Sequence Description Alias PCC hrr AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.9299373249341806 1 AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB44, SAUL1, ATPUB44, evm_27.TU.AmTr_v1.0_scaffold00044.147 0.9190065411592226 2 AMTR_s00071p00180880 MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.184 0.884659369388597 3 AMTR_s00072p00181720 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein ATHSP70, HSP70 0.8829406356871219 4 AMTR_s00010p00175790 evm_27.TU.AmTr_v1.0_scaffold00010.142 0.8767749867961648 5 AMTR_s00099p00127980 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.112 0.8734933602141629 6 AMTR_s00019p00227240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REIL maturation factor FZF, evm_27.TU.AmTr_v1.0_scaffold00019.294 0.8710287933572909 10 AMTR_s00061p00182310 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.6-phosphogluconate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00061.203 0.8567899929849445 32 AMTR_s00002p00269930 Nutrient uptake.sulfur assimilation.sulfate assimilation.ATP sulfurylase APS1, evm_27.TU.AmTr_v1.0_scaffold00002.565 0.8554104406712598 9 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.8549492930922217 10 AMTR_s00002p00167510 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase evm_27.TU.AmTr_v1.0_scaffold00002.141 0.8537960419871916 11 AMTR_s00041p00189930 Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.162 0.8529489134076677 12 AMTR_s00030p00127540 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71B2, evm_27.TU.AmTr_v1.0_scaffold00030.76 0.8519881771962613 13 AMTR_s00039p00057090 evm_27.TU.AmTr_v1.0_scaffold00039.22 0.844315999817779 14 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor EIL1, AtEIL1, evm_27.TU.AmTr_v1.0_scaffold00119.91 0.8420224234705522 25 AMTR_s00045p00124580 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.122 0.8410991702029893 16 AMTR_s00079p00195720 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group PR5K, evm_27.TU.AmTr_v1.0_scaffold00079.129 0.8395942280173407 17 AMTR_s00085p00156760 Protein modification.phosphorylation.TKL kinase superfamily.DUF26 kinase CRK42, evm_27.TU.AmTr_v1.0_scaffold00085.96 0.8389639976629271 18 AMTR_s00059p00202900 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP82C2, evm_27.TU.AmTr_v1.0_scaffold00059.227 0.8334772882650295 52 AMTR_s00181p00038960 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71B37, evm_27.TU.AmTr_v1.0_scaffold00181.21 0.8333973090297936 20 AMTR_s00030p00045700 Cytoskeleton.microfilament network.actin filament protein ACT7, evm_27.TU.AmTr_v1.0_scaffold00030.17 0.8311296010121902 21 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8290928943569069 43 AMTR_s00057p00208300 evm_27.TU.AmTr_v1.0_scaffold00057.251 0.8275895491339448 23 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor NINJA, evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8275781325516977 47 AMTR_s00008p00210700 Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional GTP cyclohydrolase II (RibA) and DHBP synthase (RibB) GCH, ATGCH, RFD1, ATRIBA1, evm_27.TU.AmTr_v1.0_scaffold00008.133 0.8236450260554307 25 AMTR_s00078p00191480 Multiprotein-bridging factor 1c OS=Arabidopsis thaliana MBF1C, ATMBF1C, evm_27.TU.AmTr_v1.0_scaffold00078.199 0.8217941184883913 26 AMTR_s00029p00158730 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component evm_27.TU.AmTr_v1.0_scaffold00029.188 0.821138813113882 54 AMTR_s00004p00045050 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.28 0.817779695935528 34 AMTR_s00048p00218130 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT73B1, evm_27.TU.AmTr_v1.0_scaffold00048.199 0.8160205561144624 29 AMTR_s00056p00117010 