Sequence Description Alias PCC hrr AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana SC35, ATSC35, At-SC35, evm_27.TU.AmTr_v1.0_scaffold00176.28 0.971685093226052 1 AMTR_s00040p00218420 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.small subunit U2AF35B, ATU2AF35B, evm_27.TU.AmTr_v1.0_scaffold00040.235 0.9561279720395427 2 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit UVH6, ATXPD, evm_27.TU.AmTr_v1.0_scaffold00025.17 0.955666192813399 3 AMTR_s00039p00226980 PRP39, evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9525392080666844 4 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase SEC, evm_27.TU.AmTr_v1.0_scaffold00013.214 0.9502136175604962 6 AMTR_s00030p00083820 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1, evm_27.TU.AmTr_v1.0_scaffold00030.33 0.9483473339926178 6 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2, evm_27.TU.AmTr_v1.0_scaffold00122.38 0.945887517243395 7 AMTR_s00090p00109700 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.ketoacyl-ACP synthase (mtKAS) evm_27.TU.AmTr_v1.0_scaffold00090.50 0.9414393882066321 12 AMTR_s00092p00098010 ATILP1, ILP1, evm_27.TU.AmTr_v1.0_scaffold00092.55 0.93944993204353 9 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.9373014159655982 12 AMTR_s00154p00021020 Protein RIK OS=Zea mays RIK, evm_27.TU.AmTr_v1.0_scaffold00154.5 0.9370917359953138 11 AMTR_s00041p00141370 evm_27.TU.AmTr_v1.0_scaffold00041.101 0.9368919413275739 23 AMTR_s00016p00255820 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00016.335 0.9368478245649993 13 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator ARC6, evm_27.TU.AmTr_v1.0_scaffold00182.17 0.9363312863356724 15 AMTR_s00047p00125370 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1, evm_27.TU.AmTr_v1.0_scaffold00047.50 0.9350176677474062 16 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1, evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9338726162571792 24 AMTR_s00047p00208850 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1, evm_27.TU.AmTr_v1.0_scaffold00047.148 0.9323638459403083 17 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9315285723109422 18 AMTR_s00025p00188170 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-59K snRNP component evm_27.TU.AmTr_v1.0_scaffold00025.229 0.9313655318404985 19 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component ATTAF6, TAF6, TAFII59, evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9311946708458276 27 AMTR_s00016p00255950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.338 0.9304157353735237 21 AMTR_s00041p00073060 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol dehydrogenase HDH, HISN8, ATHDH, evm_27.TU.AmTr_v1.0_scaffold00041.43 0.9304148415980034 22 AMTR_s00006p00267030 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).RBM25 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00006.296 0.9302375342835285 23 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9302045157813371 69 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme NAD-ME1, evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9296533971136383 25 AMTR_s00029p00248140 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana 0.9273291164326208 26 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9272566887611787 67 AMTR_s00153p00060550 Probable methyltransferase PMT23 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.27 0.9269572281123664 28 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG30, ATX2, evm_27.TU.AmTr_v1.0_scaffold00049.91 0.9267709622139155 75 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor AHK2, HK2, evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9255751911797323 30 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9252211006394316 44 AMTR_s00002p00258740 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.427 0.9251437883773002 32 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2, evm_27.TU.AmTr_v1.0_scaffold00013.78 0.924529466932147 33 AMTR_s00173p00060580 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00173.16 0.924498162661433 34 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9243061022517518 66 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.924306058139521 36 AMTR_s00033p00059780 Protein modification.lipidation.Cys-linked S-acylation.protein S-acyltransferase TIP1, evm_27.TU.AmTr_v1.0_scaffold00033.26 0.9235622740776767 37 AMTR_s00138p00108220 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component evm_27.TU.AmTr_v1.0_scaffold00138.52 0.922367149103965 39 AMTR_s00077p00193670 Cell cycle.cytokinesis.preprophase microtubule organization.MOR1 microtubule-associated protein MOR1, GEM1, evm_27.TU.AmTr_v1.0_scaffold00077.237 0.9220562598071631 40 AMTR_s00007p00267150 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP107 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00007.380 0.9215742127430775 57 AMTR_s00016p00254170 evm_27.TU.AmTr_v1.0_scaffold00016.320 0.9212734002711551 42 AMTR_s00149p00042870 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00149.21 0.9209856490760729 43 AMTR_s00047p00204500 evm_27.TU.AmTr_v1.0_scaffold00047.137 0.920299814542106 44 AMTR_s00010p00086200 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component TAF2, evm_27.TU.AmTr_v1.0_scaffold00010.48 0.920238530866945 45 AMTR_s00016p00255310 Transportin MOS14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.333 0.919201437575651 46 AMTR_s00006p00266490 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana