Sequence Description Alias PCC hrr AMTR_s00009p00261830 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) ATMP2, ATMAPR3, MAPR3, MSBP2, evm_27.TU.AmTr_v1.0_scaffold00009.339 0.8988342577170714 1 AMTR_s00081p00156000 F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00081.66 0.8962794459284806 2 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.892825417172863 3 AMTR_s00069p00158470 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component evm_27.TU.AmTr_v1.0_scaffold00069.131 0.8843457502894426 5 AMTR_s00009p00207050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00009.134 0.8763868806322931 5 AMTR_s00135p00112690 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00135.65 0.8730073020319391 6 AMTR_s00071p00157830 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor cICDH, evm_27.TU.AmTr_v1.0_scaffold00071.147 0.8684330057031885 7 AMTR_s00040p00135180 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.NETWORK/ELM1 mitochondrial fission factor ELM1, evm_27.TU.AmTr_v1.0_scaffold00040.103 0.8668234508639349 8 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8626203455348266 17 AMTR_s00018p00087700 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec12-type guanyl-nucleotide exchange factor (GEF) evm_27.TU.AmTr_v1.0_scaffold00018.39 0.8565773119237204 10 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.8562203934642472 11 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH7, evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8559561814969302 12 AMTR_s00030p00184390 Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.117 0.8546593198520723 13 AMTR_s00025p00054190 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.MBD7 ROS1-recruitment complex.IDM2/IDM3 component evm_27.TU.AmTr_v1.0_scaffold00025.30 0.8542232463466009 14 AMTR_s00045p00124580 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.122 0.8542162086630758 15 AMTR_s00142p00049490 Nutrient uptake.phosphorus assimilation.phosphate signalling.PHR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00142.28 0.8515332616921502 16 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.848838308642126 19 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8468040271590508 35 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8457851151304028 51 AMTR_s00033p00175020 Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.124 0.8443617823772503 20 AMTR_s00165p00079470 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1 phosphatase TOPP4, evm_27.TU.AmTr_v1.0_scaffold00165.51 0.8441805761614414 21 AMTR_s00059p00094000 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.ARP AP-endonuclease ARP, evm_27.TU.AmTr_v1.0_scaffold00059.68 0.8440855458605754 22 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase ATMKP1, MKP1, evm_27.TU.AmTr_v1.0_scaffold00174.16 0.8434543596151262 23 AMTR_s00010p00255510 evm_27.TU.AmTr_v1.0_scaffold00010.386 0.8434159888348325 24 AMTR_s00110p00098100 evm_27.TU.AmTr_v1.0_scaffold00110.59 0.8430553399814986 25 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8405490504535252 46 AMTR_s00046p00170580 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein SMG7, evm_27.TU.AmTr_v1.0_scaffold00046.93 0.8391161588956572 42 AMTR_s00057p00190070 evm_27.TU.AmTr_v1.0_scaffold00057.207 0.8377029851052207 28 AMTR_s00025p00055630 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component evm_27.TU.AmTr_v1.0_scaffold00025.32 0.8353190315761232 29 AMTR_s00038p00173360 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1, evm_27.TU.AmTr_v1.0_scaffold00038.113 0.8343116329638215 30 AMTR_s00129p00081030 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-5 component PAE2, evm_27.TU.AmTr_v1.0_scaffold00129.58 0.8341672161248658 31 AMTR_s00030p00212910 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.157 0.8338331895935654 32 AMTR_s00017p00243480 evm_27.TU.AmTr_v1.0_scaffold00017.221 0.8337784419032845 33 AMTR_s00071p00180880 MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.184 0.8329156667337377 34 