Sequence Description Alias PCC hrr AMTR_s00160p00027870 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS5 component evm_27.TU.AmTr_v1.0_scaffold00160.6 0.9278942931588892 1 AMTR_s00016p00073950 evm_27.TU.AmTr_v1.0_scaffold00016.37 0.9275382084533118 5 AMTR_s00018p00243310 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase CHLM, evm_27.TU.AmTr_v1.0_scaffold00018.150 0.9269574117313351 7 AMTR_s00032p00120910 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor IDD4, AtIDD4, evm_27.TU.AmTr_v1.0_scaffold00032.84 0.9265467607772192 4 AMTR_s00025p00237880 evm_27.TU.AmTr_v1.0_scaffold00025.357 0.9258563342515965 5 AMTR_s00077p00179590 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.LCAA scaffolding component evm_27.TU.AmTr_v1.0_scaffold00077.201 0.9258358663400824 6 AMTR_s00003p00212290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1, evm_27.TU.AmTr_v1.0_scaffold00003.203 0.9192063354095747 14 AMTR_s00061p00032260 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana PDE322, CP33, evm_27.TU.AmTr_v1.0_scaffold00061.6 0.9154184644672971 16 AMTR_s00029p00221060 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL4 component RPL4, evm_27.TU.AmTr_v1.0_scaffold00029.338 0.9148085337373942 26 AMTR_s00001p00208370 evm_27.TU.AmTr_v1.0_scaffold00001.211 0.9096519521395949 10 AMTR_s00004p00107700 Protein modification.peptide maturation.plastid.EGY protease EGY1, evm_27.TU.AmTr_v1.0_scaffold00004.86 0.9083765805868038 36 AMTR_s00003p00168720 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138, evm_27.TU.AmTr_v1.0_scaffold00003.145 0.9080572167121181 48 AMTR_s00021p00119000 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL34 component evm_27.TU.AmTr_v1.0_scaffold00021.66 0.9079795471270151 13 AMTR_s00053p00152680 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.100 0.9061889749876915 24 AMTR_s00011p00258380 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, evm_27.TU.AmTr_v1.0_scaffold00011.182 0.9036235312188844 15 AMTR_s00021p00200120 evm_27.TU.AmTr_v1.0_scaffold00021.166 0.903389260859508 19 AMTR_s00023p00218670 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component evm_27.TU.AmTr_v1.0_scaffold00023.162 0.9031097453705119 17 AMTR_s00062p00189550 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase PGK1, evm_27.TU.AmTr_v1.0_scaffold00062.192 0.9028411256224727 50 AMTR_s00002p00100650 evm_27.TU.AmTr_v1.0_scaffold00002.59 0.9021523859323051 38 AMTR_s00156p00076210 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component RPL15, evm_27.TU.AmTr_v1.0_scaffold00156.37 0.8943230757873534 20 AMTR_s00122p00139490 Root phototropism protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00122.75 0.8936047547212607 21 AMTR_s00025p00209580 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component SECE1, evm_27.TU.AmTr_v1.0_scaffold00025.276 0.8927854916979617 22 AMTR_s00007p00097240 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP2/TAC2 component PTAC2, evm_27.TU.AmTr_v1.0_scaffold00007.57 0.8925886385307155 23 AMTR_s00135p00058090 Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00135.24 0.8916091826416456 24 AMTR_s00021p00230830 evm_27.TU.AmTr_v1.0_scaffold00021.226 0.889758961640711 25 AMTR_s00054p00125650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL21 component evm_27.TU.AmTr_v1.0_scaffold00054.40 0.8896543861374879 47 AMTR_s00062p00201460 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor CaS, evm_27.TU.AmTr_v1.0_scaffold00062.212 0.8895602532421586 38 AMTR_s00071p00185160 evm_27.TU.AmTr_v1.0_scaffold00071.193 0.8893951577397702 28 AMTR_s00010p00268080 evm_27.TU.AmTr_v1.0_scaffold00010.548 0.8890859324966308 29 AMTR_s00002p00271020 VAN3-binding protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.606 0.8890594552421931 30 AMTR_s00039p00160690 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb28 protein PSB28, evm_27.TU.AmTr_v1.0_scaffold00039.114 0.8868098908056066 42 AMTR_s00005p00203240 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312, evm_27.TU.AmTr_v1.0_scaffold00005.80 0.8862803577292079 32 AMTR_s00054p00095350 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase ATHDA14, hda14, evm_27.TU.AmTr_v1.0_scaffold00054.32 0.8860333604502532 88 AMTR_s00043p00203580 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00043.64 0.8846540920599849 54 AMTR_s00053p00151810 Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.99 0.8826318788412527 36 AMTR_s00027p00044970 evm_27.TU.AmTr_v1.0_scaffold00027.5 0.8822437184781606 37 AMTR_s00078p00084050 evm_27.TU.AmTr_v1.0_scaffold00078.57 0.8817228484062228 78 AMTR_s00032p00221170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst ATFKBP13, FKBP13, evm_27.TU.AmTr_v1.0_scaffold00032.228 0.8809848813106855 39 AMTR_s00092p00167540 Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond CH42, CHLI1, CH-42, CHL11, CHLI-1, evm_27.TU.AmTr_v1.0_scaffold00092.149 0.8808410788032971 57 AMTR_s00166p00060690 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00166.36 0.8793465395372007 42 