Sequence Description Alias PCC hrr AMTR_s00039p00210570 Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana EMB2758 0.948158426980976 1 AMTR_s00025p00115250 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS11 component VPS11, ATVPS11, evm_27.TU.AmTr_v1.0_scaffold00025.104 0.9134927618203189 5 AMTR_s00017p00179100 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.92 0.9117446097012527 8 AMTR_s00002p00207490 evm_27.TU.AmTr_v1.0_scaffold00002.209 0.9116655035761351 15 AMTR_s00092p00062310 Coenzyme metabolism.NAD/NADP biosynthesis.NAD synthase evm_27.TU.AmTr_v1.0_scaffold00092.27 0.9066771206688974 66 AMTR_s00114p00090820 Solute transport.carrier-mediated transport.BART superfamily.BASS family.BASS small solute transporter evm_27.TU.AmTr_v1.0_scaffold00114.35 0.9032566221960374 10 AMTR_s00078p00125860 Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis evm_27.TU.AmTr_v1.0_scaffold00078.102 0.9004176765111158 27 AMTR_s00182p00010830 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00182.2 0.8994664392791033 12 AMTR_s00008p00099050 evm_27.TU.AmTr_v1.0_scaffold00008.35 0.8992495125012092 65 AMTR_s00003p00264590 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase LDL2, evm_27.TU.AmTr_v1.0_scaffold00003.362 0.8989456378723775 10 AMTR_s00016p00260190 evm_27.TU.AmTr_v1.0_scaffold00016.377 0.8979458723418943 11 AMTR_s00038p00236980 RNA biosynthesis.RNA polymerase I-dependent transcription.CCG/MEE12 transcription initiation factor MEE12, evm_27.TU.AmTr_v1.0_scaffold00038.242 0.8977657117165345 12 AMTR_s00030p00239430 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.208 0.8976470526853001 44 AMTR_s00020p00040210 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00020.11 0.8971830110199817 14 AMTR_s00033p00240190 Cell cycle.organelle machineries.DNA replication.single-stranded DNA (ssDNA) maintenance.OSB-type ssDNA-binding protein evm_27.TU.AmTr_v1.0_scaffold00033.256 0.8969425543049999 42 AMTR_s00122p00115170 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CRR21 RNA editing factor CRR21 0.8967599208739795 16 AMTR_s00001p00257310 Serine/threonine-protein kinase/endoribonuclease IRE1b OS=Arabidopsis thaliana ATIRE1-1, IRE1-1, evm_27.TU.AmTr_v1.0_scaffold00001.349 0.894729472891181 17 AMTR_s00056p00184430 evm_27.TU.AmTr_v1.0_scaffold00056.164 0.8916311459854772 18 AMTR_s00060p00127160 evm_27.TU.AmTr_v1.0_scaffold00060.67 0.8901487225187085 23 AMTR_s00021p00235220 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.236 0.8900257571735405 20 AMTR_s00159p00027030 evm_27.TU.AmTr_v1.0_scaffold00159.9 0.8899741553994994 21 AMTR_s00010p00250130 RNA processing.RNA modification.pseudouridylation.TruA-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00010.350 0.889585331041571 58 AMTR_s00058p00057440 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor EMB93, SOLDAT10, evm_27.TU.AmTr_v1.0_scaffold00058.26 0.8891408823030359 23 AMTR_s00031p00154540 F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.69 0.8880654831541296 24 AMTR_s00182p00050050 Protein degradation.peptidase families.serine-type peptidase activities.S28 serine carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00182.30 0.8875907403529104 25 AMTR_s00088p00069780 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00088.41 0.8834264825032473 85 AMTR_s00008p00028880 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00008.9 0.8833628267110855 45 AMTR_s00077p00190680 evm_27.TU.AmTr_v1.0_scaffold00077.227 0.8831470642486775 50 AMTR_s00146p00072100 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00146.42 0.8822092855545959 30 AMTR_s00110p00142760 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00110.117 0.882112909792755 31 AMTR_s00029p00163040 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.208 0.8815105983759794 32 AMTR_s00009p00201120 