Sequence Description Alias PCC hrr AMTR_s00030p00184390 Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.117 0.9006834066636554 1 AMTR_s00109p00132970 Protein modification.phosphorylation.CK kinase superfamily.CKL protein kinase ckl3, evm_27.TU.AmTr_v1.0_scaffold00109.139 0.8772627860586769 4 AMTR_s00154p00032290 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component ATEXO70F1, EXO70F1, evm_27.TU.AmTr_v1.0_scaffold00154.13 0.8757654314254495 3 AMTR_s00033p00206070 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase CRCK3, evm_27.TU.AmTr_v1.0_scaffold00033.177 0.8620703599065886 4 AMTR_s00068p00196240 ECT8, evm_27.TU.AmTr_v1.0_scaffold00068.160 0.8616310226506365 5 AMTR_s00081p00156000 F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00081.66 0.8554532358316336 10 AMTR_s00036p00199540 Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana SNL1, evm_27.TU.AmTr_v1.0_scaffold00036.111 0.8538647623992409 7 AMTR_s00165p00079470 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1 phosphatase TOPP4, evm_27.TU.AmTr_v1.0_scaffold00165.51 0.8484891932273022 14 AMTR_s00095p00059370 RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.TGA transcription factor TGA2, AHBP-1B, evm_27.TU.AmTr_v1.0_scaffold00095.34 0.8440940002429952 28 AMTR_s00140p00087970 RNA biosynthesis.transcriptional activation.NAC transcription factor anac078, NAC2, evm_27.TU.AmTr_v1.0_scaffold00140.39 0.8440923783321463 12 AMTR_s00095p00122180 Protein modification.protein folding and quality control.RAC ribosome-associated chaperone complex.ZRF Hsp40-chaperone component evm_27.TU.AmTr_v1.0_scaffold00095.75 0.8434657719132244 16 AMTR_s00078p00126660 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein ATUBC2, UBC2, evm_27.TU.AmTr_v1.0_scaffold00078.103 0.8428471763862903 20 AMTR_s00109p00055760 evm_27.TU.AmTr_v1.0_scaffold00109.41 0.8424456803328818 26 AMTR_s00001p00271430 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana PFU2, UBC23, evm_27.TU.AmTr_v1.0_scaffold00001.488 0.8400844630917327 39 AMTR_s00040p00135180 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.NETWORK/ELM1 mitochondrial fission factor ELM1, evm_27.TU.AmTr_v1.0_scaffold00040.103 0.8392268212939433 16 AMTR_s00117p00135700 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP72A7, evm_27.TU.AmTr_v1.0_scaffold00117.65 0.8373785475076034 19 AMTR_s00129p00081030 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-5 component PAE2, evm_27.TU.AmTr_v1.0_scaffold00129.58 0.8367081252308487 25 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8354827922530929 35 AMTR_s00071p00019220 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase MAP3KA, MAPKKK3, evm_27.TU.AmTr_v1.0_scaffold00071.8 0.8351319917189219 19 AMTR_s00001p00257110 Protein modification.phosphorylation.IRE bifunctional protein kinase and mRNA endoribonuclease IRE1-2, ATIRE1-2, IRE1A, evm_27.TU.AmTr_v1.0_scaffold00001.347 0.834812976188372 30 AMTR_s00032p00103340 ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.64 0.8347897539586013 21 AMTR_s00175p00047170 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.chorismate synthase EMB1144, evm_27.TU.AmTr_v1.0_scaffold00175.20 0.8323417832865024 22 AMTR_s00111p00076670 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IX kinase families.RLCK-IXb kinase evm_27.TU.AmTr_v1.0_scaffold00111.48 0.8310417518141583 23 AMTR_s00004p00264090 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALIS regulatory component evm_27.TU.AmTr_v1.0_scaffold00004.264 0.83069475219047 24 AMTR_s00038p00173360 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1, evm_27.TU.AmTr_v1.0_scaffold00038.113 0.8267328303236654 35 