Sequence Description Alias PCC hrr AMTR_s00060p00174830 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component RP1, RPL3A, emb2207, ARP1, evm_27.TU.AmTr_v1.0_scaffold00060.112 0.9379771008867317 1 AMTR_s00004p00079950 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit evm_27.TU.AmTr_v1.0_scaffold00004.65 0.9336594305820534 10 AMTR_s00041p00084080 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPSa component P40, AP40, RPSAA, RP40, evm_27.TU.AmTr_v1.0_scaffold00041.50 0.9233395330999823 3 AMTR_s00049p00173980 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit evm_27.TU.AmTr_v1.0_scaffold00049.162 0.9192325733598233 20 AMTR_s00059p00214550 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP58 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00059.254 0.9149928858252114 5 AMTR_s00072p00080890 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component RPL10B, evm_27.TU.AmTr_v1.0_scaffold00072.35 0.9147667175632608 6 AMTR_s00002p00260990 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop58 snoRNP scaffold component evm_27.TU.AmTr_v1.0_scaffold00002.448 0.9142762071336014 7 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.9136994489147694 8 AMTR_s00011p00092240 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.PMD division factor evm_27.TU.AmTr_v1.0_scaffold00011.24 0.9116281661879364 9 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana PHB1, ATPHB1, evm_27.TU.AmTr_v1.0_scaffold00058.65 0.9112809517889677 10 AMTR_s00045p00160070 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00045.179 0.907884272083727 17 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.9068984806908759 12 AMTR_s00058p00176500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit evm_27.TU.AmTr_v1.0_scaffold00058.166 0.9068269222313131 29 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.9045934132090557 17 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9000976349683021 49 AMTR_s00066p00089800 Cell cycle.organelle machineries.DNA replication.single-stranded DNA (ssDNA) maintenance.SSB-type ssDNA-binding protein MTSSB, evm_27.TU.AmTr_v1.0_scaffold00066.70 0.8982702038386512 16 AMTR_s00068p00183630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL21 component NFD1, evm_27.TU.AmTr_v1.0_scaffold00068.143 0.8982335161429273 17 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.8951467846735889 40 AMTR_s00007p00244990 evm_27.TU.AmTr_v1.0_scaffold00007.262 0.892600823099082 19 AMTR_s00036p00225190 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component evm_27.TU.AmTr_v1.0_scaffold00036.165 0.8910604035504848 64 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase TRM10, AtTRM, evm_27.TU.AmTr_v1.0_scaffold00061.266 0.8902207339600419 21 AMTR_s00001p00102800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component evm_27.TU.AmTr_v1.0_scaffold00001.69 0.8900166215121698 22 AMTR_s00002p00269670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component RP1, RPL3A, emb2207, ARP1, evm_27.TU.AmTr_v1.0_scaffold00002.554 0.889613009855752 23 AMTR_s00009p00259890 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp protein ATPCNA1, PCNA1, evm_27.TU.AmTr_v1.0_scaffold00009.315 0.8892556565100856 24 AMTR_s00002p00247340 Chromatin organisation.histone chaperone activities.NAP-type histone chaperone NFA03, NFA3, NAP1;3, evm_27.TU.AmTr_v1.0_scaffold00002.335 0.8879907731157946 25 AMTR_s00003p00241820 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein HSP60, HSP60-3B, evm_27.TU.AmTr_v1.0_scaffold00003.261 0.887293883854531 27 AMTR_s00029p00111280 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13 component BBC1, RSU2, ATBBC1, evm_27.TU.AmTr_v1.0_scaffold00029.120 0.8846552834204764 27 AMTR_s00058p00122560 Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.84 0.8834590494234809 28 AMTR_s00049p00209260 