Sequence Description Alias PCC hrr AMTR_s00126p00080460 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OTP82, evm_27.TU.AmTr_v1.0_scaffold00126.37 0.926285800814987 1 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9257089610723304 35 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component EMB2016, evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9247383630120785 9 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin EMB3012, evm_27.TU.AmTr_v1.0_scaffold00049.202 0.918267837981584 56 AMTR_s00148p00090060 Helicase protein MOM1 OS=Arabidopsis thaliana MOM1, MOM, evm_27.TU.AmTr_v1.0_scaffold00148.61 0.9159896955876212 18 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9124086137173819 81 AMTR_s00019p00174630 evm_27.TU.AmTr_v1.0_scaffold00019.176 0.9083649876826613 34 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor HUA1, evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9076969790415732 66 AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component SRCAP, PIE1, chr13, evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9056522062686467 61 AMTR_s00030p00239430 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.208 0.9048114067677976 24 AMTR_s00099p00111970 Chromatin organisation.DNA methylation.non-canonical RNA-directed DNA methylation.SGS3 stabilization factor ATSGS3, SGS3, evm_27.TU.AmTr_v1.0_scaffold00099.95 0.9047101076101647 71 AMTR_s00062p00152740 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1, evm_27.TU.AmTr_v1.0_scaffold00062.140 0.9032664345172149 13 AMTR_s00110p00131760 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA, evm_27.TU.AmTr_v1.0_scaffold00110.106 0.9031470087489875 19 AMTR_s00092p00126260 evm_27.TU.AmTr_v1.0_scaffold00092.90 0.902865762519673 15 AMTR_s00057p00026390 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00057.10 0.9016670300285673 17 AMTR_s00029p00058110 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.52 0.9007673789855826 29 AMTR_s00056p00217370 emb2411, evm_27.TU.AmTr_v1.0_scaffold00056.212 0.9002909042581865 26 AMTR_s00027p00246350 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana GFA2, evm_27.TU.AmTr_v1.0_scaffold00027.153 0.8954981907145386 54 AMTR_s00106p00090850 evm_27.TU.AmTr_v1.0_scaffold00106.59 0.8951648269812056 23 AMTR_s00045p00173390 Protein degradation.peptidase families.serine-type peptidase activities.LON protease LON_ARA_ARA, LON1, evm_27.TU.AmTr_v1.0_scaffold00045.207 0.8948860481503159 77 AMTR_s00071p00070350 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase ATKRS-1, evm_27.TU.AmTr_v1.0_scaffold00071.41 0.8933103625058861 92 AMTR_s00069p00095730 EDA7, evm_27.TU.AmTr_v1.0_scaffold00069.60 0.8931761171536685 27 AMTR_s00099p00054090 evm_27.TU.AmTr_v1.0_scaffold00099.37 0.8918674520036858 28 AMTR_s00039p00135490 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP1/TAC3 component PTAC3, evm_27.TU.AmTr_v1.0_scaffold00039.93 0.8884888712197699 35 AMTR_s00009p00185150 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) ATPARP2, PARP2, evm_27.TU.AmTr_v1.0_scaffold00009.115 0.8875148841643465 38 AMTR_s00088p00153240 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00088.123 0.8874319129390352 68 AMTR_s00034p00221180 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00034.92 0.8832214659890396 58 AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor VSR2;2, ATVSR3, BP80-2;2, VSR3, evm_27.TU.AmTr_v1.0_scaffold00164.25 0.8804941526009853 97 AMTR_s00060p00127160 evm_27.TU.AmTr_v1.0_scaffold00060.67 0.8802100446689487 48 AMTR_s00022p00128600 RNA biosynthesis.transcriptional activation.ARID transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.121 0.879020596817809 84 AMTR_s00023p00196820 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 1 NRPC1, evm_27.TU.AmTr_v1.0_scaffold00023.137 0.8761791187702151 60 AMTR_s00010p00149200 Phytohormones.auxin.synthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase atToc64-III, TOC64-III, evm_27.TU.AmTr_v1.0_scaffold00010.107 0.8739261413161757 66 AMTR_s00006p00267510 Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana ATMBD9, MBD9, evm_27.TU.AmTr_v1.0_scaffold00006.303 0.8735835150055784 67 AMTR_s00012p00261500 Probable methyltransferase PMT11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.324 0.8731053247284271 69 AMTR_s00056p00059990 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.PWP2/UTP1 assembly factor PWP2, ATPWP2, evm_27.TU.AmTr_v1.0_scaffold00056.40 0.871716858011324 71 AMTR_s00048p00053570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor TOZ, evm_27.TU.AmTr_v1.0_scaffold00048.18 0.8705919719405447 78 AMTR_s00058p00055710 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00058.25 0.8700059012488786 80 AMTR_s00019p00211360 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component evm_27.TU.AmTr_v1.0_scaffold00019.256 0.8698142806403718 81 AMTR_s00049p00026890 Protein modification.phosphorylation.PEK kinase GCN2, evm_27.TU.AmTr_v1.0_scaffold00049.14 0.8696287952880125 84 AMTR_s00049p00071550 Cell division control protein 48 homolog C OS=Arabidopsis thaliana emb1354, CDC48C, evm_27.TU.AmTr_v1.0_scaffold00049.44 0.8688867901636755 88 AMTR_s00032p00058660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00032.37 0.8688800219603643 89 AMTR_s00127p00108450 evm_27.TU.AmTr_v1.0_scaffold00127.27 0.8679385291295191 91 AMTR_s00040p00215000 DNA damage response.DNA repair mechanisms.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1) DME, evm_27.TU.AmTr_v1.0_scaffold00040.230 0.866961818020989 94 AMTR_s00046p00010710 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component SYN3, ATRAD21.2, ATSYN3, evm_27.TU.AmTr_v1.0_scaffold00046.1 0.8658337972208435 97