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.8327978447753589 35 AMTR_s00044p00063370 evm_27.TU.AmTr_v1.0_scaffold00044.34 0.8319995112246565 36 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.8317264848303225 37 AMTR_s00040p00057740 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor DPBF3, AREB3, evm_27.TU.AmTr_v1.0_scaffold00040.27 0.8313945195067151 38 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor EIL1, AtEIL1, evm_27.TU.AmTr_v1.0_scaffold00119.91 0.8312104991691647 39 AMTR_s00029p00127080 evm_27.TU.AmTr_v1.0_scaffold00029.145 0.8300247459518656 40 AMTR_s00103p00147670 evm_27.TU.AmTr_v1.0_scaffold00103.105 0.8296601725900514 41 AMTR_s00078p00179790 evm_27.TU.AmTr_v1.0_scaffold00078.177 0.829317108197046 42 AMTR_s00016p00239400 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter ATKT4, KUP3, ATKUP3, evm_27.TU.AmTr_v1.0_scaffold00016.248 0.8287875402333803 43 AMTR_s00175p00042660 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00175.17 0.8279242500850115 44 AMTR_s00024p00176520 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00024.135 0.8278711880554984 97 AMTR_s00019p00091080 evm_27.TU.AmTr_v1.0_scaffold00019.67 0.8276007679994093 46 AMTR_s00002p00225810 RNA biosynthesis.transcriptional activation.bHLH transcription factor ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1, evm_27.TU.AmTr_v1.0_scaffold00002.248 0.8275781325516977 47 AMTR_s00061p00182310 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.6-phosphogluconate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00061.203 0.827478926964351 52 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8274681543711488 69 AMTR_s00002p00223990 evm_27.TU.AmTr_v1.0_scaffold00002.244 0.8261553523263513 50 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.8261050949547923 51 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1, evm_27.TU.AmTr_v1.0_scaffold00032.93 0.824959572598027 52 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8244331990118928 53 AMTR_s00033p00228810 evm_27.TU.AmTr_v1.0_scaffold00033.219 0.8242096548077474 54 AMTR_s00029p00239010 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.nPLC-type phospholipase C NPC1, evm_27.TU.AmTr_v1.0_scaffold00029.401 0.8237752127909659 55 AMTR_s00069p00049300 RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor evm_27.TU.AmTr_v1.0_scaffold00069.29 0.8234804496736311 56 AMTR_s00059p00106830 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor IDD2, AtIDD2, evm_27.TU.AmTr_v1.0_scaffold00059.81 0.823335576300372 57 AMTR_s00017p00139310 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00017.63 0.8228855075480015 58 AMTR_s00095p00122180 Protein modification.protein folding and quality control.RAC ribosome-associated chaperone complex.ZRF Hsp40-chaperone component evm_27.TU.AmTr_v1.0_scaffold00095.75 0.8222935052376523 59 AMTR_s00068p00075130 5-adenylylsulfate reductase-like 7 OS=Arabidopsis thaliana ATAPRL7, APRL7, evm_27.TU.AmTr_v1.0_scaffold00068.32 0.8210639233406025 60 AMTR_s00058p00174910 Enzyme classification.EC_1 oxidoreductases.EC_1.17 oxidoreductase acting on CH or CH2 group FDH, evm_27.TU.AmTr_v1.0_scaffold00058.164 0.8207715993915401 61 AMTR_s00029p00222940 Josephin-like protein OS=Arabidopsis thaliana JOSL, evm_27.TU.AmTr_v1.0_scaffold00029.341 0.8207357967833978 62 AMTR_s00039p00196630 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.KAT 3-ketoacyl-CoA thiolase KAT2, PKT3, PED1, evm_27.TU.AmTr_v1.0_scaffold00039.161 0.8205600441686824 63 AMTR_s00023p00110940 evm_27.TU.AmTr_v1.0_scaffold00023.55 0.8203708017491287 64 AMTR_s00061p00090590 Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.68 0.8198915171425087 65 AMTR_s00058p00125550 evm_27.TU.AmTr_v1.0_scaffold00058.89 0.8196262721223202 66 AMTR_s00059p00119420 Solute transport.porins.OEP24 outer membrane porin evm_27.TU.AmTr_v1.0_scaffold00059.93 0.8194677949004846 67 AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB44, SAUL1, ATPUB44, evm_27.TU.AmTr_v1.0_scaffold00044.147 0.8181887122953874 68 AMTR_s00030p00045700 Cytoskeleton.microfilament