Sequence Description Alias PCC hrr AMTR_s00032p00034370 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE evm_27.TU.AmTr_v1.0_scaffold00032.15 0.9554545982287826 1 AMTR_s00019p00231050 Uncharacterized protein At2g39910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.315 0.9532994057092814 2 AMTR_s00009p00268760 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1, evm_27.TU.AmTr_v1.0_scaffold00009.431 0.9466568993276104 7 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana RST1, evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9397321880663676 18 AMTR_s00076p00181180 Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.69 0.937022666533824 5 AMTR_s00169p00027470 Cell cycle.interphase.DNA replication.telomere replication.telomere integrity maintenance complex.CTC1 component CTC1, ATCTC1, evm_27.TU.AmTr_v1.0_scaffold00169.14 0.9352455129126561 27 AMTR_s00048p00149840 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.102 0.9339405916757387 10 AMTR_s00002p00268800 evm_27.TU.AmTr_v1.0_scaffold00002.541 0.9319262911854063 21 AMTR_s00059p00178020 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC3 component SEC3A, evm_27.TU.AmTr_v1.0_scaffold00059.189 0.9298336795947741 70 AMTR_s00068p00178640 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component evm_27.TU.AmTr_v1.0_scaffold00068.135 0.9285155144358238 39 AMTR_s00163p00014030 Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00163.1 0.927496745344714 23 AMTR_s00001p00272880 Cell wall.hemicellulose.xyloglucan.modification and degradation.1,2-alpha-fucosidase FUC95A, evm_27.TU.AmTr_v1.0_scaffold00001.572 0.9271057971852855 13 AMTR_s00022p00251260 RNA processing.organelle machineries.RNA modification.tRNA thiolation.MnmA pathway.tRNA thiouridylase evm_27.TU.AmTr_v1.0_scaffold00022.388 0.9268605543274736 27 AMTR_s00025p00136470 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione biosynthesis.glutathione synthetase (GS) GSHB, GSH2, evm_27.TU.AmTr_v1.0_scaffold00025.139 0.9260488077414756 14 AMTR_s00007p00258060 50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.309 0.924423088045169 15 AMTR_s00111p00138070 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase EDD, EDD1, evm_27.TU.AmTr_v1.0_scaffold00111.118 0.9242951800855018 35 AMTR_s00007p00266080 Protein WHATS THIS FACTOR 1 OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00007.368 0.9238288432132973 18 AMTR_s00019p00204140 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS52/POK component POK, TTD8, ATVPS52, evm_27.TU.AmTr_v1.0_scaffold00019.240 0.9223908741064039 51 AMTR_s00066p00040550 Probable methyltransferase PMT18 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.17 0.9205335745691923 21 AMTR_s00101p00125820 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3, evm_27.TU.AmTr_v1.0_scaffold00101.99 0.9202119935067098 22 AMTR_s00009p00264940 Choline transporter protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.378 0.9184219961040889 24 AMTR_s00057p00192540 evm_27.TU.AmTr_v1.0_scaffold00057.216 0.9182190204687473 25 AMTR_s05169p00002110 evm_27.TU.AmTr_v1.0_scaffold05169.1 0.9181990087036203 26 AMTR_s00062p00112400 evm_27.TU.AmTr_v1.0_scaffold00062.92 0.9175749145893005 27 AMTR_s00056p00146390 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.9165918084621691 28 AMTR_s00033p00242600 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK2 kinase SRK2E, ATOST1, SNRK2-6, SNRK2.6, OST1, P44, evm_27.TU.AmTr_v1.0_scaffold00033.261 0.9160876463257662 29 AMTR_s00089p00029710 Sialyltransferase-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00089.8 0.915321470879008 30 AMTR_s00032p00169270 evm_27.TU.AmTr_v1.0_scaffold00032.140 0.9150895546673925 31 AMTR_s00024p00219730 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.212 0.9140183717609531 32 AMTR_s00009p00266540 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.396 0.9132918627867436 79 AMTR_s00062p00074600 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.pPLA2-I-type phospholipase A2 evm_27.TU.AmTr_v1.0_scaffold00062.46 0.9123466775642433 48 AMTR_s00024p00249000 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecG-type DNA translocase evm_27.TU.AmTr_v1.0_scaffold00024.324 0.912278575137797 44 AMTR_s00049p00161820 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component ALB4, ARTEMIS, evm_27.TU.AmTr_v1.0_scaffold00049.149 0.9113033996435121 37 AMTR_s00044p00170650 evm_27.TU.AmTr_v1.0_scaffold00044.189 0.9100370248580089 84 AMTR_s00209p00021130 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.2 0.9095847968387417 41 AMTR_s00106p00100050 MEE44, evm_27.TU.AmTr_v1.0_scaffold00106.71 0.9092846716517449 42 AMTR_s00005p00265200 Protein biosynthesis.organelle translation machineries.translation initiation.methionyl-tRNA formyltransferase pde194, evm_27.TU.AmTr_v1.0_scaffold00005.223 0.908683950896121 43 AMTR_s00092p00091040 evm_27.TU.AmTr_v1.0_scaffold00092.51 0.9084693167515927 44 AMTR_s00088p00128580 DNA damage response.DNA repair mechanisms.