Sequence Description Alias PCC hrr AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2, evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9569437717108678 2 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14, evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9530327049138636 3 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.9421330995757787 5 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2, evm_27.TU.AmTr_v1.0_scaffold00068.139 0.938569371662994 8 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9356877797028325 12 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2, evm_27.TU.AmTr_v1.0_scaffold00138.19 0.932622793493681 21 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.9319234781694014 7 AMTR_s00198p00028070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT, evm_27.TU.AmTr_v1.0_scaffold00198.5 0.9317123562086418 10 AMTR_s00061p00131900 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component VCS, evm_27.TU.AmTr_v1.0_scaffold00061.110 0.9263286679094722 15 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.9260663541343568 10 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9251001471406596 53 AMTR_s00040p00228310 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit alpha-ADR, evm_27.TU.AmTr_v1.0_scaffold00040.272 0.9235351058668088 12 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.9231923210512916 13 AMTR_s00061p00084390 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component evm_27.TU.AmTr_v1.0_scaffold00061.60 0.9209933376775895 14 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor AHK2, HK2, evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9192068589938491 36 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor ATHPCAT2, HAC1, ATHAC1, PCAT2, evm_27.TU.AmTr_v1.0_scaffold00079.26 0.9183299371021926 16 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9172292795968889 22 AMTR_s00154p00087040 evm_27.TU.AmTr_v1.0_scaffold00154.57 0.9162634108240115 18 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana UBP13, evm_27.TU.AmTr_v1.0_scaffold00004.137 0.915943512785897 58 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.9157314023774479 52 AMTR_s00029p00079800 RNA biosynthesis.transcriptional activation.HUA2 transcription factor HUA2, evm_27.TU.AmTr_v1.0_scaffold00029.74 0.9141678345959452 22 AMTR_s00142p00090900 emb2410, evm_27.TU.AmTr_v1.0_scaffold00142.59 0.9138868320973479 23 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9130548954260888 42 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.9125110313110502 60 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component CUM2, EIF4G, evm_27.TU.AmTr_v1.0_scaffold00002.103 0.911485523854419 26 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9112334944517796 57 AMTR_s00025p00024460 5-3 exoribonuclease 3 OS=Arabidopsis thaliana XRN3, AtXRN3, evm_27.TU.AmTr_v1.0_scaffold00025.5 0.9098351017300766 28 AMTR_s00022p00114710 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507, evm_27.TU.AmTr_v1.0_scaffold00022.105 0.909132790154733 29 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80, evm_27.TU.AmTr_v1.0_scaffold00053.139 0.9088930673428043 36 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA2, KEA2, evm_27.TU.AmTr_v1.0_scaffold00009.318 0.9080565531157018 48 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.9077772535340474 59 AMTR_s00006p00267510 Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana ATMBD9, MBD9, evm_27.TU.AmTr_v1.0_scaffold00006.303 0.9059875461007366 34 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2, evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9059748547436076 91 AMTR_s00182p00016710 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3, evm_27.TU.AmTr_v1.0_scaffold00182.5 0.9059411434408509 36 AMTR_s00029p00083380 evm_27.TU.AmTr_v1.0_scaffold00029.77 0.9043731227130897 37 AMTR_s00148p00090060 Helicase protein MOM1 OS=Arabidopsis thaliana MOM1, MOM, evm_27.TU.AmTr_v1.0_scaffold00148.61 0.904355088591329 39 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155, evm_27.TU.AmTr_v1.0_scaffold00060.71 0.9037445683591451 46 AMTR_s00007p00205840 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component RAPTOR1, ATRAPTOR1B, RAPTOR1B, evm_27.TU.AmTr_v1.0_scaffold00007.183 0.9017954480514242 41 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP7, evm_27.TU.AmTr_v1.0_scaffold00147.15 0.901743232949227 86 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component TOR, evm_27.TU.AmTr_v1.0_scaffold00060.9 0.901612190762453 65 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 NRPA1, evm_27.TU.AmTr_v1.0_scaffold00022.362 0.9011046342518421 50 AMTR_s00033p00211330 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1, evm_27.TU.AmTr_v1.0_scaffold00033.185 0.9006411499172609 46 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor SYD, CHR3, evm_27.TU.AmTr_v1.0_scaffold00090.83 0.8996306469502757 49 AMTR_s00071p00142490 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein UPF1, ATUPF1, LBA1, evm_27.TU.AmTr_v1.0_scaffold00071.128 0.8976603876353441 51 AMTR_s00078p00187540 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana EMB2745, evm_27.TU.AmTr_v1.0_scaffold00078.193 0.8975051475044561 52 AMTR_s00007p00168430 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8960515018594136 54 AMTR_s00268p00016240 Protein modification.phosphorylation.atypical kinase families.PIKK kinase evm_27.TU.AmTr_v1.0_scaffold00268.6 0.8953072394317221 55 AMTR_s00041p00031550 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor evm_27.TU.AmTr_v1.0_scaffold00041.15 0.8936947697194966 57 AMTR_s00078p00055040 RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase SDE1, RDR6, SGS2, evm_27.TU.AmTr_v1.0_scaffold00078.28 0.8926545925755053 58 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.8926284041338367 59 AMTR_s00078p00192630 evm_27.TU.AmTr_v1.0_scaffold00078.201 0.8910819375711584 69 AMTR_s00013p00056220 MEI1, evm_27.TU.AmTr_v1.0_scaffold00013.19 0.8909351949945208 64 AMTR_s00080p00131040 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase HERK1, evm_27.TU.AmTr_v1.0_scaffold00080.56 0.8899789837095082 65 AMTR_s00025p00184490 evm_27.TU.AmTr_v1.0_scaffold00025.223 0.8894463186825537 66 AMTR_s00020p00134590 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IPO8 import karyopherin SAD2, URM9, evm_27.TU.AmTr_v1.0_scaffold00020.48 0.8876724514846724 70 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.8868002367937963 82 AMTR_s00046p00223780 Protein degradation.peptidase families.metallopeptidase activities.M3 protease evm_27.TU.AmTr_v1.0_scaffold00046.160 0.8863800338783373 94 AMTR_s00002p00260810 DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.446 0.8853355796287364 79 AMTR_s00010p00207960 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.201 0.8852031002659426 96 AMTR_s00006p00248360 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG, evm_27.TU.AmTr_v1.0_scaffold00006.138 0.8849484463194993 84 AMTR_s00064p00131270 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group ATPI4K ALPHA, evm_27.TU.AmTr_v1.0_scaffold00064.50 0.8847062808396754 100 AMTR_s03799p00000720 evm_27.TU.AmTr_v1.0_scaffold03799.1 0.883529600065946 87 AMTR_s00059p00199900 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR, evm_27.TU.AmTr_v1.0_scaffold00059.222 0.882476163027206 89 AMTR_s00099p00149450 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.S-methylmethionine cycle.methionine S-methyltransferase MMT, evm_27.TU.AmTr_v1.0_scaffold00099.136 0.8822917517482896 90 AMTR_s00025p00230340 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.333 0.8816089649242135 93 AMTR_s00106p00090850 evm_27.TU.AmTr_v1.0_scaffold00106.59 0.8813275248610586 94 AMTR_s00008p00163370 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component evm_27.TU.AmTr_v1.0_scaffold00008.84 0.8810519548044018 97 AMTR_s00061p00109710 Proteasome activator subunit 4 OS=Arabidopsis thaliana PA200, evm_27.TU.AmTr_v1.0_scaffold00061.84 0.8808646241831349 98