Sequence Description Alias PCC hrr AMTR_s00048p00066880 Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana NHL8, evm_27.TU.AmTr_v1.0_scaffold00048.27 0.9374383556880211 2 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9320120665550685 11 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor SPL1, evm_27.TU.AmTr_v1.0_scaffold00045.66 0.92441025909977 31 AMTR_s00058p00182510 CASP-like protein 4A3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.173 0.9196394180795 4 AMTR_s00022p00020890 evm_27.TU.AmTr_v1.0_scaffold00022.6 0.9193604801848497 26 AMTR_s00033p00059780 Protein modification.lipidation.Cys-linked S-acylation.protein S-acyltransferase TIP1, evm_27.TU.AmTr_v1.0_scaffold00033.26 0.9190866918518151 11 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9188356488667111 32 AMTR_s00037p00128200 evm_27.TU.AmTr_v1.0_scaffold00037.54 0.9177218855917475 8 AMTR_s00019p00152360 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) ATCNGC17, CNGC17, evm_27.TU.AmTr_v1.0_scaffold00019.141 0.9176469248358146 9 AMTR_s00058p00164840 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS15 regulatory component evm_27.TU.AmTr_v1.0_scaffold00058.147 0.9165481698539494 10 AMTR_s00032p00061960 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKC kinase CDKC;1, evm_27.TU.AmTr_v1.0_scaffold00032.39 0.9161825368046245 11 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.9139632371367093 36 AMTR_s00137p00010410 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade I phosphatase evm_27.TU.AmTr_v1.0_scaffold00137.1 0.9134991839999782 13 AMTR_s00036p00205320 Protein degradation.peptidase families.metallopeptidase activities.M16 families.PQQL-like peptidase evm_27.TU.AmTr_v1.0_scaffold00036.122 0.913049953005829 22 AMTR_s00055p00165140 Protein modification.N-linked glycosylation.complex N-glycan maturation.beta-1,2-xylosyltransferase XYLT, ATXYLT, evm_27.TU.AmTr_v1.0_scaffold00055.85 0.9115868799234079 15 AMTR_s00100p00112150 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00100.35 0.9110252700715323 32 AMTR_s00036p00227770 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00036.169 0.9101203882205884 18 AMTR_s00003p00269470 evm_27.TU.AmTr_v1.0_scaffold00003.408 0.9090423345259067 20 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component ATRAD21.3, SYN4, evm_27.TU.AmTr_v1.0_scaffold00066.206 0.9075016161890439 35 AMTR_s00085p00119470 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00085.75 0.9070729175134568 21 AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.9063750690229724 51 AMTR_s00059p00138250 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG7 ATG8/12-activating E1 protein ATAPG7, APG7, ATG7, ATATG7, evm_27.TU.AmTr_v1.0_scaffold00059.120 0.9050346633120393 75 AMTR_s00023p00208940 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY4, evm_27.TU.AmTr_v1.0_scaffold00023.152 0.9045748831727757 33 AMTR_s00135p00021060 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP16, evm_27.TU.AmTr_v1.0_scaffold00135.4 0.9033907189129547 25 AMTR_s00071p00188270 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component ATUPF3, UPF3, evm_27.TU.AmTr_v1.0_scaffold00071.198 0.9033504189323229 26 AMTR_s00104p00134460 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein evm_27.TU.AmTr_v1.0_scaffold00104.64 0.9029927751876715 28 AMTR_s00017p00141460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00017.65 0.9020434140854807 73 AMTR_s00003p00081550 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00003.47 0.9017486044591817 30 AMTR_s00025p00181800 Pumilio homolog 5 OS=Arabidopsis thaliana PUM5, APUM5, evm_27.TU.AmTr_v1.0_scaffold00025.219 0.9016930284132902 31 AMTR_s00004p00023800 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase ATEDR1, EDR1, evm_27.TU.AmTr_v1.0_scaffold00004.8 0.9001284595322784 33 AMTR_s00154p00086540 Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00154.56 0.8994080536728422 34 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8993771113950171 35 AMTR_s00067p00089960 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.66 0.8991742518784919 38 AMTR_s00049p00063500 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component ATB' GAMMA, evm_27.TU.AmTr_v1.0_scaffold00049.40 