evm_27.TU.AmTr_v1.0_scaffold00029.282 0.9042736794628277 52 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.9040119545993481 53 AMTR_s00049p00023780 evm_27.TU.AmTr_v1.0_scaffold00049.12 0.9029957969160587 58 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9026952939329665 100 AMTR_s00146p00075190 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00146.43 0.9022438216801832 60 AMTR_s00138p00108220 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component evm_27.TU.AmTr_v1.0_scaffold00138.52 0.9018161456681143 90 AMTR_s00052p00172760 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component VPS35B, evm_27.TU.AmTr_v1.0_scaffold00052.82 0.9011489528572011 64 AMTR_s00129p00085100 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component evm_27.TU.AmTr_v1.0_scaffold00129.62 0.9010448775110119 65 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9004567434665086 79 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP8, evm_27.TU.AmTr_v1.0_scaffold00004.183 0.9001601085670261 68 AMTR_s00085p00011540 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00085.1 0.8991012982354488 72 AMTR_s00001p00260080 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a (SPO11) SPO11-2, evm_27.TU.AmTr_v1.0_scaffold00001.369 0.8990175197889448 73 AMTR_s00029p00148220 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO5 transport karyopherin HST, HST1, evm_27.TU.AmTr_v1.0_scaffold00029.175 0.8988174638227941 74 AMTR_s00061p00214600 Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.269 0.8987372353113539 95 AMTR_s00004p00133120 Protein modification.phosphorylation.TSL/TOUSLED kinase TSL, evm_27.TU.AmTr_v1.0_scaffold00004.128 0.8981602835145418 78 AMTR_s00049p00219600 evm_27.TU.AmTr_v1.0_scaffold00049.255 0.8979108561677418 80 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.8972499956527857 91 AMTR_s00044p00049370 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor AGO1, evm_27.TU.AmTr_v1.0_scaffold00044.24 0.8967146921771629 85 AMTR_s00030p00236070 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00030.199 0.8963269790263475 86 AMTR_s00029p00059460 Cell cycle.organelle machineries.organelle fission.plastid division.PARC6 FtsZ assembly regulator CDP1, PARC6, ARC6H, ATCDP1, evm_27.TU.AmTr_v1.0_scaffold00029.54 0.8956865284468147 88 AMTR_s00001p00270540 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00001.464 0.8956850057773668 89 AMTR_s00125p00115160 evm_27.TU.AmTr_v1.0_scaffold00125.29 0.895293181361969 91 AMTR_s00036p00225190 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component evm_27.TU.AmTr_v1.0_scaffold00036.165 0.8950432837723461 92 AMTR_s00065p00134450 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ECA P2A-type calcium cation-transporting ATPase ECA3, ATECA3, evm_27.TU.AmTr_v1.0_scaffold00065.91 0.8948456695545288 94 AMTR_s00025p00035780 evm_27.TU.AmTr_v1.0_scaffold00025.13 0.8944553154433186 98 AMTR_s00146p00028980 evm_27.TU.AmTr_v1.0_scaffold00146.11 0.8941387508124957 99 AMTR_s00170p00030060 Protein modification.phosphorylation.TKL kinase superfamily.LRR-II kinase evm_27.TU.AmTr_v1.0_scaffold00170.10 0.894125229803086 100