Sequence Description Alias PCC hrr AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.9474167248876318 1 AMTR_s00099p00159350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) evm_27.TU.AmTr_v1.0_scaffold00099.158 0.9391497386325827 6 AMTR_s00095p00128730 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component ACSF, CHL27, CRD1, evm_27.TU.AmTr_v1.0_scaffold00095.88 0.9363407918797206 3 AMTR_s00002p00256470 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.408 0.9293246433919448 15 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3, evm_27.TU.AmTr_v1.0_scaffold00044.141 0.928102813108497 12 AMTR_s00059p00166490 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component evm_27.TU.AmTr_v1.0_scaffold00059.157 0.9236780747777354 10 AMTR_s00101p00121540 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.95 0.9211363836103884 14 AMTR_s00029p00122880 Disease resistance protein RPS5 OS=Arabidopsis thaliana RPS5, evm_27.TU.AmTr_v1.0_scaffold00029.137 0.9201899449682398 13 AMTR_s00119p00060890 Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana VAR3, evm_27.TU.AmTr_v1.0_scaffold00119.41 0.9189148037711856 9 AMTR_s00019p00236430 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component ATCNFU3, NFU3, evm_27.TU.AmTr_v1.0_scaffold00019.332 0.9169860110051187 10 AMTR_s00058p00167600 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATCYP38, CYP38, evm_27.TU.AmTr_v1.0_scaffold00058.152 0.9151528101324898 15 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.25 0.9140803158630976 33 AMTR_s00010p00265920 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB4/NDF6 component NDF6, evm_27.TU.AmTr_v1.0_scaffold00010.515 0.9127972640553548 22 AMTR_s01016p00008750 ABC transporter G family member 22 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold01016.1 0.9117850030488074 14 AMTR_s00087p00141000 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaL PSAL, evm_27.TU.AmTr_v1.0_scaffold00087.44 0.9117185059678291 41 AMTR_s00025p00248060 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGD, SIG4, evm_27.TU.AmTr_v1.0_scaffold00025.401 0.9107734261195586 18 AMTR_s00004p00065250 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein ZKT, evm_27.TU.AmTr_v1.0_scaffold00004.48 0.9089519047211868 24 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.9081751817768979 23 AMTR_s00034p00145870 evm_27.TU.AmTr_v1.0_scaffold00034.44 0.9076557983617537 19 AMTR_s00006p00252810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88, evm_27.TU.AmTr_v1.0_scaffold00006.165 0.9072640106688122 35 AMTR_s00055p00165940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761, evm_27.TU.AmTr_v1.0_scaffold00055.86 0.9058651740717097 22 AMTR_s00022p00112770 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component evm_27.TU.AmTr_v1.0_scaffold00022.100 0.9053530900345633 22 AMTR_s00069p00125390 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 crr1, evm_27.TU.AmTr_v1.0_scaffold00069.85 0.9051406450404671 23 AMTR_s00049p00176170 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase evm_27.TU.AmTr_v1.0_scaffold00049.168 0.9049346751401991 42 AMTR_s00021p00213260 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter TPT, APE2, evm_27.TU.AmTr_v1.0_scaffold00021.188 0.9045291869048092 25 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.9042353268764078 26 AMTR_s00109p00068030 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaH PSAH-1, evm_27.TU.AmTr_v1.0_scaffold00109.52 0.9042201963109199 39 AMTR_s00012p00257120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component PTAC16, evm_27.TU.AmTr_v1.0_scaffold00012.301 0.9017281282624761 76 AMTR_s00009p00268600 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR POR C, PORC, evm_27.TU.AmTr_v1.0_scaffold00009.428 0.9015167616564412 29 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.9012905028936901 44 AMTR_s00049p00119540 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin ATF1, TRXF1, evm_27.TU.AmTr_v1.0_scaffold00049.94 0.9009799141292644 31 AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.9003622298846925 68 AMTR_s00109p00113060 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.tocopherol cyclase (VTE1/TC) ATSDX1, VTE1, evm_27.TU.AmTr_v1.0_scaffold00109.111 0.9003144956168845 39 AMTR_s00007p00156370 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4, evm_27.TU.AmTr_v1.0_scaffold00007.117 0.8995630711202313 37 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8, evm_27.TU.AmTr_v1.0_scaffold00010.427 0.8964252020516819 35 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.8963553341989873 38 AMTR_s00057p00165960 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase PCB2, evm_27.TU.AmTr_v1.0_scaffold00057.167 0.8952553002960517 37 AMTR_s00001p00272260 Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana PTAC8, TMP14, PSI-P, PSAP, evm_27.TU.AmTr_v1.0_scaffold00001.510 0.8947400206608851 43 AMTR_s00006p00260480 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00006.222 0.8936660803129389 47 AMTR_s00003p00270950 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR9 evm_27.TU.AmTr_v1.0_scaffold00003.446 0.8932519054833842 40 AMTR_s00109p00146830 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB3/NDF4 component NDF4, evm_27.TU.AmTr_v1.0_scaffold00109.159 