Sequence Description Alias PCC hrr AMTR_s00012p00226630 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein RDM12, IDN2, evm_27.TU.AmTr_v1.0_scaffold00012.177 0.9576826003934484 1 AMTR_s00045p00192570 B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.243 0.9434655914040613 2 AMTR_s00008p00203110 Protein argonaute 4A OS=Oryza sativa subsp. japonica AGO4, OCP11, evm_27.TU.AmTr_v1.0_scaffold00008.122 0.9421458907229575 8 AMTR_s00003p00270010 Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NDB-type NAD(P)H dehydrogenase NDB3, evm_27.TU.AmTr_v1.0_scaffold00003.424 0.941032826249874 5 AMTR_s00047p00208430 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1, evm_27.TU.AmTr_v1.0_scaffold00047.147 0.9395384864004537 5 AMTR_s00047p00213160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00047.154 0.9383938979021518 26 AMTR_s00026p00051870 RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator complex.DRB7 component DCL4, ATDCL4, evm_27.TU.AmTr_v1.0_scaffold00026.17 0.9374778671877012 7 AMTR_s00008p00203230 Protein argonaute 16 OS=Oryza sativa subsp. japonica AGO6, evm_27.TU.AmTr_v1.0_scaffold00008.123 0.9364115859996083 9 AMTR_s00022p00212920 DNA topoisomerase 6 subunit B OS=Oryza sativa subsp. indica TOP6B, BIN3, HYP6, RHL3, ATTOP6B, evm_27.TU.AmTr_v1.0_scaffold00022.251 0.9328802106011377 68 AMTR_s00021p00171430 evm_27.TU.AmTr_v1.0_scaffold00021.124 0.9316249848415039 10 AMTR_s00049p00016550 evm_27.TU.AmTr_v1.0_scaffold00049.6 0.9305450617755957 16 AMTR_s00106p00105070 Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.75 0.9302692488805527 12 AMTR_s00057p00139000 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase MEE32, EMB3004, evm_27.TU.AmTr_v1.0_scaffold00057.123 0.9297062978230834 26 AMTR_s00019p00203030 Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.238 0.9291231201548177 14 AMTR_s00067p00206040 evm_27.TU.AmTr_v1.0_scaffold00067.228 0.9285402966156395 15 AMTR_s00039p00125380 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1, evm_27.TU.AmTr_v1.0_scaffold00039.79 0.9278991862589236 80 AMTR_s00045p00062170 RNA processing.RNA modification.rRNA/tRNA methylation.TRM13 tRNA adenosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00045.45 0.9263441120241691 50 AMTR_s00004p00118340 evm_27.TU.AmTr_v1.0_scaffold00004.101 0.926160691157056 47 AMTR_s00099p00073140 Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.53 0.9243026435133269 19 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana CIP111, evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9240397020912958 48 AMTR_s00048p00228530 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XIII kinase families.LRR-XIIIa kinase FEI1, evm_27.TU.AmTr_v1.0_scaffold00048.222 0.9239826465129849 49 AMTR_s00200p00040190 evm_27.TU.AmTr_v1.0_scaffold00200.16 0.9237176677244415 22 AMTR_s00148p00070910 Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.45 0.9236484786279214 95 AMTR_s00106p00113730 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM, evm_27.TU.AmTr_v1.0_scaffold00106.86 0.9235172251061883 24 AMTR_s00025p00178950 evm_27.TU.AmTr_v1.0_scaffold00025.215 0.9222712999858645 25 AMTR_s00053p00133100 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component MUS81, ATMUS81, evm_27.TU.AmTr_v1.0_scaffold00053.83 0.9222201575589016 26 AMTR_s00024p00204830 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.187 0.9210950200200855 27 AMTR_s00079p00185530 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS1 splicing factor ATCRS1, CRS1, evm_27.TU.AmTr_v1.0_scaffold00079.106 0.9187358213643412 28 AMTR_s00012p00239180 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor TRP2, ATTRP2, TRFL1, evm_27.TU.AmTr_v1.0_scaffold00012.208 0.9183557597799602 29 AMTR_s00004p00160120 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.172 0.9183010138490878 30 AMTR_s00032p00190520 Protein degradation.ER-associated protein degradation (ERAD) machinery.PNG1 peptide:N-glycanase AtPNG1, PNG1, evm_27.TU.AmTr_v1.0_scaffold00032.172 0.9175578663285203 45 AMTR_s00066p00131520 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.125 0.9171327992496062 98 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9168306392045054 99 AMTR_s00025p00247730 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component SMC5, evm_27.TU.AmTr_v1.0_scaffold00025.399 0.9150948834168847 53 AMTR_s00066p00157030 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.162 0.914518537915709 43 AMTR_s00021p00237290 Uncharacterized protein At4g10930 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.243 0.9136967804942292 52 AMTR_s00095p00117390 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase CIPK3, SnRK3.17, evm_27.TU.AmTr_v1.0_scaffold00095.73 0.9129124225897524 38 AMTR_s00040p00222820 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.257 0.9107104179644955 49 AMTR_s00077p00118560 Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.108 0.9104495627403737 40 AMTR_s00016p00166940 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group SOL2, CRN, evm_27.TU.AmTr_v1.0_scaffold00016.126 0.91038603446136 41 AMTR_s00044p00081650 Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica ATPARP1, PARP1, PP, APP, evm_27.TU.AmTr_v1.0_scaffold00044.52 0.9101872215446216 42 AMTR_s00078p00067180 Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana EMB2261, evm_27.TU.AmTr_v1.0_scaffold00078.40 0.9096811224934851 88 AMTR_s00027p00231240 