Sequence Description Alias PCC hrr AMTR_s00004p00111480 RNA processing.RNA decay.exosome complex.associated co-factors.RRP6L exoribonuclease evm_27.TU.AmTr_v1.0_scaffold00004.91 0.9256722580899907 2 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component EIF4A-III, evm_27.TU.AmTr_v1.0_scaffold00029.87 0.9216888431128447 8 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9200859742789601 66 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9129388984283492 74 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9108127996287446 49 AMTR_s00005p00222320 Protoporphyrinogen oxidase 2 OS=Spinacia oleracea MEE61, PPO2, HEMG2, evm_27.TU.AmTr_v1.0_scaffold00005.96 0.9107853360255515 7 AMTR_s00065p00199990 Chromatin organisation.DNA methylation.non-canonical RNA-directed DNA methylation.SGS3 stabilization factor ATSGS3, SGS3, evm_27.TU.AmTr_v1.0_scaffold00065.182 0.9071558350363722 11 AMTR_s00164p00040330 evm_27.TU.AmTr_v1.0_scaffold00164.15 0.9065279693395853 10 AMTR_s00058p00185710 evm_27.TU.AmTr_v1.0_scaffold00058.180 0.906422981520967 29 AMTR_s00016p00241100 ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.254 0.9062972936797625 24 AMTR_s00069p00204310 evm_27.TU.AmTr_v1.0_scaffold00069.223 0.905773551683206 57 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16, evm_27.TU.AmTr_v1.0_scaffold00682.1 0.9036964363128036 34 AMTR_s00028p00234070 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS34/PI3K phosphatidylinositol 3-kinase component ATVPS34, PI3K, VPS34, evm_27.TU.AmTr_v1.0_scaffold00028.115 0.9030435091049787 17 AMTR_s00067p00136180 Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica 0.9007387679233412 45 AMTR_s00247p00015290 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.classical PTP phosphatase ATPTP1, PTP1, evm_27.TU.AmTr_v1.0_scaffold00247.3 0.8994012687893078 51 AMTR_s00032p00104970 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1, evm_27.TU.AmTr_v1.0_scaffold00032.66 0.8974538015927649 70 AMTR_s00069p00165540 TRFL10, evm_27.TU.AmTr_v1.0_scaffold00069.140 0.897210817393898 24 AMTR_s00001p00265330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit XPB1, ATXPB1, evm_27.TU.AmTr_v1.0_scaffold00001.403 0.8967495888324115 44 AMTR_s00057p00206860 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.248 0.8963153474935778 27 AMTR_s00044p00033620 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Etl1 chromatin remodeling factor CHA19, CHR19, ETL1, evm_27.TU.AmTr_v1.0_scaffold00044.10 0.8953945343384945 86 AMTR_s00119p00129000 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.NUFIP assembly factor evm_27.TU.AmTr_v1.0_scaffold00119.102 0.8952811897275716 84 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana FAS4, ATFAS4, evm_27.TU.AmTr_v1.0_scaffold00101.70 0.8945219685278986 75 AMTR_s00036p00205320 Protein degradation.peptidase families.metallopeptidase activities.M16 families.PQQL-like peptidase evm_27.TU.AmTr_v1.0_scaffold00036.122 0.8937656921645039 85 AMTR_s00046p00223780 Protein degradation.peptidase families.metallopeptidase activities.M3 protease evm_27.TU.AmTr_v1.0_scaffold00046.160 0.8934364817395404 64 AMTR_s00159p00049090 evm_27.TU.AmTr_v1.0_scaffold00159.16 0.8933802978381022 35 AMTR_s00071p00110320 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00071.85 0.8931350362235062 36 AMTR_s00009p00244590 evm_27.TU.AmTr_v1.0_scaffold00009.231 0.8926149287027874 88 AMTR_s00053p00089490 Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.44 0.8913142841147436 44 AMTR_s00008p00028880 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00008.9 0.8909446460101189 45 AMTR_s00058p00198540 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00058.200 0.8902245580964258 47 AMTR_s00019p00077820 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein DRP3A, ADL2, evm_27.TU.AmTr_v1.0_scaffold00019.54 0.8892591749021557 48 AMTR_s00040p00236410 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF14 component TAF14B, GAS41, evm_27.TU.AmTr_v1.0_scaffold00040.306 0.8887624368283584 50 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.8886237343283674 51 AMTR_s00077p00092950 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00077.76 0.8871066355400846 74 AMTR_s00102p00032910 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.pullulanase-type enzyme ATLDA, ATPU1, LDA, PU1, evm_27.TU.AmTr_v1.0_scaffold00102.10 0.8862817322054231 58 AMTR_s00023p00252370 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP2) MAP2B, evm_27.TU.AmTr_v1.0_scaffold00023.248 0.885386866242937 60 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.8852515472671229 61 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica HUB2, evm_27.TU.AmTr_v1.0_scaffold00024.144 0.884755735610616 76 AMTR_s00166p00076690 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.PUF2 plant-specific RAB5 effector evm_27.TU.AmTr_v1.0_scaffold00166.44 0.883799827467762 66 AMTR_s00018p00042060 evm_27.TU.AmTr_v1.0_scaffold00018.11 0.8828488814991705 70 AMTR_s00145p00081540 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex.MON1/SAND component evm_27.TU.AmTr_v1.0_scaffold00145.30 0.8825631665400913 87 AMTR_s00182p00016710 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3, evm_27.TU.AmTr_v1.0_scaffold00182.5 0.8811097189705922 78 AMTR_s00012p00235430 0.8802071489617502 90 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8800306314561666 82 AMTR_s00001p00126200 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease evm_27.TU.AmTr_v1.0_scaffold00001.101 0.8796547782304852 83 AMTR_s00077p00181870 evm_27.TU.AmTr_v1.0_scaffold00077.206 0.8795558248263836 84 AMTR_s00148p00070260 Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.44 0.8795411967876858 85 AMTR_s00002p00252610 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1, evm_27.TU.AmTr_v1.0_scaffold00002.371 0.8788161259197993 88 AMTR_s00010p00058910 RNA processing.organelle machineries.RNA editing.ORRM-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00010.32 0.8782657957521105 94 AMTR_s00004p00121730 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.107 0.8775262153113926 97 AMTR_s00038p00236980 RNA biosynthesis.RNA polymerase I-dependent transcription.CCG/MEE12 transcription initiation factor MEE12, evm_27.TU.AmTr_v1.0_scaffold00038.242 0.8773635644126475 98