Sequence Description Alias PCC hrr AMTR_s00068p00034280 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 5 NRPD5, ATRPABC24.3, NRPB5, RPB5A, evm_27.TU.AmTr_v1.0_scaffold00068.11 0.9285124721965178 1 AMTR_s00019p00193260 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ATARL1, ARF3, ARL1, evm_27.TU.AmTr_v1.0_scaffold00019.217 0.9027035717630199 2 AMTR_s00002p00272080 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component PRCGB, PBD1, evm_27.TU.AmTr_v1.0_scaffold00002.660 0.8998254732519595 16 AMTR_s00049p00186630 Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH5-type component SDH5, evm_27.TU.AmTr_v1.0_scaffold00049.188 0.8909411900135908 4 AMTR_s00072p00050030 E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.18 0.890055790706999 5 AMTR_s00057p00124520 NPL4-like protein 1 OS=Arabidopsis thaliana NPL41, evm_27.TU.AmTr_v1.0_scaffold00057.103 0.88500358113143 6 AMTR_s00086p00180250 evm_27.TU.AmTr_v1.0_scaffold00086.118 0.8826040067953508 7 AMTR_s00022p00215490 evm_27.TU.AmTr_v1.0_scaffold00022.257 0.8824670046406627 8 AMTR_s00096p00110370 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ATARFA1B, ARFA1B 0.8798404671691077 16 AMTR_s00013p00211990 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL17 component evm_27.TU.AmTr_v1.0_scaffold00013.147 0.8778556496949299 10 AMTR_s00003p00234980 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component evm_27.TU.AmTr_v1.0_scaffold00003.236 0.8738818326888781 40 AMTR_s00067p00044400 evm_27.TU.AmTr_v1.0_scaffold00067.24 0.8732750795979272 16 AMTR_s00039p00044370 Cell cycle.organelle machineries.DNA replication.single-stranded DNA (ssDNA) maintenance.SSB-type ssDNA-binding protein evm_27.TU.AmTr_v1.0_scaffold00039.15 0.8711006363207981 13 AMTR_s00089p00040540 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13a component evm_27.TU.AmTr_v1.0_scaffold00089.11 0.8651164848715385 44 AMTR_s00053p00036280 evm_27.TU.AmTr_v1.0_scaffold00053.15 0.8588539094758442 15 AMTR_s00129p00094040 evm_27.TU.AmTr_v1.0_scaffold00129.66 0.8553904340303276 20 AMTR_s00009p00178470 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF electron transfer flavoprotein complex.beta subunit ETFBETA, evm_27.TU.AmTr_v1.0_scaffold00009.108 0.8551501707721978 43 AMTR_s00017p00094950 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27a component UBQ6, evm_27.TU.AmTr_v1.0_scaffold00017.35 0.8550714223522228 73 AMTR_s00003p00269280 Cellular respiration.oxidative phosphorylation.ATP synthase complex.membrane MF0 subcomplex.subunit d ATPQ, evm_27.TU.AmTr_v1.0_scaffold00003.405 0.855016953380847 45 AMTR_s00077p00123980 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component evm_27.TU.AmTr_v1.0_scaffold00077.117 0.8538598641190409 66 AMTR_s00017p00128950 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase ATCPK4, CPK4, evm_27.TU.AmTr_v1.0_scaffold00017.52 0.8524269039455729 21 AMTR_s00075p00134690 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00075.39 0.8522215455859016 22 AMTR_s00121p00130180 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component HAP1, MEE63, MAGO, evm_27.TU.AmTr_v1.0_scaffold00121.38 0.8505784044134507 30 AMTR_s00032p00231660 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4E component EIF4E, CUM1, AT.EIF4E1, eIF4E1, evm_27.TU.AmTr_v1.0_scaffold00032.256 0.8505351912741789 24 AMTR_s00070p00186600 evm_27.TU.AmTr_v1.0_scaffold00070.119 0.8484975612767645 25 AMTR_s00006p00238670 evm_27.TU.AmTr_v1.0_scaffold00006.113 0.8479524728251104 26 AMTR_s00010p00267420 Protein modification.protein folding and quality control.protein folding catalyst activities.Parvulin peptidyl-prolyl isomerase evm_27.TU.AmTr_v1.0_scaffold00010.536 0.8462163956745088 27 AMTR_s00061p00206400 TFIIS, evm_27.TU.AmTr_v1.0_scaffold00061.254 0.8449354184118608 47 AMTR_s00117p00068520 evm_27.TU.AmTr_v1.0_scaffold00117.18 0.8421284622550889 29 AMTR_s00102p00065210 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.assembly.COX16 component evm_27.TU.AmTr_v1.0_scaffold00102.31 0.8397949104847507 31 AMTR_s00008p00026380 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase AtRABA4a, RABA4a, evm_27.TU.AmTr_v1.0_scaffold00008.8 0.835323250251444 32 AMTR_s00053p00140290 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.acyl carrier protein (mtACP) mtACP2, evm_27.TU.AmTr_v1.0_scaffold00053.88 0.834620572707242 58 AMTR_s00077p00057670 evm_27.TU.AmTr_v1.0_scaffold00077.36 0.8343789091313013 34 AMTR_s00097p00149320 Cell cycle.organelle machineries.organelle fission.plastid division.PDV ARC5-recruitment factor PDV1, evm_27.TU.AmTr_v1.0_scaffold00097.47 0.83167166847237 35 AMTR_s00015p00258610 evm_27.TU.AmTr_v1.0_scaffold00015.121 0.8316170074299313 36 AMTR_s00150p00045150 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein atgos11, GOS11, evm_27.TU.AmTr_v1.0_scaffold00150.12 0.8295778834038828 37 AMTR_s00058p00204160 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component