Sequence Description Alias PCC hrr AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana CIP111, evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9351531818669778 14 AMTR_s00066p00184190 Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana PPR40, evm_27.TU.AmTr_v1.0_scaffold00066.231 0.9327865479869094 3 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9304376804607171 54 AMTR_s00066p00131520 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.125 0.9301458118381397 49 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase MGO1, TOP1, TOP1ALPHA, evm_27.TU.AmTr_v1.0_scaffold00059.214 0.9300155782894107 49 AMTR_s00099p00147110 EMB140, evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9290004306889263 21 AMTR_s00047p00213160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00047.154 0.9249779992006036 59 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9238741632961668 59 AMTR_s00002p00259560 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD, evm_27.TU.AmTr_v1.0_scaffold00002.437 0.9228643024746318 36 AMTR_s00025p00222570 evm_27.TU.AmTr_v1.0_scaffold00025.312 0.9224075955958384 11 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.920996155229343 44 AMTR_s00071p00119440 Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.93 0.9209879334091096 15 AMTR_s00036p00162680 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2, evm_27.TU.AmTr_v1.0_scaffold00036.78 0.9208502023099235 43 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9205890716870939 38 AMTR_s00004p00118340 evm_27.TU.AmTr_v1.0_scaffold00004.101 0.9204222242009166 63 AMTR_s00021p00235990 emb1703, evm_27.TU.AmTr_v1.0_scaffold00021.238 0.9174533638999733 22 AMTR_s00009p00241130 Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.214 0.9170375986025381 23 AMTR_s00024p00204830 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.187 0.9164152285555683 22 AMTR_s00026p00051870 RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator complex.DRB7 component DCL4, ATDCL4, evm_27.TU.AmTr_v1.0_scaffold00026.17 0.9163359207204556 47 AMTR_s00054p00159220 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-7 motor protein evm_27.TU.AmTr_v1.0_scaffold00054.57 0.9143975206895857 68 AMTR_s00003p00270420 0.9143584952409616 62 AMTR_s00119p00084460 Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.60 0.9132436726944899 29 AMTR_s00007p00157660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component evm_27.TU.AmTr_v1.0_scaffold00007.120 0.9119420757591238 30 AMTR_s00149p00066780 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade C phosphatase PLL1, evm_27.TU.AmTr_v1.0_scaffold00149.43 0.9116021689187175 30 AMTR_s00041p00230870 evm_27.TU.AmTr_v1.0_scaffold00041.273 0.9113791001347541 31 AMTR_s00061p00066220 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.41 0.9108211061120345 32 AMTR_s00101p00092140 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.69 0.9106512845987169 40 AMTR_s00044p00153760 Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.161 0.9103053063706353 43 AMTR_s00066p00157030 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.162 0.9101684259342399 51 AMTR_s00106p00113730 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM, evm_27.TU.AmTr_v1.0_scaffold00106.86 0.9101641695769962 36 AMTR_s00067p00206040 evm_27.TU.AmTr_v1.0_scaffold00067.228 0.9100772987236102 37 AMTR_s00024p00229430 0.9096519745666638 40 AMTR_s00013p00258230 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component RAD50, ATRAD50, evm_27.TU.AmTr_v1.0_scaffold00013.257 0.9096128410805729 72 AMTR_s00149p00057710 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU80 component ATKU80, KU80, evm_27.TU.AmTr_v1.0_scaffold00149.36 0.9090034154167886 43 AMTR_s00138p00085700 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin CASP, AtCASP, evm_27.TU.AmTr_v1.0_scaffold00138.45 0.9089287860205788 44 AMTR_s00203p00009790 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00203.1 0.9088460453197943 45 AMTR_s00030p00197350 RuvB-like protein 1 OS=Arabidopsis thaliana ATTIP49A, RIN1, evm_27.TU.AmTr_v1.0_scaffold00030.129 0.9086198794065006 46 AMTR_s00078p00067180 Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana EMB2261, evm_27.TU.AmTr_v1.0_scaffold00078.40 0.9081898490922449 95 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9063059134888553 90 AMTR_s00155p00053970 WPP domain-associated protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.28 0.905339420234612 76 AMTR_s00004p00160120 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.172 0.9036136332799853 68 AMTR_s00047p00208430 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1, evm_27.TU.AmTr_v1.0_scaffold00047.147 0.9034609295381846 53 AMTR_s00109p00063750 Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.49 0.903402026374939 54 AMTR_s00491p00000370 5-3 exoribonuclease 3 OS=Arabidopsis thaliana XRN3, AtXRN3, evm_27.TU.AmTr_v1.0_scaffold00491.1 0.9032735301956811 87 AMTR_s00026p00123370 evm_27.TU.AmTr_v1.0_scaffold00026.56 0.9029379229539667 56 AMTR_s00008p00203110 Protein argonaute 4A OS=Oryza sativa subsp. japonica AGO4, OCP11, evm_27.TU.AmTr_v1.0_scaffold00008.122 0.902083946419581 100 AMTR_s00295p00016480 evm_27.TU.AmTr_v1.0_scaffold00295.1 0.9018200732753379 61 AMTR_s00019p00245720 evm_27.TU.AmTr_v1.0_scaffold00019.382 0.9017928422007401 62 AMTR_s00010p00258180 EMB2756, evm_27.TU.AmTr_v1.0_scaffold00010.410 0.9003721317763588 94 AMTR_s00109p00094190 Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.80 0.8995561984140263 70 AMTR_s00023p00028640 SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.6 0.8991801096316987 71 AMTR_s00009p00214080 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.147 0.8990196629933515 72 AMTR_s00060p00144370 Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.86 0.8987120476394803 73 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.8983052199688978 75 AMTR_s00112p00086310 evm_27.TU.AmTr_v1.0_scaffold00112.21 0.8974835747400581 77 AMTR_s00077p00118560 Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.108 0.8965348966832144 82 AMTR_s00130p00090930 Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00130.42 0.8953013620121572 87 AMTR_s00037p00132790 evm_27.TU.AmTr_v1.0_scaffold00037.56 0.8933198157795934 92 AMTR_s00095p00125060 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component ATCSN2, CSN2, FUS12, COP12, evm_27.TU.AmTr_v1.0_scaffold00095.82 0.8919489781527054 98 AMTR_s00012p00226630 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein RDM12, IDN2, evm_27.TU.AmTr_v1.0_scaffold00012.177 0.8917471063972593 99 AMTR_s00119p00129000 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.NUFIP assembly factor evm_27.TU.AmTr_v1.0_scaffold00119.102 0.8915335159661321 100