evm_27.TU.AmTr_v1.0_scaffold00049.231 0.8813527908130105 29 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.8807553278847832 30 AMTR_s00009p00218020 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component FIB1, ATFIB1, ATFBR1, FBR1, SKIP7, evm_27.TU.AmTr_v1.0_scaffold00009.155 0.8797978707037456 31 AMTR_s00002p00271660 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component evm_27.TU.AmTr_v1.0_scaffold00002.635 0.8790595225119517 43 AMTR_s00078p00100600 Solute transport.porins.VDAC voltage-gated anion channel ATVDAC1, VDAC1, evm_27.TU.AmTr_v1.0_scaffold00078.71 0.8785283109296148 80 AMTR_s00010p00163740 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component ALY4, evm_27.TU.AmTr_v1.0_scaffold00010.126 0.8784204486007933 45 AMTR_s00077p00035710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component RPS6A, RPS6, evm_27.TU.AmTr_v1.0_scaffold00077.17 0.8780882817070607 35 AMTR_s00155p00043060 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase ATIMD2, IMD2, evm_27.TU.AmTr_v1.0_scaffold00155.21 0.877302846059124 75 AMTR_s00019p00217910 Solute transport.porins.VDAC voltage-gated anion channel ATVDAC4, VDAC4, evm_27.TU.AmTr_v1.0_scaffold00019.268 0.8748807577688561 38 AMTR_s00153p00030600 evm_27.TU.AmTr_v1.0_scaffold00153.10 0.873900679113734 39 AMTR_s00010p00083470 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase SYNC1 ARATH, SYNC1, EMB2755, evm_27.TU.AmTr_v1.0_scaffold00010.46 0.8731011616157252 41 AMTR_s00091p00096420 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC2-type golgin GC2, evm_27.TU.AmTr_v1.0_scaffold00091.36 0.8729951963565888 42 AMTR_s00011p00246950 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.147 0.871848300677771 43 AMTR_s00055p00155570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS8 component evm_27.TU.AmTr_v1.0_scaffold00055.72 0.8714315313801347 44 AMTR_s00343p00015240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18 component RPL18, evm_27.TU.AmTr_v1.0_scaffold00343.5 0.8706365375690985 46 AMTR_s00130p00044920 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase ATHSGBP, RABA1d, ATRABA1D, ATRAB11B, evm_27.TU.AmTr_v1.0_scaffold00130.16 0.8701235043350732 47 AMTR_s00068p00134210 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00068.92 0.8681862494399606 49 AMTR_s00029p00231170 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP0 component evm_27.TU.AmTr_v1.0_scaffold00029.368 0.8670120059270026 50 AMTR_s00017p00255870 SAL1 phosphatase OS=Arabidopsis thaliana FRY1, ATSAL1, ALX8, HOS2, SAL1, RON1, evm_27.TU.AmTr_v1.0_scaffold00017.281 0.8654493203237378 64 AMTR_s00171p00042920 Nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase DUT1, evm_27.TU.AmTr_v1.0_scaffold00171.19 0.8653520147381267 52 AMTR_s00153p00012840 Protein translocation.mitochondrion.outer mitochondrion membrane SAM insertion system.SAM/Tob55 component evm_27.TU.AmTr_v1.0_scaffold00153.1 0.8651303760271583 53 AMTR_s00103p00061650 evm_27.TU.AmTr_v1.0_scaffold00103.30 0.8650158782393831 54 AMTR_s00061p00211510 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00061.262 0.8636282362873057 56 AMTR_s00071p00151200 evm_27.TU.AmTr_v1.0_scaffold00071.137 0.863606925548686 57 AMTR_s00036p00184370 evm_27.TU.AmTr_v1.0_scaffold00036.95 0.8635927595495685 58 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.8631729434565498 67 AMTR_s00096p00039880 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor evm_27.TU.AmTr_v1.0_scaffold00096.17 0.8631004532339194 99 AMTR_s00082p00120830 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate phosphatase HISN7, IMPL2, evm_27.TU.AmTr_v1.0_scaffold00082.25 0.8618944830228696 62 AMTR_s00041p00058440 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS4 component evm_27.TU.AmTr_v1.0_scaffold00041.31 0.861850399182979 63 AMTR_s00025p00203150 