Sequence Description Alias PCC hrr AMTR_s00070p00019820 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 8 NRPE8B, NRPB8B, NRPD8B, evm_27.TU.AmTr_v1.0_scaffold00070.4 0.8863457788986796 3 AMTR_s00086p00164400 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00086.103 0.8786567003783476 9 AMTR_s00029p00039100 Protein BOLA1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.24 0.8770408429320659 5 AMTR_s00029p00239730 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.860005098006379 11 AMTR_s00066p00158830 evm_27.TU.AmTr_v1.0_scaffold00066.166 0.8561272646574646 24 AMTR_s00002p00248930 evm_27.TU.AmTr_v1.0_scaffold00002.342 0.8489153538502824 10 AMTR_s00067p00130250 Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.112 0.8484688275210598 30 AMTR_s00029p00153350 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component ASK1, ATSKP1, UIP1, SKP1, SKP1A, evm_27.TU.AmTr_v1.0_scaffold00029.181 0.8402713820887776 32 AMTR_s00119p00140470 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SPT3/TAF13 component evm_27.TU.AmTr_v1.0_scaffold00119.118 0.8376985228080864 13 AMTR_s00003p00269280 Cellular respiration.oxidative phosphorylation.ATP synthase complex.membrane MF0 subcomplex.subunit d ATPQ, evm_27.TU.AmTr_v1.0_scaffold00003.405 0.8299215827699523 88 AMTR_s00019p00244000 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase ATSPP, SPP, evm_27.TU.AmTr_v1.0_scaffold00019.366 0.825383992837615 51 AMTR_s00065p00088770 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL26 component evm_27.TU.AmTr_v1.0_scaffold00065.49 0.8240826038856124 54 AMTR_s00048p00151300 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor ERD2B, evm_27.TU.AmTr_v1.0_scaffold00048.103 0.8239774290680709 13 AMTR_s00154p00077880 evm_27.TU.AmTr_v1.0_scaffold00154.51 0.8219101498026002 84 AMTR_s00009p00262730 ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana emb2731, evm_27.TU.AmTr_v1.0_scaffold00009.350 0.8209825853925967 46 AMTR_s00137p00025010 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component SKIP1, evm_27.TU.AmTr_v1.0_scaffold00137.4 0.8201083009258062 55 AMTR_s00106p00092120 Protein translocation.peroxisome.PEX19 insertion system.Pex19 component AtPEX19-2, PEX19-2, evm_27.TU.AmTr_v1.0_scaffold00106.61 0.8081483157479401 24 AMTR_s00095p00044090 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00095.21 0.8077004741336674 19 AMTR_s00009p00134520 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1 phosphatase TOPP4, evm_27.TU.AmTr_v1.0_scaffold00009.77 0.8050852422944157 21 AMTR_s00058p00117500 evm_27.TU.AmTr_v1.0_scaffold00058.77 0.8027206676842806 39 AMTR_s00041p00154550 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component PBG1, evm_27.TU.AmTr_v1.0_scaffold00041.107 0.802325391086173 89 AMTR_s00048p00155020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ATARFB1B, ARFB1B, evm_27.TU.AmTr_v1.0_scaffold00048.110 0.8009190604265924 23 AMTR_s00016p00257030 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA2 component evm_27.TU.AmTr_v1.0_scaffold00016.347 0.8000516606185638 49 AMTR_s00069p00112860 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 NRPB6B, NRPE6B, evm_27.TU.AmTr_v1.0_scaffold00069.76 0.7965879335175972 60 AMTR_s00135p00063440 Protein CutA, chloroplastic OS=Arabidopsis thaliana CUTA, evm_27.TU.AmTr_v1.0_scaffold00135.28 0.7959847775108976 83 AMTR_s00058p00174410 Uncharacterized protein At4g28440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.163 0.7939138805370911 41 AMTR_s00006p00264840 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF10 component TAF10, STG1, TAFII15, evm_27.TU.AmTr_v1.0_scaffold00006.269 