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter PEN3, ABCG36, ATPDR8, ATABCG36, PDR8, evm_27.TU.AmTr_v1.0_scaffold00056.84 0.8142785325953134 30 AMTR_s00019p00244830 AAA-ATPase At3g50940 OS=Arabidopsis thaliana AATP1, evm_27.TU.AmTr_v1.0_scaffold00019.374 0.8137082329701698 33 AMTR_s00022p00096580 evm_27.TU.AmTr_v1.0_scaffold00022.77 0.813195013550589 32 AMTR_s00025p00232020 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade F phosphatase evm_27.TU.AmTr_v1.0_scaffold00025.340 0.8129425609916818 33 AMTR_s00044p00148270 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (ANT-type) evm_27.TU.AmTr_v1.0_scaffold00044.151 0.8128892786559359 34 AMTR_s00148p00081780 Protein modification.lipidation.N-terminal myristoylation.N-myristoyltransferase ATNMT1, NMT1, evm_27.TU.AmTr_v1.0_scaffold00148.54 0.8092221919782168 35 AMTR_s00061p00071760 evm_27.TU.AmTr_v1.0_scaffold00061.47 0.808313082517169 36 AMTR_s00059p00094000 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.ARP AP-endonuclease ARP, evm_27.TU.AmTr_v1.0_scaffold00059.68 0.8057284449563141 44 AMTR_s00032p00159210 Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL) PAL4, evm_27.TU.AmTr_v1.0_scaffold00032.129 0.8057191387134809 58 AMTR_s00002p00135750 evm_27.TU.AmTr_v1.0_scaffold00002.99 0.8033119048348109 39 AMTR_s00133p00048100 evm_27.TU.AmTr_v1.0_scaffold00133.13 0.8006378710283525 63 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase ATMKP1, MKP1, evm_27.TU.AmTr_v1.0_scaffold00174.16 0.8002985238892115 54 AMTR_s00065p00171490 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Fip1 component FIP1[V], ATFIP1[V], FIPS5, ATFIPS5, evm_27.TU.AmTr_v1.0_scaffold00065.140 0.8002790119124136 47 AMTR_s00008p00262380 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase DHS2, evm_27.TU.AmTr_v1.0_scaffold00008.219 0.8001786930335357 43 AMTR_s00012p00264420 Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.360 0.7998633283444465 44 AMTR_s00009p00250650 Coenzyme metabolism.FMN/FAD biosynthesis.pyrimidine phosphatase (PyrP) evm_27.TU.AmTr_v1.0_scaffold00009.255 0.7976953810208456 50 AMTR_s00059p00122840 Solute transport.carrier-mediated transport.MFS superfamily.SP family.polyol/monosaccharide transporter (PLT-type) ATPMT5, ATPLT5, PMT5, evm_27.TU.AmTr_v1.0_scaffold00059.96 0.7971647160270133 91 AMTR_s00727p00010990 Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum HCT, evm_27.TU.AmTr_v1.0_scaffold00727.2 0.7970617534193738 48 AMTR_s00048p00164020 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00048.117 0.7955078486673307 59 AMTR_s00009p00164690 Protein biosynthesis.translation initiation.mRNA loading.eIF-iso4F unwinding complex.eIF-iso4G component eIFiso4G1, evm_27.TU.AmTr_v1.0_scaffold00009.93 0.7926324157688623 50 AMTR_s00019p00245530 HAT9, evm_27.TU.AmTr_v1.0_scaffold00019.380 0.7915895117589405 56 AMTR_s00002p00211460 RNA biosynthesis.transcriptional activation.PLATZ transcription factor evm_27.TU.AmTr_v1.0_scaffold00002.219 0.7906994663296543 89 AMTR_s00197p00041400 Phytohormones.gibberellin.perception and signal transduction.GID1-type receptor ATGID1C, GID1C, evm_27.TU.AmTr_v1.0_scaffold00197.22 0.7905796822388855 91 AMTR_s00003p00222410 Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00003.212 0.7904138384756912 73 AMTR_s00043p00215340 U-box domain-containing protein 8 OS=Arabidopsis thaliana PUB8, B80, evm_27.TU.AmTr_v1.0_scaffold00043.79 0.7894163812126581 63 AMTR_s00137p00027820 Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum HCT, evm_27.TU.AmTr_v1.0_scaffold00137.5 0.7885637426942966 57 AMTR_s00004p00146770 Probable carboxylesterase 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.145 0.7877752876014034 60 AMTR_s00120p00076230 Protein