evm_27.TU.AmTr_v1.0_scaffold00058.212 0.8286757367788589 44 AMTR_s00099p00021760 evm_27.TU.AmTr_v1.0_scaffold00099.8 0.8286389827248072 39 AMTR_s00125p00104110 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp40 Hsp70-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00125.25 0.828272995333104 90 AMTR_s00048p00062300 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL9 component evm_27.TU.AmTr_v1.0_scaffold00048.24 0.8281418945753054 41 AMTR_s00154p00077880 evm_27.TU.AmTr_v1.0_scaffold00154.51 0.8274566463818801 71 AMTR_s00056p00205810 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component evm_27.TU.AmTr_v1.0_scaffold00056.196 0.825847403847599 76 AMTR_s00088p00173270 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-WNK kinase evm_27.TU.AmTr_v1.0_scaffold00088.148 0.8254274328322531 66 AMTR_s00133p00113640 evm_27.TU.AmTr_v1.0_scaffold00133.58 0.8250415784810875 47 AMTR_s00142p00098170 DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA repair protein (XRCC1) ATXRCC1, evm_27.TU.AmTr_v1.0_scaffold00142.64 0.824679205623869 49 AMTR_s00066p00019590 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD6 component PFD6, evm_27.TU.AmTr_v1.0_scaffold00066.2 0.8223885592812871 51 AMTR_s00099p00087020 evm_27.TU.AmTr_v1.0_scaffold00099.65 0.82182170612099 52 AMTR_s00016p00207540 Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.MUB ubiquitin-fold protein ATGP4, evm_27.TU.AmTr_v1.0_scaffold00016.176 0.8195937845540661 55 AMTR_s00010p00247540 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL7/L12 component evm_27.TU.AmTr_v1.0_scaffold00010.338 0.8191272565870652 56 AMTR_s00004p00055230 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group CYTACS1, OLD3, OASA1, ATCYS-3A, evm_27.TU.AmTr_v1.0_scaffold00004.37 0.817848849438126 61 AMTR_s00171p00017320 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN3 component CSN3, FUS11, COP13, evm_27.TU.AmTr_v1.0_scaffold00171.3 0.8159100589821917 100 AMTR_s00023p00175470 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.catalytic core subcomplex.APC10 component APC10, evm_27.TU.AmTr_v1.0_scaffold00023.109 0.8152870388150255 74 AMTR_s00007p00074210 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein ATSYP61, OSM1, SYP61, evm_27.TU.AmTr_v1.0_scaffold00007.40 0.8147936194004158 62 AMTR_s00001p00251650 UPF0496 protein 4 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00001.320 0.8134592691209981 64 AMTR_s00029p00153350 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component ASK1, ATSKP1, UIP1, SKP1, SKP1A, evm_27.TU.AmTr_v1.0_scaffold00029.181 0.8108471570518433 73 AMTR_s00048p00081140 evm_27.TU.AmTr_v1.0_scaffold00048.38 0.8088085762488354 73 AMTR_s00029p00198320 Protein modification.acetylation.NatE-type N-terminal acetylase evm_27.TU.AmTr_v1.0_scaffold00029.273 0.8084674446726743 96 AMTR_s00010p00220140 F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.233 0.8081850829287682 75 AMTR_s00016p00256100 Protein modification.phosphorylation.CMGC kinase superfamily.CK-II kinase.regulatory beta subunit CKB1, evm_27.TU.AmTr_v1.0_scaffold00016.340 0.8076735919688721 76 AMTR_s00159p00078560 evm_27.TU.AmTr_v1.0_scaffold00159.30 0.8074025998725626 77 AMTR_s00122p00015610 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component PDF2, evm_27.TU.AmTr_v1.0_scaffold00122.4 0.8061067275779586 81 AMTR_s00022p00238840 evm_27.TU.AmTr_v1.0_scaffold00022.336 0.805894812335652 82 AMTR_s00069p00163470 Protein translocation.endoplasmic reticulum.GET post-translational insertion system.GET3 component evm_27.TU.AmTr_v1.0_scaffold00069.136 0.8056257741108883 100 AMTR_s00021p00184700 Glucosidase 2 subunit beta OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.143 0.804518421828031 85 AMTR_s00038p00146240 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein UBC5, evm_27.TU.AmTr_v1.0_scaffold00038.89 0.803661481266027 87 AMTR_s00030p00067450 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.ISY1/MAC8 component evm_27.TU.AmTr_v1.0_scaffold00030.31 0.8034811832099115 89 AMTR_s00034p00044200 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL35 component evm_27.TU.AmTr_v1.0_scaffold00034.5 0.803473170697392 90 AMTR_s00070p00192400 Amino acid metabolism.biosynthesis.serine family.glycine.serine hydroxymethyltransferase SHM7, evm_27.TU.AmTr_v1.0_scaffold00070.125 0.8017564857492131 91 AMTR_s00017p00252560 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP7 group protein ATSYP71, SYP71, evm_27.TU.AmTr_v1.0_scaffold00017.259 0.8013105343173647 92 AMTR_s00004p00172570 DnaJ protein homolog 2 OS=Allium porrum ATJ3, ATJ, evm_27.TU.AmTr_v1.0_scaffold00004.197 0.7999968131679407 97 AMTR_s00048p00110490 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.CIA2/AE7 component AE7, evm_27.TU.AmTr_v1.0_scaffold00048.56 0.7999366788762542 98 AMTR_s00056p00076060 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond evm_27.TU.AmTr_v1.0_scaffold00056.55 0.7995701441494408 100