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1) DML1, ROS1, evm_27.TU.AmTr_v1.0_scaffold00088.93 0.90739111695165 45 AMTR_s00031p00010980 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component evm_27.TU.AmTr_v1.0_scaffold00031.1 0.9071600260424415 46 AMTR_s00008p00155920 evm_27.TU.AmTr_v1.0_scaffold00008.78 0.9069885264425985 81 AMTR_s00057p00204760 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.iron/zinc cation transporter (Fe/Zn-CDF-type) evm_27.TU.AmTr_v1.0_scaffold00057.242 0.9069613503547327 48 AMTR_s00159p00058480 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana EMB2654, evm_27.TU.AmTr_v1.0_scaffold00159.22 0.9065967246947928 82 AMTR_s00111p00074750 Lipid metabolism.sphingolipid metabolism.ceramide kinase evm_27.TU.AmTr_v1.0_scaffold00111.47 0.904603456513958 63 AMTR_s00062p00145630 CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00062.132 0.9039559747940673 56 AMTR_s00047p00125370 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1, evm_27.TU.AmTr_v1.0_scaffold00047.50 0.9037636388028899 100 AMTR_s00002p00266990 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP, evm_27.TU.AmTr_v1.0_scaffold00002.516 0.9031480336708516 59 AMTR_s00077p00193670 Cell cycle.cytokinesis.preprophase microtubule organization.MOR1 microtubule-associated protein MOR1, GEM1, evm_27.TU.AmTr_v1.0_scaffold00077.237 0.9027407647129904 85 AMTR_s00013p00192790 evm_27.TU.AmTr_v1.0_scaffold00013.125 0.9018186600335448 62 AMTR_s00030p00041970 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor EMB2219, evm_27.TU.AmTr_v1.0_scaffold00030.14 0.9008524023386145 65 AMTR_s00045p00048330 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.30 0.9007267072387166 66 AMTR_s00009p00202340 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.129 0.9006673267841423 67 AMTR_s00030p00222710 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.171 0.9004280810052464 68 AMTR_s00009p00261490 evm_27.TU.AmTr_v1.0_scaffold00009.333 0.9001692522509528 70 AMTR_s00009p00259240 evm_27.TU.AmTr_v1.0_scaffold00009.307 0.899658566952857 72 AMTR_s00003p00258520 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component CLUB, AtTRS130, evm_27.TU.AmTr_v1.0_scaffold00003.322 0.8996373395237391 73 AMTR_s00038p00036580 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase ATHMA2, HMA2, evm_27.TU.AmTr_v1.0_scaffold00038.14 0.8995648753910979 74 AMTR_s00001p00269990 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT3 protease ATSBT3.5, SBT3.5, evm_27.TU.AmTr_v1.0_scaffold00001.453 0.8990884796658408 75 AMTR_s00029p00242750 Protein root UVB sensitive 5 OS=Arabidopsis thaliana RUS5, evm_27.TU.AmTr_v1.0_scaffold00029.424 0.8989109129655802 76 AMTR_s00001p00209450 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.GDP1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00001.215 0.898161178283567 79 AMTR_s00159p00086290 evm_27.TU.AmTr_v1.0_scaffold00159.35 0.8979901834427484 82 AMTR_s00069p00176780 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP704A2, evm_27.TU.AmTr_v1.0_scaffold00069.157 0.8978860464500328 83 AMTR_s00016p00242110 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.258 0.8978106015362093 84 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD1, evm_27.TU.AmTr_v1.0_scaffold00047.38 0.8973466095323509 87 AMTR_s00004p00076010 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.59 0.8963038402307895 88 AMTR_s00026p00236160 evm_27.TU.AmTr_v1.0_scaffold00026.132 0.8957770536437537 89 AMTR_s00074p00196560 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00074.124 0.8956442836292221 90 AMTR_s00019p00063770 evm_27.TU.AmTr_v1.0_scaffold00019.42 0.8955767746971526 91 AMTR_s00041p00230870 evm_27.TU.AmTr_v1.0_scaffold00041.273 0.8952572863628998 94 AMTR_s00119p00032770 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor SPK1, evm_27.TU.AmTr_v1.0_scaffold00119.17 0.8945330478651529 99 AMTR_s00067p00074620 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO4 transport karyopherin evm_27.TU.AmTr_v1.0_scaffold00067.50 0.8938468910879815 98 AMTR_s00096p00014800 evm_27.TU.AmTr_v1.0_scaffold00096.3 0.8937726501783875 99 AMTR_s00131p00018340 evm_27.TU.AmTr_v1.0_scaffold00131.2 0.893634658703155 100