Sequence Description Alias PCC hrr AMTR_s00041p00058440 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS4 component evm_27.TU.AmTr_v1.0_scaffold00041.31 0.8877217315034299 34 AMTR_s00125p00122100 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.OST3/6 component evm_27.TU.AmTr_v1.0_scaffold00125.32 0.8701573252402763 8 AMTR_s00044p00018360 Plant UBX domain-containing protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.4 0.8690208753611285 3 AMTR_s00097p00149320 Cell cycle.organelle machineries.organelle fission.plastid division.PDV ARC5-recruitment factor PDV1, evm_27.TU.AmTr_v1.0_scaffold00097.47 0.8680193341171689 5 AMTR_s00121p00130180 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component HAP1, MEE63, MAGO, evm_27.TU.AmTr_v1.0_scaffold00121.38 0.8657581467832441 15 AMTR_s00048p00077520 Binding partner of ACD11 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.36 0.864089819315877 17 AMTR_s00049p00078900 Chromatin organisation.chromatin remodeling complexes.RVB helicase component evm_27.TU.AmTr_v1.0_scaffold00049.50 0.8611015517631865 18 AMTR_s00010p00251310 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS29 component MAG1, VPS29, ATVPS29, evm_27.TU.AmTr_v1.0_scaffold00010.359 0.8584250117541663 53 AMTR_s00006p00267780 evm_27.TU.AmTr_v1.0_scaffold00006.304 0.8574629975721756 34 AMTR_s00135p00091990 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component RP1, RPL3A, emb2207, ARP1, evm_27.TU.AmTr_v1.0_scaffold00135.49 0.8553318280300851 63 AMTR_s00017p00094950 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27a component UBQ6, evm_27.TU.AmTr_v1.0_scaffold00017.35 0.8541398797344961 75 AMTR_s00046p00076360 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS16 component evm_27.TU.AmTr_v1.0_scaffold00046.31 0.8520446456118181 40 AMTR_s00072p00050030 E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.18 0.8489872870008396 27 AMTR_s00003p00234980 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component evm_27.TU.AmTr_v1.0_scaffold00003.236 0.8486976108757098 80 AMTR_s00006p00265840 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component evm_27.TU.AmTr_v1.0_scaffold00006.282 0.8477482051311402 54 AMTR_s00002p00265480 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component PFD4, AIP3, evm_27.TU.AmTr_v1.0_scaffold00002.498 0.8456855178237332 26 AMTR_s00068p00034280 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 5 NRPD5, ATRPABC24.3, NRPB5, RPB5A, evm_27.TU.AmTr_v1.0_scaffold00068.11 0.8448365060003131 35 AMTR_s00164p00063950 evm_27.TU.AmTr_v1.0_scaffold00164.28 0.843208529627311 24 AMTR_s00065p00177470 Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana SDF2, AtSDF2, ATSDL, evm_27.TU.AmTr_v1.0_scaffold00065.147 0.8429503841328657 31 AMTR_s00056p00181790 Protein degradation.peptidase families.cysteine-type peptidase activities.PPPDE-type peptidase evm_27.TU.AmTr_v1.0_scaffold00056.161 0.8421284622550889 29 AMTR_s00008p00026380 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase AtRABA4a, RABA4a, evm_27.TU.AmTr_v1.0_scaffold00008.8 0.8419967850721276 21 AMTR_s00002p00271660 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component evm_27.TU.AmTr_v1.0_scaffold00002.635 0.8417711815095943 93 AMTR_s00024p00219330 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3 component evm_27.TU.AmTr_v1.0_scaffold00024.211 0.8401219450232055 94 AMTR_s00137p00025010 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component SKIP1, evm_27.TU.AmTr_v1.0_scaffold00137.4 0.8389855820447845 24 AMTR_s00001p00250710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS10 component evm_27.TU.AmTr_v1.0_scaffold00001.317 0.8378397543474845 99 AMTR_s00018p00200030 evm_27.TU.AmTr_v1.0_scaffold00018.119 0.8371086401429452 56 AMTR_s00002p00271890 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DNA methylation accessory complex (DDR).RDM1 component RDM1, evm_27.TU.AmTr_v1.0_scaffold00002.646 0.8365698456950128 27 AMTR_s00023p00210590 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component evm_27.TU.AmTr_v1.0_scaffold00023.154 0.8363829617709709 28 AMTR_s00061p00048280 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN6 component CSN6A, evm_27.TU.AmTr_v1.0_scaffold00061.24 0.834015995161319 65 AMTR_s00068p00184270 Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.144 0.8325008706679897 91 AMTR_s00089p00040540 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13a component evm_27.TU.AmTr_v1.0_scaffold00089.11 0.832078540760661 90 AMTR_s00019p00244000 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase ATSPP, SPP, evm_27.TU.AmTr_v1.0_scaffold00019.366 0.8313589243473837 43 AMTR_s00074p00037630 evm_27.TU.AmTr_v1.0_scaffold00074.6 0.8297654386117763 33 AMTR_s00129p00094040 evm_27.TU.AmTr_v1.0_scaffold00129.66 0.8292346586132775 49 AMTR_s00088p00173270 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-WNK kinase evm_27.TU.AmTr_v1.0_scaffold00088.148 0.8271804934555117 61 AMTR_s00045p00206320 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL29 component evm_27.TU.AmTr_v1.0_scaffold00045.273 0.8238725355316746 44 AMTR_s00029p00198320 Protein modification.acetylation.NatE-type N-terminal acetylase evm_27.TU.AmTr_v1.0_scaffold00029.273 0.8235806591614835 67 AMTR_s00032p00201500 evm_27.TU.AmTr_v1.0_scaffold00032.190 0.8206868386187504 43 AMTR_s00065p00088770 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL26 component evm_27.TU.AmTr_v1.0_scaffold00065.49 0.8174800955353954 68 AMTR_s00077p00156290 evm_27.TU.AmTr_v1.0_scaffold00077.159 0.8169922711682717 49 AMTR_s00086p00180250 evm_27.TU.AmTr_v1.0_scaffold00086.118 0.8147428449209178 50 AMTR_s00059p00041690 evm_27.TU.AmTr_v1.0_scaffold00059.25 0.8124237237921879 65 AMTR_s00133p00113640 evm_27.TU.AmTr_v1.0_scaffold00133.58 0.8123771695433585 56 AMTR_s00001p00047670 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D3 component evm_27.TU.AmTr_v1.0_scaffold00001.27 0.8097543265145384 58 AMTR_s00096p00110370 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ATARFA1B, ARFA1B 0.8088820313638011 84 AMTR_s00057p00216750 Coenzyme metabolism.coenzyme A synthesis.dephospho-coenzyme A kinase ATCOAE, evm_27.TU.AmTr_v1.0_scaffold00057.275 0.8081276138363492 62 AMTR_s00109p00031400 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS8 component evm_27.TU.AmTr_v1.0_scaffold00109.18 0.8079673793826028 100 AMTR_s00111p00023340 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL15 component evm_27.TU.AmTr_v1.0_scaffold00111.6 0.8060285578821113 87 AMTR_s00055p00220020 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component PBF1, evm_27.TU.AmTr_v1.0_scaffold00055.168 0.8058256407552912 66 AMTR_s00002p00269620 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ARFC1, ATARFC1, evm_27.TU.AmTr_v1.0_scaffold00002.552 0.8044949708950896 67 AMTR_s00070p00186600 evm_27.TU.AmTr_v1.0_scaffold00070.119 0.8019777072512189 75 AMTR_s00066p00072310 Protein biosynthesis.translation elongation.eEF1A aminoacyl-tRNA binding factor evm_27.TU.AmTr_v1.0_scaffold00066.50 0.8013560451483462 71 AMTR_s00038p00194050 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A, evm_27.TU.AmTr_v1.0_scaffold00038.139 0.797635792360268 79 AMTR_s00069p00158350 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27a component evm_27.TU.AmTr_v1.0_scaffold00069.129 0.797580094146587 80 AMTR_s00068p00119380 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS5 component RPS5B, ATRPS5B, evm_27.TU.AmTr_v1.0_scaffold00068.75 0.7973033365053614 82 AMTR_s00058p00204160 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component evm_27.TU.AmTr_v1.0_scaffold00058.212 0.7957196078495012 93 AMTR_s00137p00066590 Cell wall.pectin.homogalacturonan.synthesis.CGR-type methyltransferase evm_27.TU.AmTr_v1.0_scaffold00137.28 0.7936020384072071 88 AMTR_s00007p00012260 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component evm_27.TU.AmTr_v1.0_scaffold00007.1 0.7934366956362935 89 AMTR_s00151p00046880 Chromatin organisation.histone modifications.histone deacetylation.SHL1 histone deacetylation complex recruiting protein EBS, evm_27.TU.AmTr_v1.0_scaffold00151.6 0.7933404674011828 90 AMTR_s00004p00269230 Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica ATPDI12, PDI12, PDIL5-3, ATPDIL5-3, evm_27.TU.AmTr_v1.0_scaffold00004.280 0.7909809833458571 99 AMTR_s00099p00087020 evm_27.TU.AmTr_v1.0_scaffold00099.65 0.7902965363518889 96 AMTR_s00007p00074210 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein ATSYP61, OSM1, SYP61, evm_27.TU.AmTr_v1.0_scaffold00007.40 0.7885176612857472 98