network.actin filament protein ACT7, evm_27.TU.AmTr_v1.0_scaffold00030.17 0.8180859954195334 69 AMTR_s00078p00023610 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00078.6 0.8166720935920279 70 AMTR_s00007p00243380 evm_27.TU.AmTr_v1.0_scaffold00007.258 0.8155295687220031 71 AMTR_s00007p00083810 Carbohydrate metabolism.fermentation.lactic acid fermentation.L-lactate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00007.48 0.8141739218111818 73 AMTR_s00029p00143630 Protein modification.protein folding and quality control.NAC ribosome-associated chaperone complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00029.167 0.814114301540486 74 AMTR_s00055p00167390 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F, evm_27.TU.AmTr_v1.0_scaffold00055.87 0.8125751706646299 75 AMTR_s00001p00257700 evm_27.TU.AmTr_v1.0_scaffold00001.352 0.812294298197257 76 AMTR_s00016p00203440 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase evm_27.TU.AmTr_v1.0_scaffold00016.170 0.8118813208046664 77 AMTR_s00002p00245890 Chromatin organisation.histone modifications.histone deacetylation.SHL1 histone deacetylation complex recruiting protein EBS, evm_27.TU.AmTr_v1.0_scaffold00002.329 0.8114666795829363 79 AMTR_s00019p00254960 Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.437 0.8110912474891303 80 AMTR_s00016p00224460 evm_27.TU.AmTr_v1.0_scaffold00016.206 0.8094050131380425 81 AMTR_s00154p00089740 Putative methylesterase 11, chloroplastic OS=Arabidopsis thaliana ATMES11, MES11, evm_27.TU.AmTr_v1.0_scaffold00154.60 0.8087275545260669 82 AMTR_s00080p00126880 Glycerol-3-phosphate acyltransferase 9 OS=Arabidopsis thaliana GPAT9, evm_27.TU.AmTr_v1.0_scaffold00080.52 0.8076868105608617 83 AMTR_s00148p00081780 Protein modification.lipidation.N-terminal myristoylation.N-myristoyltransferase ATNMT1, NMT1, evm_27.TU.AmTr_v1.0_scaffold00148.54 0.8074108222659313 84 AMTR_s00045p00185750 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC15 component evm_27.TU.AmTr_v1.0_scaffold00045.231 0.8072289576940986 85 AMTR_s00022p00095970 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00022.75 0.8067662092370216 86 AMTR_s00727p00010990 Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum HCT, evm_27.TU.AmTr_v1.0_scaffold00727.2 0.8064939658155403 87 AMTR_s00137p00027820 Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum HCT, evm_27.TU.AmTr_v1.0_scaffold00137.5 0.8061967226213459 88 AMTR_s00049p00097260 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD6, evm_27.TU.AmTr_v1.0_scaffold00049.68 0.8056984316082964 89 AMTR_s00154p00032290 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component ATEXO70F1, EXO70F1, evm_27.TU.AmTr_v1.0_scaffold00154.13 0.8052870116948448 90 AMTR_s00001p00273040 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter ATNRAMP2, NRAMP2, evm_27.TU.AmTr_v1.0_scaffold00001.588 0.8045955714294192 92 AMTR_s00041p00174550 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132, evm_27.TU.AmTr_v1.0_scaffold00041.131 0.8044737229501754 93 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor EIF4A-2, evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8043495339998489 98 AMTR_s00181p00038960 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71B37, evm_27.TU.AmTr_v1.0_scaffold00181.21 0.8042182591544645 95 AMTR_s00036p00123720 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00036.53 0.8036756239185602 96 AMTR_s00079p00145040 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP5 component evm_27.TU.AmTr_v1.0_scaffold00079.62 0.8035662639132891 98 AMTR_s00038p00188490 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade F phosphatase PAPP2C, evm_27.TU.AmTr_v1.0_scaffold00038.131 0.8033174917315289 98 AMTR_s00029p00138620 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component ATATG18G, ATG18G, evm_27.TU.AmTr_v1.0_scaffold00029.160 0.8030476011164838 99 AMTR_s00101p00147880 Lipid metabolism.galactolipid and sulfolipid synthesis.digalactosyldiacylglycerol synthase DGD2, evm_27.TU.AmTr_v1.0_scaffold00101.122 0.8027455039354615 100