Sequence Description Alias PCC hrr AMTR_s00029p00193780 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana FLN1, evm_27.TU.AmTr_v1.0_scaffold00029.262 0.929918302980833 2 AMTR_s00090p00120760 RNA processing.ribonuclease activities.RNase Z endoribonuclease CPZ, TRZ2, evm_27.TU.AmTr_v1.0_scaffold00090.59 0.9158523029466973 13 AMTR_s00136p00085920 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00136.44 0.9151669769815124 34 AMTR_s00002p00194810 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component CLPR4, evm_27.TU.AmTr_v1.0_scaffold00002.176 0.9099124096221575 29 AMTR_s00120p00092320 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen LUT5, CYP97A3, evm_27.TU.AmTr_v1.0_scaffold00120.41 0.909909030755348 5 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.909491025095803 20 AMTR_s00130p00019530 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana DOT4, evm_27.TU.AmTr_v1.0_scaffold00130.4 0.9089034785071134 15 AMTR_s00058p00057440 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor EMB93, SOLDAT10, evm_27.TU.AmTr_v1.0_scaffold00058.26 0.9071298653159727 8 AMTR_s00071p00072250 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.42 0.9065122787130665 30 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor FLN2, evm_27.TU.AmTr_v1.0_scaffold00047.167 0.903560084846306 52 AMTR_s00021p00196260 evm_27.TU.AmTr_v1.0_scaffold00021.159 0.8975701965654509 33 AMTR_s00049p00103660 Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.78 0.896584872327582 12 AMTR_s00058p00109040 evm_27.TU.AmTr_v1.0_scaffold00058.63 0.8948244604674337 13 AMTR_s00013p00250400 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase Z-ISO1.1, Z-ISO, Z-ISO1.2, evm_27.TU.AmTr_v1.0_scaffold00013.225 0.8947841420948375 14 AMTR_s00011p00203340 GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.71 0.8918829253806786 44 AMTR_s00066p00130420 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.123 0.8880980323185887 25 AMTR_s00038p00071780 Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.30 0.8880941250317526 60 AMTR_s00011p00233950 Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana 0.8878545294805553 59 AMTR_s00062p00185880 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CH-CPN60A, CPN60A, SLP, evm_27.TU.AmTr_v1.0_scaffold00062.184 0.8877517163277174 53 AMTR_s00056p00047160 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083, evm_27.TU.AmTr_v1.0_scaffold00056.29 0.8868052962773812 54 AMTR_s00039p00150510 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB, evm_27.TU.AmTr_v1.0_scaffold00039.103 0.884021394488852 22 AMTR_s00001p00173820 Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.164 0.8837511997564382 83 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8822850789631131 62 AMTR_s00007p00156370 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4, evm_27.TU.AmTr_v1.0_scaffold00007.117 0.8817592956474417 81 AMTR_s00021p00235220 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.236 0.879493536403311 35 AMTR_s00007p00268660 evm_27.TU.AmTr_v1.0_scaffold00007.394 0.8779913381905838 56 AMTR_s00224p00011500 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana MRL1, evm_27.TU.AmTr_v1.0_scaffold00224.3 0.8775482549027488 63 AMTR_s00010p00220510 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.SEL1/PDM1 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00010.234 0.8773772208493503 33 AMTR_s00039p00053980 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00039.21 0.8758526879135176 84 AMTR_s00010p00055110 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP3 component evm_27.TU.AmTr_v1.0_scaffold00010.27 0.8757833777935741 90 AMTR_s00028p00187760 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein Hsp89.1, AtHsp90-6, AtHsp90.6, evm_27.TU.AmTr_v1.0_scaffold00028.80 0.8751757043698768 43 AMTR_s00041p00057360 evm_27.TU.AmTr_v1.0_scaffold00041.29 0.8750366794504448 39 AMTR_s00126p00126070 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic22 component evm_27.TU.AmTr_v1.0_scaffold00126.65 0.8717087377073367 55 AMTR_s00088p00159600 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00088.130 0.8712854394922839 47 AMTR_s00067p00038470 CJD1, evm_27.TU.AmTr_v1.0_scaffold00067.21 0.8681965169061377 93 AMTR_s00103p00143070 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.100 0.8681232082801869 67 AMTR_s00045p00200960 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein LPA1, evm_27.TU.AmTr_v1.0_scaffold00045.260 0.8681205544591718 75 AMTR_s00031p00067070 Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana emb1899, EMB175, EMB166 0.8679139117825573 66 AMTR_s00033p00075910 emb1273, evm_27.TU.AmTr_v1.0_scaffold00033.33 0.866303196812339 57 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8653538699168946 94 AMTR_s00055p00224220 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme EMB2729, BE1, evm_27.TU.AmTr_v1.0_scaffold00055.175 0.8637988144504152 86 AMTR_s00077p00156540 Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica ATNSI, NSI, evm_27.TU.AmTr_v1.0_scaffold00077.160 0.8633282111416264 100 AMTR_s00032p00226710 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1, evm_27.TU.AmTr_v1.0_scaffold00032.243 0.8625542427789477 79 AMTR_s00106p00119930 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1, evm_27.TU.AmTr_v1.0_scaffold00106.91 0.8621373264521743 66 AMTR_s00002p00270350 Solute transport.carrier-mediated transport.MFS superfamily.NTT ATP:ADP antiporter ATNTT2, evm_27.TU.AmTr_v1.0_scaffold00002.579 0.8599140368598156 64 AMTR_s00148p00072380 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00148.47 0.8594320820222224 66 AMTR_s00177p00028500 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.5 0.8573167100016441 72 AMTR_s00119p00133730 EMB1241, evm_27.TU.AmTr_v1.0_scaffold00119.109 0.8562919043155198 72 AMTR_s00111p00145980 Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00111.128 0.851578227010731 81 AMTR_s00033p00193140 evm_27.TU.AmTr_v1.0_scaffold00033.150 0.8507768746189261 88 AMTR_s00101p00112120 Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.85 0.8506567459368428 89 AMTR_s00057p00165960 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase PCB2, evm_27.TU.AmTr_v1.0_scaffold00057.167 0.8505545316120775 90 AMTR_s00165p00016900 evm_27.TU.AmTr_v1.0_scaffold00165.3 0.8502364270063748 93 AMTR_s00149p00067730 evm_27.TU.AmTr_v1.0_scaffold00149.45 0.848666803978066 96 AMTR_s00032p00177680 Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.153 0.8483452762359097 99