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL11 component RPL16A, evm_27.TU.AmTr_v1.0_scaffold00025.260 0.8595964180157114 65 AMTR_s00177p00038700 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.15 0.8593893175886521 66 AMTR_s00078p00196190 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP50 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00078.205 0.8585936203416682 67 AMTR_s00041p00062460 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase ENO2, LOS2, evm_27.TU.AmTr_v1.0_scaffold00041.34 0.8584412358977437 68 AMTR_s00070p00137140 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase evm_27.TU.AmTr_v1.0_scaffold00070.75 0.8574402855746517 87 AMTR_s00002p00212950 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS2 component XW6, evm_27.TU.AmTr_v1.0_scaffold00002.224 0.8569011523790324 70 AMTR_s00002p00116290 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00002.71 0.8540028730261725 100 AMTR_s00056p00052520 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component STT3A, evm_27.TU.AmTr_v1.0_scaffold00056.33 0.8528140445957371 73 AMTR_s00006p00254180 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00006.176 0.8519133263965037 74 AMTR_s00089p00044750 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin HOS1, evm_27.TU.AmTr_v1.0_scaffold00089.13 0.851769617906519 75 AMTR_s00046p00091860 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.NST nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00046.48 0.8515460696625634 77 AMTR_s00006p00242700 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA1 assembly factor EDA13, EDA19, SWA1, evm_27.TU.AmTr_v1.0_scaffold00006.119 0.851483855626457 78 AMTR_s00005p00226680 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop56 snoRNP scaffold component NOP56, evm_27.TU.AmTr_v1.0_scaffold00005.101 0.8509357699623427 79 AMTR_s00102p00091820 evm_27.TU.AmTr_v1.0_scaffold00102.47 0.8506083261202316 86 AMTR_s00010p00232470 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI transamidase complex.PIG-T component evm_27.TU.AmTr_v1.0_scaffold00010.270 0.8495560696982001 82 AMTR_s00077p00121720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component EIF2, AteIF3f, eIF3F, evm_27.TU.AmTr_v1.0_scaffold00077.114 0.8493436426521265 83 AMTR_s00039p00195120 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana KV-BETA1, KAB1, evm_27.TU.AmTr_v1.0_scaffold00039.159 0.8482671903334071 84 AMTR_s00016p00168950 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor HSS, ARF1-BP, ARF2, ORE14, evm_27.TU.AmTr_v1.0_scaffold00016.128 0.8480869427141642 85 AMTR_s00037p00233460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00037.150 0.8472673106272602 88 AMTR_s00105p00023120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component evm_27.TU.AmTr_v1.0_scaffold00105.4 0.8460029004392816 90 AMTR_s00041p00068660 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst ATFKBP53, FKBP53, evm_27.TU.AmTr_v1.0_scaffold00041.38 0.8454739953721477 91 AMTR_s00067p00134010 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor evm_27.TU.AmTr_v1.0_scaffold00067.117 0.8448683159529334 92 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor EMB2271, evm_27.TU.AmTr_v1.0_scaffold00155.51 0.8446366955062945 94 AMTR_s00007p00238780 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA2 component ATRPA2, ATRPA32A, RPA2, ROR1, RPA32A, evm_27.TU.AmTr_v1.0_scaffold00007.248 0.8436819458712932 95 AMTR_s00109p00118420 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG1/NSN1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00109.117 0.8434660838575211 96 AMTR_s00135p00091990 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component RP1, RPL3A, emb2207, ARP1, evm_27.TU.AmTr_v1.0_scaffold00135.49 0.8422827742589475 98 AMTR_s00089p00047210 evm_27.TU.AmTr_v1.0_scaffold00089.14 0.8419617932223854 99