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor NINJA, evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8261553523263513 50 AMTR_s00057p00105740 evm_27.TU.AmTr_v1.0_scaffold00057.81 0.8250160224227706 53 AMTR_s00095p00133680 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component CUL3B, ATCUL3B, evm_27.TU.AmTr_v1.0_scaffold00095.95 0.8245273682110716 28 AMTR_s00084p00172980 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.FREE1 associated protein evm_27.TU.AmTr_v1.0_scaffold00084.46 0.8244298923015975 39 AMTR_s00022p00216890 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor SLIM1, ATSLIM, AtEIL3, EIL3, evm_27.TU.AmTr_v1.0_scaffold00022.260 0.8208201138707052 30 AMTR_s00023p00191140 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.129 0.8205481217391662 31 AMTR_s00078p00023610 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00078.6 0.8203116849553355 32 AMTR_s00045p00124580 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.122 0.8198909413505484 33 AMTR_s00007p00243380 evm_27.TU.AmTr_v1.0_scaffold00007.258 0.8189574680723118 34 AMTR_s00002p00177010 evm_27.TU.AmTr_v1.0_scaffold00002.151 0.8173802414770364 35 AMTR_s00058p00090300 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY4, evm_27.TU.AmTr_v1.0_scaffold00058.48 0.8173106414795145 36 AMTR_s00029p00239010 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.nPLC-type phospholipase C NPC1, evm_27.TU.AmTr_v1.0_scaffold00029.401 0.8164288224473776 38 AMTR_s00001p00256870 Serine/threonine-protein kinase/endoribonuclease IRE1b OS=Arabidopsis thaliana ATIRE1-1, IRE1-1, evm_27.TU.AmTr_v1.0_scaffold00001.344 0.8127491012570205 39 AMTR_s00019p00254960 Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.437 0.8109127422751257 40 AMTR_s00002p00233990 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.large component (SAE2) SAE2, EMB2764, ATSAE2, evm_27.TU.AmTr_v1.0_scaffold00002.270 0.8101872136093933 71 AMTR_s00029p00219690 evm_27.TU.AmTr_v1.0_scaffold00029.333 0.8072812998200463 42 AMTR_s00025p00208060 RNA processing.RNA modification.pseudouridylation.TruA-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00025.270 0.8063829965532742 57 AMTR_s00005p00141350 MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00005.45 0.8059974989384949 46 AMTR_s00012p00238450 evm_27.TU.AmTr_v1.0_scaffold00012.205 0.8058330407560875 77 AMTR_s00016p00239400 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter ATKT4, KUP3, ATKUP3, evm_27.TU.AmTr_v1.0_scaffold00016.248 0.8054105748820494 48 AMTR_s00062p00161920 Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana ATRBP45A, RBP45A, evm_27.TU.AmTr_v1.0_scaffold00062.151 0.805296264955706 49 AMTR_s00055p00080730 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate synthase evm_27.TU.AmTr_v1.0_scaffold00055.30 0.8051608532710206 50 AMTR_s00017p00249040 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) TAPX, evm_27.TU.AmTr_v1.0_scaffold00017.247 0.8040490544088047 51 AMTR_s00002p00268140 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP9/10/25 transcription factor AtbZIP63, BZO2H3, evm_27.TU.AmTr_v1.0_scaffold00002.534 0.8039654999289543 52 AMTR_s00029p00143630 Protein modification.protein folding and quality control.NAC ribosome-associated chaperone complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00029.167 0.8038893451996028 85 AMTR_s00142p00049490 Nutrient uptake.phosphorus assimilation.phosphate signalling.PHR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00142.28 0.8028898733298285 54 AMTR_s00037p00018100 Protein biosynthesis.translation elongation.hypusination of eEF5.deoxyhypusine hydroxylase evm_27.TU.AmTr_v1.0_scaffold00037.5 