Sequence Description Alias PCC hrr AMTR_s00023p00031940 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase evm_27.TU.AmTr_v1.0_scaffold00023.9 0.944700123230508 1 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.9433169148778341 3 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.9234139129556245 4 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.9139656647802531 9 AMTR_s00052p00157970 evm_27.TU.AmTr_v1.0_scaffold00052.66 0.9122387462434833 25 AMTR_s00062p00065360 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin CHL, evm_27.TU.AmTr_v1.0_scaffold00062.38 0.9112900534281483 11 AMTR_s00038p00234220 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.234 0.9054263783974109 17 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.9010277263974643 31 AMTR_s00059p00166490 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component evm_27.TU.AmTr_v1.0_scaffold00059.157 0.8998788486129131 37 AMTR_s00046p00228230 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL13 component emb1473, evm_27.TU.AmTr_v1.0_scaffold00046.169 0.8996354638510556 70 AMTR_s00095p00128730 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component ACSF, CHL27, CRD1, evm_27.TU.AmTr_v1.0_scaffold00095.88 0.8987972999227289 51 AMTR_s00117p00058770 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase NPQ1, AVDE1, evm_27.TU.AmTr_v1.0_scaffold00117.15 0.8964252020516819 35 AMTR_s00003p00257280 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00003.320 0.8955163698403902 85 AMTR_s00006p00260480 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00006.222 0.8954860129725961 45 AMTR_s00013p00241300 evm_27.TU.AmTr_v1.0_scaffold00013.201 0.8951463885331811 25 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.8947578641352435 37 AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.8942179967966098 85 AMTR_s00069p00125390 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 crr1, evm_27.TU.AmTr_v1.0_scaffold00069.85 0.893198878788014 29 AMTR_s00045p00205250 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2, evm_27.TU.AmTr_v1.0_scaffold00045.272 0.8921395534712196 79 AMTR_s00048p00192820 ENH1, evm_27.TU.AmTr_v1.0_scaffold00048.152 0.8892937574734961 20 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.8892443359522522 31 AMTR_s00059p00121300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NOL component NOL, evm_27.TU.AmTr_v1.0_scaffold00059.95 0.8876803614702996 39 AMTR_s00010p00265920 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB4/NDF6 component NDF6, evm_27.TU.AmTr_v1.0_scaffold00010.515 0.8857432545893968 50 AMTR_s00002p00256470 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.408 0.88572300583258 75 AMTR_s00040p00174940 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.165 0.8855766463155766 85 AMTR_s00133p00054340 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.19 0.8853647832666035 31 AMTR_s00109p00113060 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.tocopherol cyclase (VTE1/TC) ATSDX1, VTE1, evm_27.TU.AmTr_v1.0_scaffold00109.111 0.8851973307700398 78 AMTR_s00055p00165940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761, evm_27.TU.AmTr_v1.0_scaffold00055.86 0.8843273859189156 60 AMTR_s00006p00252810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88, evm_27.TU.AmTr_v1.0_scaffold00006.165 0.8832430168152633 97 AMTR_s00099p00159350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) evm_27.TU.AmTr_v1.0_scaffold00099.158 0.8821241549311977 64 AMTR_s00029p00122880 Disease resistance protein RPS5 OS=Arabidopsis thaliana RPS5, evm_27.TU.AmTr_v1.0_scaffold00029.137 0.8802737040140242 88 AMTR_s00176p00057350 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase PAA1, HMA6, evm_27.TU.AmTr_v1.0_scaffold00176.30 0.87806656344976 45 AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL, evm_27.TU.AmTr_v1.0_scaffold00015.112 0.8775431978498559 73 AMTR_s00024p00220830 evm_27.TU.AmTr_v1.0_scaffold00024.217 0.8762904387367273 45 AMTR_s00066p00184560 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor ATPRFB, HCF109, evm_27.TU.AmTr_v1.0_scaffold00066.232 0.8759988214854862 68 AMTR_s00025p00042290 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL1, ADG2, evm_27.TU.AmTr_v1.0_scaffold00025.21 0.8759848297910973 85 AMTR_s00013p00233820 evm_27.TU.AmTr_v1.0_scaffold00013.185 0.8746304727838173 62 AMTR_s00006p00260630 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA, evm_27.TU.AmTr_v1.0_scaffold00006.223 0.8735421143340862 50 AMTR_s00061p00142700 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00061.123 0.8735284099759519 65 AMTR_s00061p00050140 evm_27.TU.AmTr_v1.0_scaffold00061.26 0.8710519065158483 76 AMTR_s00003p00270950 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR9 evm_27.TU.AmTr_v1.0_scaffold00003.446 0.8692839991016034 84 AMTR_s00010p00141760 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.dehydroascorbate reductase (DHAR) DHAR3, evm_27.TU.AmTr_v1.0_scaffold00010.104 0.8690486297045062 78 AMTR_s00147p00104660 evm_27.TU.AmTr_v1.0_scaffold00147.61 0.8690341851826955 62 AMTR_s00070p00046580 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00070.20 0.860275705025951 61 AMTR_s00069p00149060 evm_27.TU.AmTr_v1.0_scaffold00069.116 0.8553873575077087 72 AMTR_s00022p00112770 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component evm_27.TU.AmTr_v1.0_scaffold00022.100 0.855279680246691 74 AMTR_s00145p00071320 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein PPL1, evm_27.TU.AmTr_v1.0_scaffold00145.26 0.8534623617965535 77 AMTR_s00209p00028300 evm_27.TU.AmTr_v1.0_scaffold00209.8 0.8502903547668528 81 AMTR_s00009p00268600 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR POR C, PORC, evm_27.TU.AmTr_v1.0_scaffold00009.428 0.8498967887306528 82 AMTR_s00216p00022320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphtoate-phytyltransferase ABC4, evm_27.TU.AmTr_v1.0_scaffold00216.3 0.8496973227133757 93 AMTR_s00182p00029890 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA, evm_27.TU.AmTr_v1.0_scaffold00182.12 0.8494278638211376 85 AMTR_s00088p00137910 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.106 0.8486254827071845 89 AMTR_s00025p00231300 evm_27.TU.AmTr_v1.0_scaffold00025.336 0.8479485031974638 91 AMTR_s00071p00185160 evm_27.TU.AmTr_v1.0_scaffold00071.193 0.8472441653375582 92