Sequence Description Alias PCC hrr AMTR_s00038p00179320 Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.121 0.9208902919792972 1 AMTR_s00049p00146760 RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS6/CFIm68 component evm_27.TU.AmTr_v1.0_scaffold00049.127 0.8976396380524927 2 AMTR_s00157p00050850 Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.NDC80 component evm_27.TU.AmTr_v1.0_scaffold00157.17 0.8751738516049574 3 AMTR_s00049p00131010 DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00049.108 0.8717482441839473 5 AMTR_s00136p00031470 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component NFC04, MSI4, NFC4, ACG1, FVE, ATMSI4, evm_27.TU.AmTr_v1.0_scaffold00136.8 0.8665216425563189 6 AMTR_s00029p00224260 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTB component EMB1691, evm_27.TU.AmTr_v1.0_scaffold00029.347 0.8594372399324627 6 AMTR_s00111p00036140 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase RDO4, HUB1, evm_27.TU.AmTr_v1.0_scaffold00111.18 0.8591766798968266 37 AMTR_s00010p00227020 evm_27.TU.AmTr_v1.0_scaffold00010.254 0.8570080593058562 8 AMTR_s00066p00114140 evm_27.TU.AmTr_v1.0_scaffold00066.105 0.8522952462110881 9 AMTR_s00010p00245480 Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.327 0.8487579785048578 10 AMTR_s00010p00170700 evm_27.TU.AmTr_v1.0_scaffold00010.136 0.8466934167134342 24 AMTR_s00049p00165770 Multi-process regulation.TOR signalling pathway.MRF TOR-dependent protein translation regulator evm_27.TU.AmTr_v1.0_scaffold00049.153 0.8441023614793215 12 AMTR_s00019p00176530 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.diacylglycerol kinase DGK7, ATDGK7, evm_27.TU.AmTr_v1.0_scaffold00019.178 0.8440267599412157 42 AMTR_s00146p00039020 Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor evm_27.TU.AmTr_v1.0_scaffold00146.19 0.8406021092041486 14 AMTR_s00068p00205920 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) MAPR4, AtMAPR4, evm_27.TU.AmTr_v1.0_scaffold00068.184 0.8396846041050231 61 AMTR_s00037p00235640 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component EIF3B-2, ATEIF3B-2, EIF3B, evm_27.TU.AmTr_v1.0_scaffold00037.156 0.8390777418730815 16 AMTR_s00124p00117530 evm_27.TU.AmTr_v1.0_scaffold00124.25 0.8355036706034452 18 AMTR_s00110p00061160 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.small subunit evm_27.TU.AmTr_v1.0_scaffold00110.27 0.8341754584925385 38 AMTR_s00005p00204230 Transcription factor GTE10 OS=Arabidopsis thaliana NPX1, evm_27.TU.AmTr_v1.0_scaffold00005.81 0.8327108761651103 20 AMTR_s00077p00192220 Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.231 0.8253705456260236 21 AMTR_s00007p00266960 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SPT20/ADA5 component evm_27.TU.AmTr_v1.0_scaffold00007.379 0.8244538978960686 25 AMTR_s00037p00237830 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUH, evm_27.TU.AmTr_v1.0_scaffold00037.160 0.8229429651117625 89 AMTR_s00010p00178800 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.assembly.HCC/SCO1 component evm_27.TU.AmTr_v1.0_scaffold00010.145 0.8213593026385041 51 AMTR_s00029p00156090 evm_27.TU.AmTr_v1.0_scaffold00029.185 0.8202029561594875 25 AMTR_s00057p00198730 Potassium transporter 5 OS=Oryza sativa subsp. japonica HAK5, ATHAK5, evm_27.TU.AmTr_v1.0_scaffold00057.228 0.8176021366709042 76 AMTR_s00068p00175830 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00068.130 0.8134056986321538 27 AMTR_s00076p00102070 Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.28 0.8123443606418291 28 AMTR_s00039p00231550 Nucleotide-sugar uncharacterized transporter 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.219 0.8060270976904041 49 AMTR_s00042p00156780 Protein arginine N-methyltransferase PRMT10 OS=Oryza sativa subsp. indica PRMT10, ATPRMT10, evm_27.TU.AmTr_v1.0_scaffold00042.43 0.8029513129061638 38 AMTR_s00066p00125170 La-related protein 6B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.118 0.8023010286362242 35 AMTR_s00002p00065920 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.IBA57 component evm_27.TU.AmTr_v1.0_scaffold00002.29 0.7984718222289594 87 AMTR_s00047p00072890 Protein modification.N-linked glycosylation.complex N-glycan maturation.GnT-II-type N-acetylglucosaminyltransferase evm_27.TU.AmTr_v1.0_scaffold00047.16 0.7983461720518108 38 AMTR_s00025p00196500 Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana MBD02, ATMBD2, MBD2, evm_27.TU.AmTr_v1.0_scaffold00025.248 0.7977851042890709 39 