evm_27.TU.AmTr_v1.0_scaffold00009.128 0.8769760179077499 37 AMTR_s00010p00221510 RNA processing.RNA modification.rRNA/tRNA methylation.TRM9-TRM112 tRNA uridine-methyltransferase complex.TRM9 component evm_27.TU.AmTr_v1.0_scaffold00010.238 0.8765975632806451 66 AMTR_s00001p00176140 Protein translocation.endoplasmic reticulum.GET post-translational insertion system.GET4-GET5 scaffold subcomplex.GET4 GET3-recruitment component evm_27.TU.AmTr_v1.0_scaffold00001.168 0.8725044228326876 41 AMTR_s00025p00149340 evm_27.TU.AmTr_v1.0_scaffold00025.168 0.8710789072369789 43 AMTR_s00067p00028100 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim44 component ATTIM44-2, TIM44-2, evm_27.TU.AmTr_v1.0_scaffold00067.13 0.8694235835695764 52 AMTR_s00002p00179800 Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.155 0.8675758099538955 47 AMTR_s00017p00227510 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP27, evm_27.TU.AmTr_v1.0_scaffold00017.177 0.8665949632116956 66 AMTR_s00039p00206760 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component evm_27.TU.AmTr_v1.0_scaffold00039.174 0.8648386661619231 50 AMTR_s00030p00182140 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase ATHDA8, HDA8, HDA08, evm_27.TU.AmTr_v1.0_scaffold00030.113 0.8643176024082061 68 AMTR_s00061p00192780 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43, evm_27.TU.AmTr_v1.0_scaffold00061.222 0.8628749483752647 53 AMTR_s00003p00166290 Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.141 0.8624812843037604 55 AMTR_s00011p00227250 Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica AtPPa1, PPa1, evm_27.TU.AmTr_v1.0_scaffold00011.104 0.8622863177050151 63 AMTR_s00016p00221080 evm_27.TU.AmTr_v1.0_scaffold00016.202 0.8611899988573146 59 AMTR_s00036p00215850 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.PRC2 histone methylation complex.associated protein factors.PWO histone H3 methylation reader evm_27.TU.AmTr_v1.0_scaffold00036.143 0.861142066918473 60 AMTR_s00007p00203740 Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana EMB2453, ATPPR5, evm_27.TU.AmTr_v1.0_scaffold00007.179 0.8607745061879282 62 AMTR_s00029p00214000 Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.316 0.8603449353801728 63 AMTR_s00045p00178420 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS51/UNH component evm_27.TU.AmTr_v1.0_scaffold00045.216 0.8601622881638694 77 AMTR_s00033p00144300 F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.87 0.8593681837137966 67 AMTR_s00078p00045650 Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.20 0.8579966162078814 69 AMTR_s00038p00142520 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ATCDPMEK, CDPMEK, PDE277, ISPE, evm_27.TU.AmTr_v1.0_scaffold00038.87 0.8562124379074763 74 AMTR_s00018p00217640 RNA processing.RNA 5-end cap adding.mRNA capping enzyme evm_27.TU.AmTr_v1.0_scaffold00018.140 0.8560104489667881 86 AMTR_s00056p00136230 evm_27.TU.AmTr_v1.0_scaffold00056.108 0.8557425897916368 78 AMTR_s00088p00029040 evm_27.TU.AmTr_v1.0_scaffold00088.12 0.8535323106706255 81 AMTR_s00137p00039300 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.KNL2/Mis18 CENH3 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00137.13 0.8495998092464376 93 AMTR_s00015p00090420 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase FLD, evm_27.TU.AmTr_v1.0_scaffold00015.20 0.849251012930074 86 AMTR_s00066p00127210 Solute transport.porins.OEP37 outer membrane porin OEP37, ATOEP37, evm_27.TU.AmTr_v1.0_scaffold00066.120 0.8480849987589408 90 AMTR_s00111p00034520 evm_27.TU.AmTr_v1.0_scaffold00111.17 0.8479961610981628 91 AMTR_s00030p00089780 evm_27.TU.AmTr_v1.0_scaffold00030.37 0.8467874218138692 96 AMTR_s00041p00170140 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE2 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00041.124 0.8451051993738231 100