Sequence Description Alias PCC hrr AMTR_s00110p00064100 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOB1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00110.28 0.9360693659158086 1 AMTR_s00019p00240430 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC9 component OSB3, evm_27.TU.AmTr_v1.0_scaffold00019.351 0.9283636990976378 2 AMTR_s00071p00070350 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase ATKRS-1, evm_27.TU.AmTr_v1.0_scaffold00071.41 0.9204593249278007 22 AMTR_s00110p00121530 Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.96 0.9195315112710514 4 AMTR_s00061p00067260 High mobility group B protein 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.42 0.9190262845242484 12 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component TOM40, evm_27.TU.AmTr_v1.0_scaffold00119.97 0.9183591606235085 6 AMTR_s00067p00095130 evm_27.TU.AmTr_v1.0_scaffold00067.73 0.9128702274540187 7 AMTR_s00068p00130970 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A, evm_27.TU.AmTr_v1.0_scaffold00068.89 0.9073161271839054 47 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase ATPRMT11, ATPRMT1B, PRMT11, PRMT1B, evm_27.TU.AmTr_v1.0_scaffold00036.188 0.9060090352981734 19 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase CDKD1;1, CAK3AT, AT;CDKD;1, evm_27.TU.AmTr_v1.0_scaffold00057.19 0.9058301849742693 27 AMTR_s00109p00071210 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component evm_27.TU.AmTr_v1.0_scaffold00109.55 0.9038586367414878 94 AMTR_s00066p00115140 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00066.107 0.9025335641333586 13 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.9005992512411247 49 AMTR_s00006p00250940 O-fucosyltransferase 27 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.152 0.8993795499167317 56 AMTR_s00078p00100600 Solute transport.porins.VDAC voltage-gated anion channel ATVDAC1, VDAC1, evm_27.TU.AmTr_v1.0_scaffold00078.71 0.8961538851350777 35 AMTR_s00001p00273100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP40, SQN, evm_27.TU.AmTr_v1.0_scaffold00001.594 0.8958728565882489 18 AMTR_s00088p00153240 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00088.123 0.894100815100923 52 AMTR_s00114p00123360 evm_27.TU.AmTr_v1.0_scaffold00114.56 0.8919919587196511 37 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.8918667060311257 44 AMTR_s00030p00176130 Transcription factor LHW OS=Arabidopsis thaliana LHW, evm_27.TU.AmTr_v1.0_scaffold00030.109 0.8903900161775493 22 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.8903843114555384 53 AMTR_s00016p00227740 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.RMI1 non-catalytic component ATRMI1, BLAP75, RMI1, evm_27.TU.AmTr_v1.0_scaffold00016.214 0.8874861707422677 25 AMTR_s00051p00218610 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.PTEN lipid phosphatase PEN2, ATPEN2, evm_27.TU.AmTr_v1.0_scaffold00051.97 0.8866489411573748 26 AMTR_s00101p00087960 Nucleotide metabolism.purines.phosphotransfers.guanylate kinase evm_27.TU.AmTr_v1.0_scaffold00101.64 0.8855072387855069 48 AMTR_s00032p00058660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00032.37 0.885033833364543 30 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor EMB2271, evm_27.TU.AmTr_v1.0_scaffold00155.51 0.8838008167424664 29 AMTR_s00048p00053570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor TOZ, evm_27.TU.AmTr_v1.0_scaffold00048.18 0.8835870873906593 30 AMTR_s00029p00201060 Solute transport.carrier-mediated transport.MC-type solute transporter ATPUMP1, UCP, UCP1, PUMP1, ATUCP1, evm_27.TU.AmTr_v1.0_scaffold00029.282 0.8804456513395315 96 AMTR_s00029p00106010 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.107 0.8787218388277592 34 AMTR_s00009p00218530 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS9 component evm_27.TU.AmTr_v1.0_scaffold00009.156 0.8777048954641886 34 AMTR_s00029p00242040 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component DDB2, evm_27.TU.AmTr_v1.0_scaffold00029.419 0.8756596817175248 35 AMTR_s00006p00266620 