Sequence Description Alias PCC hrr AMTR_s00004p00169140 Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana MBD11, ATMBD11, evm_27.TU.AmTr_v1.0_scaffold00004.189 0.8970971024517884 18 AMTR_s00013p00244720 RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold00013.205 0.8943472889403998 4 AMTR_s00067p00185510 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.197 0.8913039564187422 3 AMTR_s00029p00248960 evm_27.TU.AmTr_v1.0_scaffold00029.452 0.8858449979473632 5 AMTR_s00031p00165100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.70 0.885165158421511 40 AMTR_s00010p00225560 evm_27.TU.AmTr_v1.0_scaffold00010.252 0.8777448072537587 43 AMTR_s00032p00149770 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP59, ATCYP59, evm_27.TU.AmTr_v1.0_scaffold00032.116 0.8754513178702326 32 AMTR_s00040p00217700 evm_27.TU.AmTr_v1.0_scaffold00040.234 0.8725035022177858 8 AMTR_s00066p00038130 evm_27.TU.AmTr_v1.0_scaffold00066.14 0.8717127612921438 38 AMTR_s00099p00155770 Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.150 0.867619198637066 57 AMTR_s00092p00135160 SART-1 family protein DOT2 OS=Arabidopsis thaliana MDF, DOT2, evm_27.TU.AmTr_v1.0_scaffold00092.101 0.8673041068455672 11 AMTR_s00002p00251130 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.KTF1/SPT5L auxilary silencing factor SPT5L, KTF1, evm_27.TU.AmTr_v1.0_scaffold00002.356 0.865850844296237 37 AMTR_s00160p00078150 evm_27.TU.AmTr_v1.0_scaffold00160.29 0.8647088172138295 13 AMTR_s00078p00114350 Cold shock domain-containing protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.87 0.8642861425710622 72 AMTR_s00001p00270600 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00001.466 0.8633880018736662 15 AMTR_s00154p00024620 RNA processing.organelle machineries.RNA editing.ORRM-type RNA editing factor GR-RBP3, evm_27.TU.AmTr_v1.0_scaffold00154.7 0.8624741004806414 60 AMTR_s00057p00199190 Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana 0.8604875298040535 48 AMTR_s00169p00047130 evm_27.TU.AmTr_v1.0_scaffold00169.29 0.8569214280883485 47 AMTR_s00016p00253700 RNA processing.RNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) RNA pseudouridylation complex.Nap57/CBF5 pseudouridine synthase component CBF5, AtCBF5, NAP57, AtNAP57, evm_27.TU.AmTr_v1.0_scaffold00016.317 0.8558523564570892 49 AMTR_s00003p00181560 Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.158 0.8555926546471455 22 AMTR_s00018p00256290 evm_27.TU.AmTr_v1.0_scaffold00018.173 0.853939559315845 46 AMTR_s00047p00118220 evm_27.TU.AmTr_v1.0_scaffold00047.47 0.8507837210163657 22 AMTR_s00029p00190880 evm_27.TU.AmTr_v1.0_scaffold00029.258 0.8493135702931479 96 AMTR_s00011p00195950 Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.62 0.8479721140014296 35 AMTR_s00031p00137300 evm_27.TU.AmTr_v1.0_scaffold00031.58 0.8462232390430523 25 AMTR_s00015p00162660 evm_27.TU.AmTr_v1.0_scaffold00015.32 0.846162847881839 93 AMTR_s00030p00132070 Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana ATRZ-1A, evm_27.TU.AmTr_v1.0_scaffold00030.79 0.8450866613586224 87 AMTR_s00096p00079870 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana ATDRH1, DRH1, evm_27.TU.AmTr_v1.0_scaffold00096.33 0.8433463744981562 29 AMTR_s00167p00041230 evm_27.TU.AmTr_v1.0_scaffold00167.16 0.8430104008656497 70 AMTR_s00025p00023010 5-3 exoribonuclease 3 OS=Arabidopsis thaliana XRN3, AtXRN3, evm_27.TU.AmTr_v1.0_scaffold00025.4 0.8422336771888781 54 AMTR_s00023p00204740 evm_27.TU.AmTr_v1.0_scaffold00023.146 0.8419952824963555 32 AMTR_s00001p00152770 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS, evm_27.TU.AmTr_v1.0_scaffold00001.137 0.8411457013803154 86 AMTR_s00059p00067090 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component