0.8906887888404945 41 AMTR_s00023p00186390 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor RPT1, PHOT1, NPH1, JK224, evm_27.TU.AmTr_v1.0_scaffold00023.124 0.8895034559226326 42 AMTR_s00078p00084050 evm_27.TU.AmTr_v1.0_scaffold00078.57 0.8893186203127182 63 AMTR_s00004p00145140 evm_27.TU.AmTr_v1.0_scaffold00004.142 0.8891812712620243 63 AMTR_s00149p00054540 Photosynthesis.photorespiration.glycine cleavage system.H-protein lipoamide-containing component evm_27.TU.AmTr_v1.0_scaffold00149.34 0.8886555355732099 83 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana WEB1, evm_27.TU.AmTr_v1.0_scaffold00029.410 0.8875627426328832 88 AMTR_s00002p00210720 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL19 component evm_27.TU.AmTr_v1.0_scaffold00002.217 0.8872657943543532 78 AMTR_s00142p00060790 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101, evm_27.TU.AmTr_v1.0_scaffold00142.34 0.8870748894753958 83 AMTR_s00045p00150380 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana FdC1, evm_27.TU.AmTr_v1.0_scaffold00045.162 0.8856442779003821 52 AMTR_s00007p00219480 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2, evm_27.TU.AmTr_v1.0_scaffold00007.207 0.883114169806959 94 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD1, evm_27.TU.AmTr_v1.0_scaffold00047.38 0.8830366459933949 94 AMTR_s00075p00091010 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME1, evm_27.TU.AmTr_v1.0_scaffold00075.28 0.8823836910116007 59 AMTR_s00002p00254720 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT10, GMN10, MRS2-11, ATMGT10, evm_27.TU.AmTr_v1.0_scaffold00002.387 0.8823373810238062 56 AMTR_s00022p00249930 emb2738, evm_27.TU.AmTr_v1.0_scaffold00022.381 0.8818947488861343 96 AMTR_s00004p00153830 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter evm_27.TU.AmTr_v1.0_scaffold00004.160 0.8815955688011692 58 AMTR_s00149p00069450 evm_27.TU.AmTr_v1.0_scaffold00149.48 0.8814504611440587 59 AMTR_s00018p00092490 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaO PSAO, evm_27.TU.AmTr_v1.0_scaffold00018.41 0.8812804467021828 60 AMTR_s00025p00248100 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL, evm_27.TU.AmTr_v1.0_scaffold00025.402 0.8810322067387556 61 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8804705784066683 66 AMTR_s00122p00077720 Photosynthesis.photorespiration.glycerate kinase evm_27.TU.AmTr_v1.0_scaffold00122.28 0.8803737136515555 77 AMTR_s00058p00193720 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase LSF1, evm_27.TU.AmTr_v1.0_scaffold00058.193 0.8802551298924213 74 AMTR_s00040p00174940 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.165 0.8799307818815475 100 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.8799176564951814 66 AMTR_s00044p00085200 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.57 0.8793688682815224 67 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.8790347267636288 68 AMTR_s00039p00114830 evm_27.TU.AmTr_v1.0_scaffold00039.71 0.8781427012257924 70 AMTR_s00003p00212290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1, evm_27.TU.AmTr_v1.0_scaffold00003.203 0.8781146191368702 96 AMTR_s00025p00042290 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL1, ADG2, evm_27.TU.AmTr_v1.0_scaffold00025.21 0.878103135476387 80 AMTR_s00044p00105130 evm_27.TU.AmTr_v1.0_scaffold00044.75 0.8777384462137887 89 AMTR_s00092p00018230 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.4 0.8773598421218067 87 AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL, evm_27.TU.AmTr_v1.0_scaffold00015.112 0.8766348555712575 75 AMTR_s00027p00217960 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.81 0.8758981006499273 77 AMTR_s00056p00191070 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00056.177 0.8753964711053985 79 AMTR_s00029p00095840 Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.88 0.8750758272181905 80 AMTR_s00036p00206170 evm_27.TU.AmTr_v1.0_scaffold00036.123 0.8749719511185999 98 AMTR_s00120p00054610 evm_27.TU.AmTr_v1.0_scaffold00120.17 0.8740592210714544 83 AMTR_s00043p00168880 BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00043.37 0.8734682197263043 83 AMTR_s00032p00148610 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbTn PSBTN, evm_27.TU.AmTr_v1.0_scaffold00032.114 0.872785104479147 84 AMTR_s00010p00141760 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.dehydroascorbate reductase (DHAR) DHAR3, evm_27.TU.AmTr_v1.0_scaffold00010.104 0.872479818886854 85 AMTR_s00022p00232380 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit delta ATPD, evm_27.TU.AmTr_v1.0_scaffold00022.315 0.8719617241817421 92 AMTR_s00061p00050140 evm_27.TU.AmTr_v1.0_scaffold00061.26 0.8719585246542556 88 AMTR_s00171p00047960 evm_27.TU.AmTr_v1.0_scaffold00171.29 0.8710891898692362 91 AMTR_s00101p00054450 evm_27.TU.AmTr_v1.0_scaffold00101.26 0.8708312318234721 92 AMTR_s00103p00071860 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (ERD6-type) evm_27.TU.AmTr_v1.0_scaffold00103.38 0.8705565536232427 93 AMTR_s00135p00117490 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase evm_27.TU.AmTr_v1.0_scaffold00135.68 0.8683831264743139 96 AMTR_s00029p00083110 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136, evm_27.TU.AmTr_v1.0_scaffold00029.76 0.8678853884061075 99