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.pre-40S subunit nuclear export.Ltv1 export factor evm_27.TU.AmTr_v1.0_scaffold00006.291 0.8752860018897941 37 AMTR_s00003p00268960 Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana LGT4, GAUT10, evm_27.TU.AmTr_v1.0_scaffold00003.402 0.8751813181174195 38 AMTR_s00025p00100140 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.84 0.8746751756225523 56 AMTR_s00056p00059990 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.PWP2/UTP1 assembly factor PWP2, ATPWP2, evm_27.TU.AmTr_v1.0_scaffold00056.40 0.874397176463986 42 AMTR_s00045p00223730 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein ATKINESIN-13A, KINESIN-13A, evm_27.TU.AmTr_v1.0_scaffold00045.315 0.8739816398485944 66 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor IMP4, evm_27.TU.AmTr_v1.0_scaffold00101.112 0.8734819216298247 97 AMTR_s00059p00183080 Chromatin organisation.histone chaperone activities.NASP-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00059.197 0.873117553643554 47 AMTR_s00017p00083690 Peter Pan-like protein OS=Arabidopsis thaliana PPAN, evm_27.TU.AmTr_v1.0_scaffold00017.31 0.8724139984962899 49 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit HAP13, evm_27.TU.AmTr_v1.0_scaffold00014.130 0.8720068397142388 89 AMTR_s00002p00183560 evm_27.TU.AmTr_v1.0_scaffold00002.161 0.869739690337447 55 AMTR_s00099p00054090 evm_27.TU.AmTr_v1.0_scaffold00099.37 0.8686775623136396 68 AMTR_s00057p00214920 evm_27.TU.AmTr_v1.0_scaffold00057.271 0.8680488972324368 59 AMTR_s00049p00071550 Cell division control protein 48 homolog C OS=Arabidopsis thaliana emb1354, CDC48C, evm_27.TU.AmTr_v1.0_scaffold00049.44 0.8668174731378948 78 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana PHB1, ATPHB1, evm_27.TU.AmTr_v1.0_scaffold00058.65 0.8664725046901586 63 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.8655960018449745 67 AMTR_s00032p00197250 Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.178 0.8649651009192045 68 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor APUM23, PUM23, evm_27.TU.AmTr_v1.0_scaffold00129.17 0.8649209834895633 69 AMTR_s00022p00221050 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO2 export karyopherin evm_27.TU.AmTr_v1.0_scaffold00022.277 0.8622763959449096 71 AMTR_s00089p00047210 evm_27.TU.AmTr_v1.0_scaffold00089.14 0.8617847429765737 72 AMTR_s00058p00122560 Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.84 0.8616515640194248 74 AMTR_s00109p00118420 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG1/NSN1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00109.117 0.8611381857939197 75 AMTR_s00039p00135490 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP1/TAC3 component PTAC3, evm_27.TU.AmTr_v1.0_scaffold00039.93 0.8610643239427533 100 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8605690208377379 81 AMTR_s00019p00154740 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00019.144 0.8594527898463575 82 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.8593483257301324 83 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.859259536510519 84 AMTR_s00089p00044750 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin HOS1, evm_27.TU.AmTr_v1.0_scaffold00089.13 0.8588613415377191 85 AMTR_s00058p00175640 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta ERA1, ATFTB, WIG, evm_27.TU.AmTr_v1.0_scaffold00058.165 0.8580002468145159 98 AMTR_s00029p00146380 evm_27.TU.AmTr_v1.0_scaffold00029.171 0.8579399888642356 91 AMTR_s00044p00129280 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease EMB2763, evm_27.TU.AmTr_v1.0_scaffold00044.117 0.8574004834196777 93 AMTR_s00010p00245570 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component evm_27.TU.AmTr_v1.0_scaffold00010.328 0.8569185903360224 98 AMTR_s00003p00268400 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component EIF3B-2, ATEIF3B-2, EIF3B, evm_27.TU.AmTr_v1.0_scaffold00003.398 0.8569054430934998 95 AMTR_s00007p00085450 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00007.50 0.8561352807683137 99