U1-70K, U1SNRNP, evm_27.TU.AmTr_v1.0_scaffold00059.43 0.8397719561691157 64 AMTR_s00109p00118420 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG1/NSN1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00109.117 0.8383102719874118 91 AMTR_s00078p00197410 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycoproteins.LRR-domain extensin evm_27.TU.AmTr_v1.0_scaffold00078.208 0.8363251599775148 37 AMTR_s00136p00027550 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00136.6 0.8362711115111087 39 AMTR_s00153p00073330 Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana TAF15b, evm_27.TU.AmTr_v1.0_scaffold00153.37 0.8354845593724025 52 AMTR_s00007p00220760 evm_27.TU.AmTr_v1.0_scaffold00007.211 0.8338044721099842 42 AMTR_s00018p00249030 evm_27.TU.AmTr_v1.0_scaffold00018.158 0.832089186117803 59 AMTR_s00028p00219740 evm_27.TU.AmTr_v1.0_scaffold00028.105 0.8283060310125022 46 AMTR_s00068p00090790 Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.alpha-Tubulin component TUA3, evm_27.TU.AmTr_v1.0_scaffold00068.45 0.8235382065916952 50 AMTR_s00010p00265940 evm_27.TU.AmTr_v1.0_scaffold00010.516 0.823411194699694 51 AMTR_s00080p00105360 evm_27.TU.AmTr_v1.0_scaffold00080.39 0.8214970005217823 52 AMTR_s00079p00148810 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-1 kinase CRK25, evm_27.TU.AmTr_v1.0_scaffold00079.65 0.8194059606584521 55 AMTR_s00099p00156210 evm_27.TU.AmTr_v1.0_scaffold00099.152 0.8173617338227964 57 AMTR_s00021p00102690 evm_27.TU.AmTr_v1.0_scaffold00021.49 0.8165808088390717 59 AMTR_s00155p00094050 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00155.65 0.8157136235866775 77 AMTR_s00130p00083610 evm_27.TU.AmTr_v1.0_scaffold00130.39 0.8146920811031312 61 AMTR_s00059p00078950 Acidic leucine-rich nuclear phosphoprotein 32-related protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.55 0.813561340608311 78 AMTR_s00062p00173640 Protein DETOXIFICATION 40 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.166 0.8131597229245181 63 AMTR_s00003p00259820 evm_27.TU.AmTr_v1.0_scaffold00003.335 0.8123903597810639 81 AMTR_s00039p00023470 evm_27.TU.AmTr_v1.0_scaffold00039.3 0.8092082946933529 70 AMTR_s00073p00163500 evm_27.TU.AmTr_v1.0_scaffold00073.47 0.8061865460978735 73 AMTR_s00025p00239420 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor CCH1, GUN5, CHLH, CCH, ABAR, evm_27.TU.AmTr_v1.0_scaffold00025.362 0.8060736862695305 74 AMTR_s00014p00104370 evm_27.TU.AmTr_v1.0_scaffold00014.36 0.8044196366678878 77 AMTR_s00001p00148480 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AUL clathrin uncoating protein evm_27.TU.AmTr_v1.0_scaffold00001.131 0.802094634595085 82 AMTR_s00042p00092650 evm_27.TU.AmTr_v1.0_scaffold00042.21 0.8008084153908472 83 AMTR_s00068p00031610 Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.7 0.7983001434580995 86 AMTR_s00008p00153950 RNA processing.organelle machineries.RNA editing.mitochondrial RNA editing.MEF10 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00008.76 0.7975744505037756 88 AMTR_s00151p00093280 evm_27.TU.AmTr_v1.0_scaffold00151.29 0.7970457781038853 89 AMTR_s00009p00247110 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana SKIP4, evm_27.TU.AmTr_v1.0_scaffold00009.242 0.7955785777039704 90 AMTR_s00221p00026280 evm_27.TU.AmTr_v1.0_scaffold00221.7 0.7937487872425381 93 AMTR_s00138p00031220 RNA biosynthesis.transcriptional activation.PHD finger transcription factor MMD1, evm_27.TU.AmTr_v1.0_scaffold00138.11 0.7936054187424189 94 AMTR_s00151p00093180 evm_27.TU.AmTr_v1.0_scaffold00151.28 0.7933371483365604 95 AMTR_s00033p00212490 RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor evm_27.TU.AmTr_v1.0_scaffold00033.186 0.7933261948270341 96