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) evm_27.TU.AmTr_v1.0_scaffold00027.113 0.9088748280169886 45 AMTR_s00002p00259560 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD, evm_27.TU.AmTr_v1.0_scaffold00002.437 0.9081963641744122 87 AMTR_s00022p00054670 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein KCBP, ZWI, PKCBP 0.9076349032748451 48 AMTR_s00030p00217190 evm_27.TU.AmTr_v1.0_scaffold00030.164 0.9074426880873829 49 AMTR_s00029p00233630 evm_27.TU.AmTr_v1.0_scaffold00029.375 0.9073707528867087 50 AMTR_s00061p00028660 0.906599001968544 51 AMTR_s00110p00099550 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.61 0.9065472376401363 55 AMTR_s00004p00117700 RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator complex.DRB4 component DRB3, evm_27.TU.AmTr_v1.0_scaffold00004.100 0.9063223760438883 61 AMTR_s00061p00215990 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.WYRD inner centromere protein evm_27.TU.AmTr_v1.0_scaffold00061.279 0.9062342431627058 70 AMTR_s00005p00184610 Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana SRF7, evm_27.TU.AmTr_v1.0_scaffold00005.64 0.9052667746142828 55 AMTR_s00052p00146690 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component ATRAD21.3, SYN4, evm_27.TU.AmTr_v1.0_scaffold00052.52 0.9052139287234163 75 AMTR_s00068p00202400 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00068.176 0.9051700006497408 57 AMTR_s00109p00125940 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.9047306284719939 58 AMTR_s00167p00034910 Cell wall.hemicellulose.xyloglucan.modification and degradation.1,2-alpha-fucosidase FUC95A, evm_27.TU.AmTr_v1.0_scaffold00167.14 0.9038777921197745 59 AMTR_s00023p00250230 Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.238 0.9033480078166125 63 AMTR_s00030p00234170 evm_27.TU.AmTr_v1.0_scaffold00030.193 0.9032491602535578 61 AMTR_s00071p00201620 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase ATFP8, RABD1, ATRABD1, evm_27.TU.AmTr_v1.0_scaffold00071.221 0.9020319306718521 62 AMTR_s00081p00144410 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00081.55 0.9015735052054575 63 AMTR_s00044p00056920 evm_27.TU.AmTr_v1.0_scaffold00044.28 0.9012899392394764 64 AMTR_s00061p00202270 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00061.246 0.9011404175978129 66 AMTR_s00007p00240820 evm_27.TU.AmTr_v1.0_scaffold00007.253 0.9010897048261685 67 AMTR_s00101p00092140 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.69 0.8999151938827572 68 AMTR_s00072p00182810 B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica RTV1, evm_27.TU.AmTr_v1.0_scaffold00072.131 0.8998579367576784 69 AMTR_s00012p00229720 Factor of DNA methylation 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.183 0.8995728222426748 70 AMTR_s00058p00127730 evm_27.TU.AmTr_v1.0_scaffold00058.92 0.8989007852026559 71 AMTR_s00005p00212300 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00005.91 0.8987727788552927 72 AMTR_s00008p00266190 evm_27.TU.AmTr_v1.0_scaffold00008.227 0.8987387153387991 92 AMTR_s00025p00222570 evm_27.TU.AmTr_v1.0_scaffold00025.312 0.8981135989939774 74 AMTR_s00079p00166070 evm_27.TU.AmTr_v1.0_scaffold00079.78 0.8980991092472245 78 AMTR_s00149p00057710 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU80 component ATKU80, KU80, evm_27.TU.AmTr_v1.0_scaffold00149.36 0.8980769301445561 76 AMTR_s00185p00017870 Protein MAIN-LIKE 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00185.2 0.8977310071238552 77 AMTR_s00047p00206550 evm_27.TU.AmTr_v1.0_scaffold00047.141 0.897549779321213 79 AMTR_s00079p00050740 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS11, evm_27.TU.AmTr_v1.0_scaffold00079.14 0.8970825982382581 80 AMTR_s00109p00075250 Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.ABIL component evm_27.TU.AmTr_v1.0_scaffold00109.58 0.8970673347667497 81 AMTR_s00036p00207520 Solute transport.channels.Ca-ClC-type calcium-dependent anion channel evm_27.TU.AmTr_v1.0_scaffold00036.125 0.8970156529952585 96 AMTR_s00040p00129780 F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.97 0.8965904954446211 83 AMTR_s00023p00028640 SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.6 0.8959386043679589 85 AMTR_s00016p00231800 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XV kinase CLI1, RPK2, TOAD2, evm_27.TU.AmTr_v1.0_scaffold00016.228 0.8956807592866484 86 AMTR_s00084p00090740 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-1 motor protein evm_27.TU.AmTr_v1.0_scaffold00084.26 0.8947635665460008 88 AMTR_s00010p00267530 Nutrient uptake.phosphorus assimilation.phosphate uptake.PHO1 phosphate transporter evm_27.TU.AmTr_v1.0_scaffold00010.539 0.8946661710022688 89 AMTR_s00045p00091940 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.85 0.8928936521873767 93 AMTR_s01360p00009540 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold01360.1 0.8924524399544138 94 AMTR_s00045p00211840 Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.291 0.8913973714040888 96 AMTR_s00175p00048000 CPUORF47, evm_27.TU.AmTr_v1.0_scaffold00175.21 0.8910267511506639 98 AMTR_s00129p00036660 Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00129.16 0.8909393250203117 98 AMTR_s00052p00146950 evm_27.TU.AmTr_v1.0_scaffold00052.53 0.8906742138916635 99 AMTR_s00075p00081460 DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA phosphatase (ZDP) evm_27.TU.AmTr_v1.0_scaffold00075.19 0.890605098102164 100