0.8990695577801001 37 AMTR_s00104p00047630 Disease resistance protein RPS2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.12 0.8983855077196298 72 AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana APUM2, PUM2, evm_27.TU.AmTr_v1.0_scaffold00012.251 0.8981396970174641 39 AMTR_s00148p00018960 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP96 scaffold nucleoporin NUP96, PRE, SAR3, MOS3, evm_27.TU.AmTr_v1.0_scaffold00148.5 0.8969642815701618 40 AMTR_s00029p00096200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component evm_27.TU.AmTr_v1.0_scaffold00029.89 0.8954218934731987 42 AMTR_s00009p00267690 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase ATCPL1, CPL1, FRY2, evm_27.TU.AmTr_v1.0_scaffold00009.409 0.8954119157740675 71 AMTR_s00066p00113660 Protein degradation.ER-associated protein degradation (ERAD) machinery.HRD1 ubiquitin ligase component evm_27.TU.AmTr_v1.0_scaffold00066.104 0.8951849599594831 44 AMTR_s00036p00114630 External stimuli response.biotic stress.systemic acquired resistance (SAR).NPR1 regulator protein NPR1, SAI1, ATNPR1, NIM1, evm_27.TU.AmTr_v1.0_scaffold00036.47 0.8940535234744457 45 AMTR_s00033p00240560 evm_27.TU.AmTr_v1.0_scaffold00033.258 0.8940501091582055 46 AMTR_s00177p00048180 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.25 0.8936887835495188 61 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana NSL1, evm_27.TU.AmTr_v1.0_scaffold00068.151 0.8928645197816116 50 AMTR_s00041p00031550 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor evm_27.TU.AmTr_v1.0_scaffold00041.15 0.8912809490818544 54 AMTR_s00145p00081540 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex.MON1/SAND component evm_27.TU.AmTr_v1.0_scaffold00145.30 0.889574360130203 61 AMTR_s00019p00254550 COP1-interactive protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.435 0.8890174325406446 63 AMTR_s00029p00079800 RNA biosynthesis.transcriptional activation.HUA2 transcription factor HUA2, evm_27.TU.AmTr_v1.0_scaffold00029.74 0.8879238400838265 64 AMTR_s00036p00036310 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00036.9 0.8870695834066794 100 AMTR_s00146p00098380 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.ISY1/MAC8 component evm_27.TU.AmTr_v1.0_scaffold00146.59 0.886507536951625 66 AMTR_s00132p00051080 Protein DJ-1 homolog C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00132.13 0.8864403098776333 67 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor SYD, CHR3, evm_27.TU.AmTr_v1.0_scaffold00090.83 0.8857214073138423 68 AMTR_s00030p00014690 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor evm_27.TU.AmTr_v1.0_scaffold00030.3 0.8855706675228975 69 AMTR_s00002p00250180 RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT5 component GTA02, GTA2, evm_27.TU.AmTr_v1.0_scaffold00002.351 0.8829402237839428 72 AMTR_s00009p00237790 evm_27.TU.AmTr_v1.0_scaffold00009.200 0.8820059620740075 74 AMTR_s00080p00131040 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase HERK1, evm_27.TU.AmTr_v1.0_scaffold00080.56 0.8810789757524076 77 AMTR_s00055p00173600 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL5, evm_27.TU.AmTr_v1.0_scaffold00055.90 0.8810707322483415 78 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP, evm_27.TU.AmTr_v1.0_scaffold00009.205 0.8810321377719551 79 AMTR_s00009p00236500 Uncharacterized protein At3g49055 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.197 0.8804688748754855 83 AMTR_s00057p00152610 evm_27.TU.AmTr_v1.0_scaffold00057.140 0.8798176175212962 87 AMTR_s00010p00257770 evm_27.TU.AmTr_v1.0_scaffold00010.405 0.8796454851025671 88 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.8789943898803889 91 AMTR_s00159p00062660 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter ABCA1, AtABCA1, evm_27.TU.AmTr_v1.0_scaffold00159.26 0.8787367382843883 94 AMTR_s00057p00042800 RNA biosynthesis.transcriptional activation.CAMTA transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.23 0.8784778781313451 96 AMTR_s00037p00185170 evm_27.TU.AmTr_v1.0_scaffold00037.91 0.8782686858146685 98 AMTR_s00146p00059560 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin ATXIK, XI-17, XIK, evm_27.TU.AmTr_v1.0_scaffold00146.36 0.8781006070139586 100