modification.phosphorylation.TKL kinase superfamily.LRR-III kinase TMKL1, evm_27.TU.AmTr_v1.0_scaffold00120.33 0.7877736855292621 59 AMTR_s00006p00234620 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00006.103 0.787324277416036 86 AMTR_s00041p00168770 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.122 0.7858594118395055 62 AMTR_s00057p00145210 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.nematode elicitor response.NILR receptor kinase evm_27.TU.AmTr_v1.0_scaffold00057.129 0.7837774884083464 63 AMTR_s00058p00090300 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY4, evm_27.TU.AmTr_v1.0_scaffold00058.48 0.7836099089067475 64 AMTR_s00066p00158280 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase evm_27.TU.AmTr_v1.0_scaffold00066.164 0.7834249352475716 65 AMTR_s00319p00013650 Polygalacturonase QRT3 OS=Arabidopsis thaliana QRT3, evm_27.TU.AmTr_v1.0_scaffold00319.2 0.7820605797824802 68 AMTR_s00132p00118400 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor HSF4, HSFB1, AT-HSFB1, ATHSF4, evm_27.TU.AmTr_v1.0_scaffold00132.31 0.78199350620382 69 AMTR_s00068p00075130 5-adenylylsulfate reductase-like 7 OS=Arabidopsis thaliana ATAPRL7, APRL7, evm_27.TU.AmTr_v1.0_scaffold00068.32 0.7816383099393998 79 AMTR_s00006p00225600 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor MYBR1, MYB44, ATMYB44, ATMYBR1, evm_27.TU.AmTr_v1.0_scaffold00006.100 0.7814094981180132 71 AMTR_s00059p00106830 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor IDD2, AtIDD2, evm_27.TU.AmTr_v1.0_scaffold00059.81 0.7806511228485106 72 AMTR_s00142p00049490 Nutrient uptake.phosphorus assimilation.phosphate signalling.PHR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00142.28 0.7777668260264786 91 AMTR_s00034p00071480 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana ITN1, evm_27.TU.AmTr_v1.0_scaffold00034.17 0.7775229300805444 79 AMTR_s00036p00168840 Multi-process regulation.circadian clock.evening element regulation.Evening complex (EC).ELF3 component ELF3, PYK20, evm_27.TU.AmTr_v1.0_scaffold00036.83 0.7751220389978236 80 AMTR_s00019p00230710 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.ADO-type photoreceptor LKP1, ADO1, ZTL, FKL2, evm_27.TU.AmTr_v1.0_scaffold00019.314 0.7741925107206371 81 AMTR_s00010p00019880 Probable carboxylesterase 17 OS=Arabidopsis thaliana CXE17, AtCXE17, evm_27.TU.AmTr_v1.0_scaffold00010.6 0.772716055719183 84 AMTR_s00040p00148670 Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.120 0.7718123329608879 87 AMTR_s00078p00087780 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VII kinase families.RLCK-VIIa kinase evm_27.TU.AmTr_v1.0_scaffold00078.59 0.7710403983278006 90 AMTR_s00002p00246420 evm_27.TU.AmTr_v1.0_scaffold00002.331 0.7709493337921208 91 AMTR_s00025p00055630 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component evm_27.TU.AmTr_v1.0_scaffold00025.32 0.7707935862097486 92 AMTR_s00041p00232150 Probable alkaline/neutral invertase B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.275 0.7704873644383612 93 AMTR_s00095p00177830 evm_27.TU.AmTr_v1.0_scaffold00095.156 0.7699461684045866 94 AMTR_s00033p00228810 evm_27.TU.AmTr_v1.0_scaffold00033.219 0.7688395986090772 96 AMTR_s00142p00054380 RNA processing.RNA quality control Exon Junction complex (EJC).core components.CASC3 component evm_27.TU.AmTr_v1.0_scaffold00142.31 0.7687877451436849 97 AMTR_s00078p00023610 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00078.6 0.7686692321424138 98 AMTR_s00055p00107870 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT1 protease SLP2, evm_27.TU.AmTr_v1.0_scaffold00055.38 0.7683127627907902 99 AMTR_s00016p00239760 evm_27.TU.AmTr_v1.0_scaffold00016.250 0.7680776943439114 100