AAE17, evm_27.TU.AmTr_v1.0_scaffold00006.289 0.9190828717821521 47 AMTR_s00025p00184490 evm_27.TU.AmTr_v1.0_scaffold00025.223 0.9177839351125751 49 AMTR_s00033p00242600 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK2 kinase SRK2E, ATOST1, SNRK2-6, SNRK2.6, OST1, P44, evm_27.TU.AmTr_v1.0_scaffold00033.261 0.917753413662383 50 AMTR_s00173p00035440 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PININ component evm_27.TU.AmTr_v1.0_scaffold00173.5 0.9173860931141682 52 AMTR_s00154p00076410 Cell division control protein 48 homolog B OS=Arabidopsis thaliana CDC48B, evm_27.TU.AmTr_v1.0_scaffold00154.50 0.916748994502652 54 AMTR_s00004p00159650 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.171 0.9165418385744125 56 AMTR_s00077p00181380 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component MED33A, RFR1, evm_27.TU.AmTr_v1.0_scaffold00077.205 0.9160700313142711 57 AMTR_s00040p00229490 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.myotubularin lipid phosphatase AtMTM1, MTM1, evm_27.TU.AmTr_v1.0_scaffold00040.275 0.9154987984773405 58 AMTR_s00046p00168380 Flowering time control protein FCA OS=Arabidopsis thaliana FCA, evm_27.TU.AmTr_v1.0_scaffold00046.92 0.9153698400967302 59 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9151551355057775 60 AMTR_s00063p00197920 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.78 0.9148847097958013 61 AMTR_s02210p00008540 AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02210.1 0.9148071524725112 62 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2, evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9145646298211025 84 AMTR_s00009p00202340 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.129 0.914278165221327 64 AMTR_s00111p00097580 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type) CAT9, evm_27.TU.AmTr_v1.0_scaffold00111.70 0.9139695557347494 65 AMTR_s00002p00088870 Nucleotide metabolism.purines.salvage pathway.IMP dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00002.44 0.9137162908548687 66 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9127948169186683 67 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.9125579371911795 68 AMTR_s00044p00170650 evm_27.TU.AmTr_v1.0_scaffold00044.189 0.9119581293871214 77 AMTR_s00004p00179740 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase BSL1, evm_27.TU.AmTr_v1.0_scaffold00004.204 0.9118566178034736 70 AMTR_s00092p00046430 Protein modification.N-linked glycosylation.dolichol-phosphate-linked oligosaccharide precursor assembly.ALG8 alpha-1,3-glucosyltransferase evm_27.TU.AmTr_v1.0_scaffold00092.19 0.9116296880876205 71 AMTR_s00078p00109260 evm_27.TU.AmTr_v1.0_scaffold00078.82 0.9115214606309116 72 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component TOR, evm_27.TU.AmTr_v1.0_scaffold00060.9 0.9111511717785389 73 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155, evm_27.TU.AmTr_v1.0_scaffold00060.71 0.910954077751908 75 AMTR_s00058p00048170 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.phosphoribosyanthranilate isomerase TRP6, PAI1, evm_27.TU.AmTr_v1.0_scaffold00058.19 0.9108039274708094 76 AMTR_s00029p00027850 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin ATVIIIA, VIIIA, evm_27.TU.AmTr_v1.0_scaffold00029.10 0.9105553744792239 83 AMTR_s00057p00025530 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00057.9 0.9105034866816976 78 AMTR_s00027p00053690 DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana UVR7, ERCC1, evm_27.TU.AmTr_v1.0_scaffold00027.8 0.9104218460497054 79 AMTR_s00037p00133170 evm_27.TU.AmTr_v1.0_scaffold00037.57 0.9101781950255816 80 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.9100422304195029 81 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14, evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9089479468140266 84 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.9088544745481402 84 AMTR_s00186p00032060 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 2 NRPA2, evm_27.TU.AmTr_v1.0_scaffold00186.12 0.9084299357821491 85 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2, evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9083003224713079 87 AMTR_s00025p00140350 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00025.148 0.9082462217317775 88 AMTR_s00062p00074600 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.pPLA2-I-type phospholipase A2 evm_27.TU.AmTr_v1.0_scaffold00062.46 0.9082293615915321 89 AMTR_s00045p00142150 Secondary metabolism.terpenoids.mevalonate pathway.phosphomevalonate kinase evm_27.TU.AmTr_v1.0_scaffold00045.147 0.9082263372092536 90 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component EMB2016, evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9081201276011507 91 AMTR_s00078p00196690 evm_27.TU.AmTr_v1.0_scaffold00078.206 0.9080987244773683 92 AMTR_s00014p00249480 Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00014.129 0.9073382504077792 93 AMTR_s00004p00092300 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component evm_27.TU.AmTr_v1.0_scaffold00004.75 0.9073010643608054 94 AMTR_s00009p00202570 Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.130 0.9071457516350223 95 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.9070423414705541 96 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana MIRO1, emb2473, evm_27.TU.AmTr_v1.0_scaffold00003.6 0.906958780065611 97 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA2, KEA2, evm_27.TU.AmTr_v1.0_scaffold00009.318 0.9064042072147941 99