0.7932412152248827 30 AMTR_s00085p00083580 evm_27.TU.AmTr_v1.0_scaffold00085.43 0.7924638646729993 33 AMTR_s00007p00012260 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component evm_27.TU.AmTr_v1.0_scaffold00007.1 0.7903966988925097 49 AMTR_s00078p00054560 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.LOLITA component evm_27.TU.AmTr_v1.0_scaffold00078.27 0.7902570239851469 74 AMTR_s00024p00184160 evm_27.TU.AmTr_v1.0_scaffold00024.149 0.7889741367055798 36 AMTR_s00111p00125340 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL19 component evm_27.TU.AmTr_v1.0_scaffold00111.99 0.7888217686487679 37 AMTR_s00007p00269350 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component ATSUG1, RPT6A, evm_27.TU.AmTr_v1.0_scaffold00007.405 0.787739317254078 38 AMTR_s00106p00096810 evm_27.TU.AmTr_v1.0_scaffold00106.65 0.7844722981139917 65 AMTR_s00038p00171980 RNA processing.RNA modification.rRNA/tRNA methylation.TRM11-TRM112 tRNA guanosine-methyltransferase complex.TRM112 component evm_27.TU.AmTr_v1.0_scaffold00038.111 0.7844442817709955 42 AMTR_s00012p00193110 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS24 component evm_27.TU.AmTr_v1.0_scaffold00012.125 0.783264195979154 80 AMTR_s00145p00028530 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.dehydroascorbate reductase (DHAR) DHAR2, evm_27.TU.AmTr_v1.0_scaffold00145.7 0.7793512900085806 99 AMTR_s00012p00103290 Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.56 0.7779886616061932 93 AMTR_s00082p00088490 Cellular respiration.oxidative phosphorylation.ATP synthase complex.membrane MF0 subcomplex.subunit d ATPQ, evm_27.TU.AmTr_v1.0_scaffold00082.12 0.7771959019745176 100 AMTR_s00040p00173990 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer AHP1, evm_27.TU.AmTr_v1.0_scaffold00040.161 0.7763310513485098 59 AMTR_s00059p00174130 Cell cycle.organelle machineries.organelle fission.plastid division.PDV ARC5-recruitment factor PDV2, evm_27.TU.AmTr_v1.0_scaffold00059.173 0.7761969926756002 87 AMTR_s00143p00105790 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM ubiquitin-fold protein evm_27.TU.AmTr_v1.0_scaffold00143.27 0.7756724758104812 61 AMTR_s00007p00036980 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SGF11 component evm_27.TU.AmTr_v1.0_scaffold00007.15 0.7737173527542007 63 AMTR_s00021p00204780 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (HPY2) ATMMS21, HPY2, MMS21, evm_27.TU.AmTr_v1.0_scaffold00021.173 0.7729815148221061 64 AMTR_s00006p00258030 evm_27.TU.AmTr_v1.0_scaffold00006.204 0.7710667720602565 67 AMTR_s00165p00063860 evm_27.TU.AmTr_v1.0_scaffold00165.41 0.7694910795942405 68 AMTR_s00031p00169220 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS25 component evm_27.TU.AmTr_v1.0_scaffold00031.77 0.765808146015772 76 AMTR_s00021p00184700 Glucosidase 2 subunit beta OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.143 0.7636047480036 79 AMTR_s00024p00252130 evm_27.TU.AmTr_v1.0_scaffold00024.348 0.7632921241723846 80 AMTR_s00037p00146990 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein ATG8C, evm_27.TU.AmTr_v1.0_scaffold00037.64 0.7626620136705176 82 AMTR_s00099p00096450 evm_27.TU.AmTr_v1.0_scaffold00099.75 0.7623210098136236 84 AMTR_s00003p00212990 Vesicle trafficking.endomembrane trafficking.trans-Golgi-network (TGN) trafficking.ECHIDNA protein evm_27.TU.AmTr_v1.0_scaffold00003.205 0.7619569321460813 86 AMTR_s00202p00030010 evm_27.TU.AmTr_v1.0_scaffold00202.9 0.7588687746097299 92 AMTR_s00149p00022460 Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana MBD11, ATMBD11, evm_27.TU.AmTr_v1.0_scaffold00149.7 0.7574885710728688 94