Sequence Description Alias PCC hrr AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana emb2458, evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9316879731989415 29 AMTR_s00048p00141020 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.89 0.925470205802465 9 AMTR_s00002p00259560 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD, evm_27.TU.AmTr_v1.0_scaffold00002.437 0.9201914291598643 46 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease TRZ4, evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9182512664156817 93 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) ATPARP2, PARP2, evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9180885761386213 60 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana emb2004, evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9163188656745825 80 AMTR_s00099p00147110 EMB140, evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9147837881192087 62 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323, evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9146400059201132 87 AMTR_s00130p00019530 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana DOT4, evm_27.TU.AmTr_v1.0_scaffold00130.4 0.9140631334987812 9 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana CIP111, evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9120484610750914 87 AMTR_s00023p00028640 SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.6 0.9114942086746939 23 AMTR_s00061p00202160 Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.245 0.9110852020403029 13 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9101410586489334 69 AMTR_s00036p00170130 Nudix hydrolase 3 OS=Arabidopsis thaliana atnudt3, NUDT3, evm_27.TU.AmTr_v1.0_scaffold00036.84 0.909156364596112 54 AMTR_s00058p00123890 evm_27.TU.AmTr_v1.0_scaffold00058.86 0.9090028376586708 23 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3, evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9087537361427308 85 AMTR_s00025p00124790 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.114 0.9075325169738727 21 AMTR_s00101p00092140 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.69 0.9070063049283373 48 AMTR_s00088p00069780 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00088.41 0.9064422652335261 24 AMTR_s00106p00113730 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM, evm_27.TU.AmTr_v1.0_scaffold00106.86 0.9062418542435352 45 AMTR_s00032p00104970 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1, evm_27.TU.AmTr_v1.0_scaffold00032.66 0.9049319403025575 33 AMTR_s00105p00044870 Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00105.19 0.9038908478111729 28 AMTR_s00029p00147240 Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.173 0.903850024581914 40 AMTR_s00007p00157660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component evm_27.TU.AmTr_v1.0_scaffold00007.120 0.9031252454119534 45 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.8994737945960585 38 AMTR_s00029p00248990 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component evm_27.TU.AmTr_v1.0_scaffold00029.453 0.8980639751838119 37 AMTR_s00045p00210490 evm_27.TU.AmTr_v1.0_scaffold00045.287 0.8979337342585058 35 AMTR_s00131p00071060 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase PDS3, PDS, PDE226, evm_27.TU.AmTr_v1.0_scaffold00131.42 0.8970629548731553 92 AMTR_s00071p00175860 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120, evm_27.TU.AmTr_v1.0_scaffold00071.178 0.8969180833360897 83 AMTR_s00029p00198810 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3, evm_27.TU.AmTr_v1.0_scaffold00029.275 0.8952885983542541 76 AMTR_s00021p00235990 emb1703, evm_27.TU.AmTr_v1.0_scaffold00021.238 0.8932288918935334 81 AMTR_s00010p00220510 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.SEL1/PDM1 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00010.234 0.8907549753166616 55 AMTR_s00062p00195710 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047, evm_27.TU.AmTr_v1.0_scaffold00062.205 0.8893801703640324 60 AMTR_s00019p00093260 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana SLO1, evm_27.TU.AmTr_v1.0_scaffold00019.69 0.8880915691410638 63 AMTR_s00027p00223150 evm_27.TU.AmTr_v1.0_scaffold00027.94 0.8865880382537733 88 AMTR_s00149p00066780 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade C phosphatase PLL1, evm_27.TU.AmTr_v1.0_scaffold00149.43 0.8860345013581568 74 AMTR_s00066p00166910 evm_27.TU.AmTr_v1.0_scaffold00066.190 0.8854715497502106 77 AMTR_s00010p00247870 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.340 0.8849505644341985 78 AMTR_s00005p00204930 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component SYN3, ATRAD21.2, ATSYN3, evm_27.TU.AmTr_v1.0_scaffold00005.82 0.8848372917868949 98 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.8847670879690358 80 AMTR_s00007p00268660 evm_27.TU.AmTr_v1.0_scaffold00007.394 0.8844412901935145 83 AMTR_s00009p00214080 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.147 0.8842603331755311 98 AMTR_s00012p00264440 Coenzyme metabolism.tetrahydrofolate synthesis.folyl-polyglutamate synthetase FPGS1, ATDFB, DFB, evm_27.TU.AmTr_v1.0_scaffold00012.361 0.8841970093371434 85 AMTR_s00033p00156340 Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.100 0.8838139831052754 88 AMTR_s00059p00181750 Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.195 0.8825865986185115 91 AMTR_s00025p00222570 evm_27.TU.AmTr_v1.0_scaffold00025.312 0.882140477696492 93