Sequence Description Alias PCC hrr AMTR_s00011p00266610 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73/Ysh1 component CPSF73-I, evm_27.TU.AmTr_v1.0_scaffold00011.232 0.9545887434416598 1 AMTR_s00007p00244990 evm_27.TU.AmTr_v1.0_scaffold00007.262 0.9533691706497859 2 AMTR_s00004p00079950 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit evm_27.TU.AmTr_v1.0_scaffold00004.65 0.9519314117683942 3 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9464473860837256 4 AMTR_s00025p00221910 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase ATPRMT5, PRMT5, SKB1, evm_27.TU.AmTr_v1.0_scaffold00025.311 0.9370317159602978 7 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor DEX1, evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9370202099644968 6 AMTR_s00114p00123360 evm_27.TU.AmTr_v1.0_scaffold00114.56 0.932936856544893 7 AMTR_s00155p00043060 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase ATIMD2, IMD2, evm_27.TU.AmTr_v1.0_scaffold00155.21 0.9302117759935086 8 AMTR_s00036p00225190 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component evm_27.TU.AmTr_v1.0_scaffold00036.165 0.9299814309900187 9 AMTR_s00029p00078080 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component STT3B, evm_27.TU.AmTr_v1.0_scaffold00029.71 0.9270905572684824 10 AMTR_s00022p00221050 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO2 export karyopherin evm_27.TU.AmTr_v1.0_scaffold00022.277 0.9264503930839024 11 AMTR_s00010p00016450 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00010.5 0.9231656633224129 19 AMTR_s00039p00212570 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MAC3 component MAC3A, evm_27.TU.AmTr_v1.0_scaffold00039.183 0.920783616175036 13 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor HUA1, evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9166264246432255 34 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.9156708351180876 18 AMTR_s00122p00082000 Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component AAA1, LUE1, FTR, ATKTN1, FRC2, FRA2, ERH3, KTN1, BOT1, evm_27.TU.AmTr_v1.0_scaffold00122.30 0.9155070549073457 21 AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor VSR2;2, ATVSR3, BP80-2;2, VSR3, evm_27.TU.AmTr_v1.0_scaffold00164.25 0.9139054450355426 18 AMTR_s00166p00033890 Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.16 0.9127305039441687 18 AMTR_s00049p00173980 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit evm_27.TU.AmTr_v1.0_scaffold00049.162 0.9121502913349077 34 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.9121443484958094 20 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9102592758031129 44 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.9093186067045655 22 AMTR_s00056p00052520 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component STT3A, evm_27.TU.AmTr_v1.0_scaffold00056.33 0.9093098357511955 23 AMTR_s00049p00219600 evm_27.TU.AmTr_v1.0_scaffold00049.255 0.9089866126133517 46 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP7, evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9075680175880684 69 AMTR_s00101p00117720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma evm_27.TU.AmTr_v1.0_scaffold00101.91 0.907497993990164 64 AMTR_s00106p00013240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.SWA2/NOC1 assembly factor EDA25, SWA2, evm_27.TU.AmTr_v1.0_scaffold00106.3 0.9071289041445357 28 AMTR_s00066p00162800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component OLI5, RPL5A, PGY3, ATL5, evm_27.TU.AmTr_v1.0_scaffold00066.175 0.9068269222313131 29 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9052164078020499 46 AMTR_s00003p00265190 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,6-glucuronosyltransferase evm_27.TU.AmTr_v1.0_scaffold00003.366 0.9050671411062925 31 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica HUB2, evm_27.TU.AmTr_v1.0_scaffold00024.144 0.9041734475872779 32 AMTR_s00016p00256760 Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.345 0.9036831828152008 33 AMTR_s00053p00089490 Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.44 0.903627201968576 34 AMTR_s00023p00236700 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00023.196 0.9033339301245178 35 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor IMP4, evm_27.TU.AmTr_v1.0_scaffold00101.112 0.9032874968203031 36 AMTR_s00105p00039650 evm_27.TU.AmTr_v1.0_scaffold00105.16 0.9028783650704572 47 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.9021080919718887 38 AMTR_s00009p00263550 ABC transporter F family member 3 OS=Arabidopsis thaliana GCN3, ATGCN3, evm_27.TU.AmTr_v1.0_scaffold00009.359 0.9018087305513968 39 AMTR_s00057p00038540 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00057.18 0.9010709283425391 40 AMTR_s00057p00168150 Uncharacterized protein At2g33490 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.175 0.9009397445777729 41 AMTR_s00060p00054700 RNA biosynthesis.transcriptional activation.NAC transcription factor ANAC008, SOG1, evm_27.TU.AmTr_v1.0_scaffold00060.14 0.9002097802646482 42 AMTR_s00022p00128600 RNA biosynthesis.transcriptional activation.ARID transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.121 0.9000498712655015 43 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8992215989334919 44 AMTR_s00001p00270540 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00001.464 0.8989868287453882 59 AMTR_s00064p00050700 