0.8027665981655676 60 AMTR_s00038p00234870 evm_27.TU.AmTr_v1.0_scaffold00038.236 0.8022207903047173 64 AMTR_s00056p00151260 Carbohydrate metabolism.sucrose metabolism.degradation.hexokinase ATHXK1, HXK1, GIN2, evm_27.TU.AmTr_v1.0_scaffold00056.128 0.8020617319544993 57 AMTR_s00092p00112020 50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.70 0.8020058202654757 58 AMTR_s00059p00214430 Protein modification.peptide maturation.plastid.PLSP/TPP plastidic signal peptidase TPP, evm_27.TU.AmTr_v1.0_scaffold00059.253 0.8016335746540645 81 AMTR_s00067p00087050 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B2-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00067.64 0.7999749536498894 61 AMTR_s00049p00049960 ABC transporter F family member 4 OS=Arabidopsis thaliana ATGCN4, GCN4, evm_27.TU.AmTr_v1.0_scaffold00049.22 0.7978172421296107 62 AMTR_s00057p00190070 evm_27.TU.AmTr_v1.0_scaffold00057.207 0.7976381296454086 63 AMTR_s00111p00096770 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type) CAT9, evm_27.TU.AmTr_v1.0_scaffold00111.69 0.797214806324684 64 AMTR_s00045p00232830 SPX domain-containing protein 4 OS=Arabidopsis thaliana ATSPX4, SPX4, evm_27.TU.AmTr_v1.0_scaffold00045.342 0.7971906979161453 65 AMTR_s00018p00087700 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec12-type guanyl-nucleotide exchange factor (GEF) evm_27.TU.AmTr_v1.0_scaffold00018.39 0.7971375189555873 66 AMTR_s00009p00207050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00009.134 0.7970788958482146 71 AMTR_s00078p00168800 Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00078.159 0.7948418778304569 70 AMTR_s00025p00114450 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana ATBPM2, BPM2, evm_27.TU.AmTr_v1.0_scaffold00025.103 0.7943620654464093 71 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.7911225700304072 74 AMTR_s00007p00156990 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00007.118 0.7904849407946517 75 AMTR_s00039p00186000 WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.149 0.7899438604656293 76 AMTR_s00053p00044540 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00053.22 0.7877661099143016 78 AMTR_s00004p00061310 evm_27.TU.AmTr_v1.0_scaffold00004.43 0.7874596596136001 79 AMTR_s00017p00243480 evm_27.TU.AmTr_v1.0_scaffold00017.221 0.7864731469447153 80 AMTR_s00025p00116370 evm_27.TU.AmTr_v1.0_scaffold00025.106 0.7864312767448933 81 AMTR_s00133p00048100 evm_27.TU.AmTr_v1.0_scaffold00133.13 0.7851761879607888 87 AMTR_s00012p00210330 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) PRT6, evm_27.TU.AmTr_v1.0_scaffold00012.148 0.7850300113893631 85 AMTR_s00010p00198480 Peroxidase N1 OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold00010.185 0.7849888942892713 86 AMTR_s00025p00055630 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component evm_27.TU.AmTr_v1.0_scaffold00025.32 0.7806580482334211 89 AMTR_s00156p00048240 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase MAPKKK8, ARAKIN, ATMEKK1, MEKK1, evm_27.TU.AmTr_v1.0_scaffold00156.23 0.7791899665316183 91 AMTR_s00065p00071220 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component evm_27.TU.AmTr_v1.0_scaffold00065.37 0.7762026798952579 96 AMTR_s01428p00008710 Malate dehydrogenase OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold01428.1 0.7758950297012628 98 AMTR_s00090p00042810 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase IBR5, DSPTP1E, evm_27.TU.AmTr_v1.0_scaffold00090.9 0.7753967487202311 99 AMTR_s00006p00267910 Protein modification.phosphorylation.TKL kinase superfamily.URK kinase families.URK-2 kinase evm_27.TU.AmTr_v1.0_scaffold00006.307 0.7752365370738475 100