AMTR_s00033p00200750 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00033.165 0.7952621785853161 48 AMTR_s00077p00144570 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00077.144 0.7934172088017162 42 AMTR_s00064p00199910 Protein modification.phosphorylation.TKL kinase superfamily.LRR-III kinase evm_27.TU.AmTr_v1.0_scaffold00064.97 0.7911541291977554 43 AMTR_s00135p00092810 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.N-succinyl 5-aminoimidazole-4-carboxamide RN synthase PUR7, PURC, ATPURC, evm_27.TU.AmTr_v1.0_scaffold00135.51 0.7850563412276031 48 AMTR_s00071p00135320 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component evm_27.TU.AmTr_v1.0_scaffold00071.120 0.7847777038318265 49 AMTR_s00041p00201270 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ROC3, evm_27.TU.AmTr_v1.0_scaffold00041.182 0.7838784689191912 84 AMTR_s00069p00071970 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component FRD4, CPFTSY, evm_27.TU.AmTr_v1.0_scaffold00069.43 0.7834466948565018 49 AMTR_s00014p00243510 Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E3 dihydrolipoamide dehydrogenase component mtLPD2, evm_27.TU.AmTr_v1.0_scaffold00014.114 0.7834151894524316 50 AMTR_s00092p00113360 RNA biosynthesis.transcriptional activation.TCP transcription factor TCP2, evm_27.TU.AmTr_v1.0_scaffold00092.72 0.7765347972681036 54 AMTR_s00085p00047010 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.FIP37 regulatory component ATFIP37, FIP37, evm_27.TU.AmTr_v1.0_scaffold00085.20 0.7743837893878136 56 AMTR_s00012p00256620 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00012.298 0.7731815333369754 57 AMTR_s00056p00094740 Phytohormones.gibberellin.synthesis.ent-kaurenoic acid oxidase GA3, CYP701A3, ATKO1, evm_27.TU.AmTr_v1.0_scaffold00056.69 0.7723028784518808 60 AMTR_s00032p00171780 evm_27.TU.AmTr_v1.0_scaffold00032.145 0.7707252868014658 61 AMTR_s00065p00197200 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase CIPK6, SIP3, ATCIPK6, SNRK3.14, evm_27.TU.AmTr_v1.0_scaffold00065.172 0.7699724319485771 62 AMTR_s00100p00114870 evm_27.TU.AmTr_v1.0_scaffold00100.36 0.7698728810011185 65 AMTR_s00069p00126080 BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana BAG1, ATBAG1, evm_27.TU.AmTr_v1.0_scaffold00069.87 0.7693317220445134 64 AMTR_s00088p00156860 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-2 component PBB2, evm_27.TU.AmTr_v1.0_scaffold00088.126 0.7679871774123009 67 AMTR_s00003p00125760 evm_27.TU.AmTr_v1.0_scaffold00003.94 0.767643883542567 86 AMTR_s00002p00270380 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.OTP86 RNA editing factor OTP86, evm_27.TU.AmTr_v1.0_scaffold00002.581 0.7672537190923583 69 AMTR_s00020p00168290 Protein Iojap-related, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.61 0.7667466208957332 71 AMTR_s00010p00055380 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.assembly phase.TAH18 component evm_27.TU.AmTr_v1.0_scaffold00010.28 0.7653653905064818 73 AMTR_s00129p00035520 Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase evm_27.TU.AmTr_v1.0_scaffold00129.14 0.7644604608265576 74 AMTR_s00187p00015520 evm_27.TU.AmTr_v1.0_scaffold00187.1 0.7644402263650878 100 AMTR_s00001p00231880 evm_27.TU.AmTr_v1.0_scaffold00001.246 0.7621125694432842 76 AMTR_s00022p00184660 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.198 0.7597634801364558 80 AMTR_s00049p00144030 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.NDC1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.124 0.7576248477884789 82 AMTR_s00066p00053070 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp3 assembly factor evm_27.TU.AmTr_v1.0_scaffold00066.28 0.7575031299011551 83 AMTR_s00109p00050620 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase ATPDIL1-6, PDI4, ATPDI4, PDIL1-6, evm_27.TU.AmTr_v1.0_scaffold00109.37 0.7517230378062671 100 AMTR_s00017p00234440 evm_27.TU.AmTr_v1.0_scaffold00017.191 0.7509896866695456 89 AMTR_s00012p00223410 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.PCRK kinase evm_27.TU.AmTr_v1.0_scaffold00012.172 0.7480919923946587 92 AMTR_s00059p00130960 RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor evm_27.TU.AmTr_v1.0_scaffold00059.107 0.743991606647129 97 AMTR_s00002p00265350 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 7 NRPE7, evm_27.TU.AmTr_v1.0_scaffold00002.496 0.7435966267953887 98 AMTR_s00030p00156320 RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor evm_27.TU.AmTr_v1.0_scaffold00030.96 0.7434004887669196 99