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00064.11 0.8984915132440258 46 AMTR_s00099p00073810 Uncharacterized protein At5g08430 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.54 0.897902156280213 47 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.8976775122060794 85 AMTR_s00061p00067260 High mobility group B protein 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.42 0.8974323049232965 49 AMTR_s00029p00238480 evm_27.TU.AmTr_v1.0_scaffold00029.400 0.8968289212921452 50 AMTR_s00025p00231520 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.CG1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00025.337 0.8959860466574923 52 AMTR_s00045p00160070 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00045.179 0.8951878337482809 53 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.8950133554296266 54 AMTR_s00014p00128310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase evm_27.TU.AmTr_v1.0_scaffold00014.46 0.8948135035381484 78 AMTR_s00067p00020220 Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana RUS2, WXR1, evm_27.TU.AmTr_v1.0_scaffold00067.5 0.8941929786807576 56 AMTR_s00111p00056660 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00111.28 0.894097497200181 57 AMTR_s00009p00263810 Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana ACBP2, evm_27.TU.AmTr_v1.0_scaffold00009.362 0.8937729503321798 59 AMTR_s00027p00245240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).SNU114/U5-116kDa snRNP component CLO, GFA1, MEE5, evm_27.TU.AmTr_v1.0_scaffold00027.151 0.8931825752395183 61 AMTR_s00025p00115250 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS11 component VPS11, ATVPS11, evm_27.TU.AmTr_v1.0_scaffold00025.104 0.8931465765735559 62 AMTR_s00012p00261500 Probable methyltransferase PMT11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.324 0.8929910247594631 63 AMTR_s00029p00111280 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13 component BBC1, RSU2, ATBBC1, evm_27.TU.AmTr_v1.0_scaffold00029.120 0.8928033455005205 64 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.8924932218008644 65 AMTR_s00060p00125310 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.64 0.8924372204660107 66 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.8921777163766481 68 AMTR_s00012p00230440 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein RDM12, IDN2, evm_27.TU.AmTr_v1.0_scaffold00012.185 0.8917734812045661 70 AMTR_s00027p00246350 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana GFA2, evm_27.TU.AmTr_v1.0_scaffold00027.153 0.8914580844889067 71 AMTR_s00136p00065750 Cellular respiration.glycolysis.cytosolic glycolysis.phosphofructokinase activities.pyrophosphate-dependent phosphofructokinase evm_27.TU.AmTr_v1.0_scaffold00136.32 0.8912706379499309 72 AMTR_s00065p00209640 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M17 leucyl aminopeptidase (LAP) evm_27.TU.AmTr_v1.0_scaffold00065.204 0.8907890998793965 73 AMTR_s00055p00026270 ELF5, evm_27.TU.AmTr_v1.0_scaffold00055.7 0.8893114323876888 74 AMTR_s00011p00092240 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.PMD division factor evm_27.TU.AmTr_v1.0_scaffold00011.24 0.8892817298870591 75 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana AtLa1, La1, evm_27.TU.AmTr_v1.0_scaffold00109.42 0.8887543348607814 82 AMTR_s00010p00163740 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component ALY4, evm_27.TU.AmTr_v1.0_scaffold00010.126 0.8876143405393324 79 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.8871798192930368 81 AMTR_s00016p00168950 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor HSS, ARF1-BP, ARF2, ORE14, evm_27.TU.AmTr_v1.0_scaffold00016.128 0.8870447078893541 82 AMTR_s00004p00168920 Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.187 0.886705451234818 86 AMTR_s00171p00023840 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00171.4 0.886629053293743 87 AMTR_s00110p00064100 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOB1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00110.28 0.8860047582749486 89 AMTR_s00059p00214550 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP58 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00059.254 0.8858948495857188 91 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana SMU2, evm_27.TU.AmTr_v1.0_scaffold00007.316 0.8858130437019709 98 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor At-RSZ22a, RSZ22a, evm_27.TU.AmTr_v1.0_scaffold00019.143 0.8856531906411437 93 AMTR_s00062p00152740 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1, evm_27.TU.AmTr_v1.0_scaffold00062.140 0.885300848308493 95 AMTR_s00099p00155940 RNA biosynthesis.transcriptional activation.Alfin-like transcription factor AL5, evm_27.TU.AmTr_v1.0_scaffold00099.152 0.8851195581566139 96 AMTR_s00019p00231450 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component CSN5B, CSN5, AJH2, evm_27.TU.AmTr_v1.0_scaffold00019.317 0.8850688514359334 97 AMTR_s00078p00131720 Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana IQD31, evm_27.TU.AmTr_v1.0_scaffold00078.109 0.8849242633060349 98 AMTR_s00034p00138310 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP2 component AtELP2, ELP2, evm_27.TU.AmTr_v1.0_scaffold00034.41 0.8844841901857236 99 AMTR_s00098p00100110 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component ATATG18F, G18F, ATG18F, evm_27.TU.AmTr_v1.0_scaffold00098.28 0.8843142685933648 100