AMTR_s00029p00223030 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2, evm_27.TU.AmTr_v1.0_scaffold00029.342 0.8789714540738595 45 AMTR_s00024p00238310 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana YLMG2, ATYLMG2, evm_27.TU.AmTr_v1.0_scaffold00024.270 0.8783281157752421 44 AMTR_s00127p00060060 RNA biosynthesis.transcriptional activation.MADS box transcription factor SVP, AGL22, evm_27.TU.AmTr_v1.0_scaffold00127.17 0.8773489924453249 45 AMTR_s00029p00083110 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136, evm_27.TU.AmTr_v1.0_scaffold00029.76 0.8771034751763892 49 AMTR_s00177p00036720 evm_27.TU.AmTr_v1.0_scaffold00177.14 0.877080735175532 47 AMTR_s00005p00239290 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) TZ, THI4, THI1, evm_27.TU.AmTr_v1.0_scaffold00005.125 0.8769182273693406 51 AMTR_s00071p00016000 Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin ATHM2, evm_27.TU.AmTr_v1.0_scaffold00071.5 0.8765225531256072 77 AMTR_s00036p00227270 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) evm_27.TU.AmTr_v1.0_scaffold00036.168 0.8764136799240781 50 AMTR_s00004p00079400 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor NDF5 NDF5, evm_27.TU.AmTr_v1.0_scaffold00004.63 0.876049224613487 95 AMTR_s00049p00052690 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor GUN4, evm_27.TU.AmTr_v1.0_scaffold00049.26 0.8753447815366721 65 AMTR_s00189p00032350 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb1/2/3-type component LHCB1.3, CAB140, AB140, CAB1, evm_27.TU.AmTr_v1.0_scaffold00189.5 0.8752633774904658 53 AMTR_s00109p00129480 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor emb2726, evm_27.TU.AmTr_v1.0_scaffold00109.135 0.8749006699923235 77 AMTR_s00022p00205270 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase ATLOX2, LOX2, evm_27.TU.AmTr_v1.0_scaffold00022.242 0.8740867334278402 56 AMTR_s00007p00256990 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.amylose synthesis regulatory scaffold protein evm_27.TU.AmTr_v1.0_scaffold00007.305 0.8738282617221457 57 AMTR_s00099p00163300 RNA biosynthesis.transcriptional activation.NAC transcription factor ANAC034, LOV1, ANAC035, NAC035, evm_27.TU.AmTr_v1.0_scaffold00099.164 0.8727114440104969 80 AMTR_s00010p00262670 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP evm_27.TU.AmTr_v1.0_scaffold00010.474 0.8723311473441334 59 AMTR_s00001p00259120 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL5 component evm_27.TU.AmTr_v1.0_scaffold00001.365 0.8695877353232259 61 AMTR_s00006p00259220 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase HEMB1, evm_27.TU.AmTr_v1.0_scaffold00006.214 0.8695148030648773 63 AMTR_s00032p00227150 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00032.244 0.8691559027619088 64 AMTR_s00007p00263960 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) ATPRX Q, evm_27.TU.AmTr_v1.0_scaffold00007.343 0.8687922673995231 88 AMTR_s00016p00164160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, evm_27.TU.AmTr_v1.0_scaffold00016.120 0.8681710651649669 66 AMTR_s00021p00158020 RNA biosynthesis.transcriptional activation.TCP transcription factor TCP4, MEE35, evm_27.TU.AmTr_v1.0_scaffold00021.111 0.8672800369221783 68 AMTR_s00032p00226710 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1, evm_27.TU.AmTr_v1.0_scaffold00032.243 0.8626856360419661 78 AMTR_s00049p00227880 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor ATRAB8D, ATRABE1B, RABE1b, evm_27.TU.AmTr_v1.0_scaffold00049.275 0.8601883817397015 77 AMTR_s00028p00227970 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB4 component CCB4, evm_27.TU.AmTr_v1.0_scaffold00028.110 0.858912233750287 93 AMTR_s00092p00096920 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1, evm_27.TU.AmTr_v1.0_scaffold00092.54 0.8588577414427709 79 AMTR_s00039p00224760 evm_27.TU.AmTr_v1.0_scaffold00039.203 0.8585871564053492 80 AMTR_s00068p00188920 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS20 component evm_27.TU.AmTr_v1.0_scaffold00068.152 0.8584786001507997 82 AMTR_s00039p00224840 evm_27.TU.AmTr_v1.0_scaffold00039.204 0.8555819975782413 87 AMTR_s00037p00234060 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component evm_27.TU.AmTr_v1.0_scaffold00037.152 0.8548331494415581 88 AMTR_s00115p00062270 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein AtCEST, CEST, evm_27.TU.AmTr_v1.0_scaffold00115.3 0.8544414247195341 89 AMTR_s00025p00151950 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.171 0.8541985419175452 90 AMTR_s00009p00163120 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00009.90 0.8517360039378187 91 AMTR_s00003p00201470 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS17 component RPS17, CS17, PRPS17, evm_27.TU.AmTr_v1.0_scaffold00003.188 0.8499123815230144 94 AMTR_s00149p00031690 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor ATSCO1/CPEF-G, SCO1, ATSCO1, evm_27.TU.AmTr_v1.0_scaffold00149.10 0.8475681199609766 97 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.8473877785671798 99