Sequence Description Alias PCC hrr AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP, evm_27.TU.AmTr_v1.0_scaffold00009.205 0.9071451892049929 2 AMTR_s00001p00152770 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS, evm_27.TU.AmTr_v1.0_scaffold00001.137 0.901131724472185 6 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component CPSF30, ATCPSF30, evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8935041116442286 8 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component CUM2, EIF4G, evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8866219341965397 38 AMTR_s00154p00086540 Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00154.56 0.8857653271434467 6 AMTR_s00001p00263690 evm_27.TU.AmTr_v1.0_scaffold00001.395 0.885239619578897 6 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor TPR1, evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8832715587809973 14 AMTR_s00038p00121420 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG, evm_27.TU.AmTr_v1.0_scaffold00038.67 0.8814957329963304 31 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8813759927518638 9 AMTR_s00157p00058850 evm_27.TU.AmTr_v1.0_scaffold00157.24 0.880814109195132 10 AMTR_s00247p00011460 Protein biosynthesis.translation initiation.eIF5B Met-tRNA positioning factor evm_27.TU.AmTr_v1.0_scaffold00247.2 0.8795020435015628 11 AMTR_s00077p00124730 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR, evm_27.TU.AmTr_v1.0_scaffold00077.118 0.8779451268484357 12 AMTR_s00023p00015970 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00023.4 0.8768012027299757 31 AMTR_s00029p00096200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component evm_27.TU.AmTr_v1.0_scaffold00029.89 0.8763418528042228 27 AMTR_s00004p00270220 evm_27.TU.AmTr_v1.0_scaffold00004.293 0.8716995768225965 15 AMTR_s00060p00030440 evm_27.TU.AmTr_v1.0_scaffold00060.6 0.8712453974570205 22 AMTR_s00065p00171490 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Fip1 component FIP1[V], ATFIP1[V], FIPS5, ATFIPS5, evm_27.TU.AmTr_v1.0_scaffold00065.140 0.8699846050364318 17 AMTR_s00003p00267060 0.8680978225148436 18 AMTR_s00140p00108000 evm_27.TU.AmTr_v1.0_scaffold00140.53 0.8653400292592008 19 AMTR_s00071p00188270 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component ATUPF3, UPF3, evm_27.TU.AmTr_v1.0_scaffold00071.198 0.8623521013129274 47 AMTR_s00099p00154370 evm_27.TU.AmTr_v1.0_scaffold00099.148 0.8622875219594661 21 AMTR_s00037p00121600 Protein FORGETTER 1 OS=Arabidopsis thaliana EMB1135, evm_27.TU.AmTr_v1.0_scaffold00037.49 0.8617963742874003 61 AMTR_s00027p00244500 Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.150 0.8588973462507401 25 AMTR_s00056p00074670 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP35 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00056.54 0.857750488884686 26 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8576502498376911 30 AMTR_s00046p00170580 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein SMG7, evm_27.TU.AmTr_v1.0_scaffold00046.93 0.8571396814661874 28 AMTR_s00157p00058990 evm_27.TU.AmTr_v1.0_scaffold00157.24 0.8566062524969674 29 AMTR_s00009p00255480 FT-interacting protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.279 0.8554794340060197 30 AMTR_s00021p00249200 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.NADH-dependent glutamate synthase GLT1, evm_27.TU.AmTr_v1.0_scaffold00021.277 0.8532727186048445 31 AMTR_s00009p00235710 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IX kinase families.RLCK-IXb kinase evm_27.TU.AmTr_v1.0_scaffold00009.195 0.8508937735259346 32 AMTR_s00065p00122030 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.72 0.8480909806567724 33 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8446185462106701 57 AMTR_s00145p00075460 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter PGP20, evm_27.TU.AmTr_v1.0_scaffold00145.27 0.8431102618169751 38 AMTR_s00054p00189880 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00054.72 0.8429275435572853 42 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.8426790794105689 40 AMTR_s00142p00054380 RNA processing.RNA quality control Exon Junction complex (EJC).core components.CASC3 component evm_27.TU.AmTr_v1.0_scaffold00142.31 0.8403910505526497 43 AMTR_s00004p00164270 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00004.181 0.8381997007911677 47 AMTR_s00009p00164260 Eukaryotic translation initiation factor isoform 4G-1 OS=Arabidopsis thaliana eIFiso4G1, evm_27.TU.AmTr_v1.0_scaffold00009.92 0.8379689544519341 48 AMTR_s00091p00075480 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00091.22 0.8376658354194493 49 AMTR_s00125p00118080 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter KUP10, evm_27.TU.AmTr_v1.0_scaffold00125.31 0.8372122665915405 96 AMTR_s00016p00153170 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster H/CPL phosphatase ATCPL3, CPL3, evm_27.TU.AmTr_v1.0_scaffold00016.110 0.8368870910004108 52 AMTR_s00148p00030810 Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica DRB2, evm_27.TU.AmTr_v1.0_scaffold00148.13 0.8358547629015952 53 AMTR_s00004p00150000 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Efl1 elongation-factor-like regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00004.154 0.8345405625106836 56 AMTR_s00067p00056670 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.CDC5/MAC1 component ATCDC5, ATMYBCDC5, CDC5, evm_27.TU.AmTr_v1.0_scaffold00067.33 0.834418352573837 57 AMTR_s00029p00219930 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor SE, evm_27.TU.AmTr_v1.0_scaffold00029.336 0.8340011513883442 61 AMTR_s00110p00125440 Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.100 0.8339965586059757 60 AMTR_s00055p00140570 evm_27.TU.AmTr_v1.0_scaffold00055.62 0.8338460646725583 61 AMTR_s00010p00267890 Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase PME31, ATPME31, evm_27.TU.AmTr_v1.0_scaffold00010.545 0.8324045809096166 66 AMTR_s00040p00171130 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component evm_27.TU.AmTr_v1.0_scaffold00040.153 0.8304427585789255 70 AMTR_s00001p00252660 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component ELF7, evm_27.TU.AmTr_v1.0_scaffold00001.325 0.8296457989266395 89 AMTR_s00017p00257250 DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00017.286 0.8295454397625095 72 AMTR_s00058p00188470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00058.186 0.8280263040445275 77 AMTR_s00154p00048010 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XV kinase CLI1, RPK2, TOAD2, evm_27.TU.AmTr_v1.0_scaffold00154.29 0.8237641333201008 85 AMTR_s00053p00098350 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component CHR5, evm_27.TU.AmTr_v1.0_scaffold00053.55 0.8237502252058099 86 AMTR_s00096p00044620 evm_27.TU.AmTr_v1.0_scaffold00096.18 0.8235565806911469 87 AMTR_s00059p00117370 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component emb2444, evm_27.TU.AmTr_v1.0_scaffold00059.91 0.8232932049048047 94 AMTR_s00003p00079190 External stimuli response.temperature.temperature sensors.PHY-B temperature sensor protein HY3, OOP1, PHYB, evm_27.TU.AmTr_v1.0_scaffold00003.45 0.8224923586793159 91 AMTR_s00033p00211330 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1, evm_27.TU.AmTr_v1.0_scaffold00033.185 0.8221917847709582 92 AMTR_s00153p00079500 Pentatricopeptide repeat-containing protein At3g56030, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.43 0.8220728653286968 93 AMTR_s00078p00186900 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.192 0.8201388914544164 97