Sequence Description Alias PCC hrr AMTR_s00059p00076320 evm_27.TU.AmTr_v1.0_scaffold00059.51 0.9087542665389372 4 AMTR_s00140p00105610 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00140.51 0.8972886297661055 6 AMTR_s00002p00271280 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00002.619 0.8852544628005008 5 AMTR_s00166p00060690 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00166.36 0.8824824182047641 31 AMTR_s00017p00249180 evm_27.TU.AmTr_v1.0_scaffold00017.248 0.8749869881308324 9 AMTR_s00024p00238310 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana YLMG2, ATYLMG2, evm_27.TU.AmTr_v1.0_scaffold00024.270 0.8746819126244202 30 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB, evm_27.TU.AmTr_v1.0_scaffold00044.119 0.8689047452072567 79 AMTR_s00091p00081150 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00091.27 0.8678108666665793 72 AMTR_s00051p00142580 Uncharacterized protein At4g06744 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00051.54 0.8633952802879444 9 AMTR_s00002p00270990 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) CLH2, ATCLH2, evm_27.TU.AmTr_v1.0_scaffold00002.603 0.8617447872326651 33 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.853557287040196 86 AMTR_s00065p00176540 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase ALDH11A3, evm_27.TU.AmTr_v1.0_scaffold00065.146 0.8525251871861287 86 AMTR_s00007p00251190 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR6 CRR6, evm_27.TU.AmTr_v1.0_scaffold00007.284 0.8493696055094191 66 AMTR_s00015p00253000 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATSIG5, SIG5, SIGE, evm_27.TU.AmTr_v1.0_scaffold00015.107 0.8473526686452316 58 AMTR_s00052p00143130 evm_27.TU.AmTr_v1.0_scaffold00052.47 0.8436716046328744 17 AMTR_s00077p00180520 evm_27.TU.AmTr_v1.0_scaffold00077.203 0.8433093989284465 21 AMTR_s00039p00159460 evm_27.TU.AmTr_v1.0_scaffold00039.112 0.8398219435244006 66 AMTR_s00059p00056420 Phytohormones.brassinosteroid.synthesis.steroid 22-alpha-hydroxylase (DWF4) DWF4, SNP2, PSC1, CLM, SAV1, CYP90B1, evm_27.TU.AmTr_v1.0_scaffold00059.35 0.8394594381958395 24 AMTR_s00049p00221980 evm_27.TU.AmTr_v1.0_scaffold00049.262 0.838554937337278 40 AMTR_s00057p00205660 PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.245 0.8354556868528697 36 AMTR_s00001p00191590 Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.190 0.8344473124280254 45 AMTR_s00046p00093500 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ evm_27.TU.AmTr_v1.0_scaffold00046.51 0.8343980766267504 94 AMTR_s00007p00164520 evm_27.TU.AmTr_v1.0_scaffold00007.126 0.8324722398319303 31 AMTR_s00090p00154050 Redox homeostasis.chloroplast redox homeostasis.ferredoxin-dependent thioredoxin reductase (FTR) complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00090.85 0.8324218092165654 32 AMTR_s00019p00182630 Solute transport.channels.GLR ligand-gated cation channel GLR2.7, ATGLR2.7, evm_27.TU.AmTr_v1.0_scaffold00019.194 0.8261930196310994 36 AMTR_s00029p00235620 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP4 component PSRP4, evm_27.TU.AmTr_v1.0_scaffold00029.386 0.825154777014865 37 AMTR_s00053p00093890 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase AGT1, SGAT, AGT, evm_27.TU.AmTr_v1.0_scaffold00053.49 0.8247403033446015 38 AMTR_s00143p00079100 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT84B1, evm_27.TU.AmTr_v1.0_scaffold00143.18 0.824704865223756 48 AMTR_s00106p00037610 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.18 0.8237437363364689 97 AMTR_s00007p00216080 evm_27.TU.AmTr_v1.0_scaffold00007.201 0.8230732597752184 42 AMTR_s00149p00080400 Amino acid metabolism.degradation.branched-chain amino acid.enoyl-CoA hydratase CHY1, evm_27.TU.AmTr_v1.0_scaffold00149.64 0.8225375935398554 63 AMTR_s00066p00176700 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT74E2, evm_27.TU.AmTr_v1.0_scaffold00066.209 0.8208240354547074 54 AMTR_s00003p00079190 External stimuli response.temperature.temperature sensors.PHY-B temperature sensor protein HY3, OOP1, PHYB, evm_27.TU.AmTr_v1.0_scaffold00003.45 0.8191336115170501 69 AMTR_s00019p00182440 Solute transport.channels.GLR ligand-gated cation channel GLR2.8, ATGLR2.8, evm_27.TU.AmTr_v1.0_scaffold00019.193 0.8190518211683584 49 AMTR_s00009p00268850 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00009.433 0.8179012109162225 80 AMTR_s00001p00271570 Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00001.492 0.8114186161343704 55 AMTR_s00033p00171210 Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.118 0.8102340295025756 57 AMTR_s00009p00233140 evm_27.TU.AmTr_v1.0_scaffold00009.188 0.8094323330592769 85 AMTR_s00046p00173940 Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase evm_27.TU.AmTr_v1.0_scaffold00046.97 0.8093300453915897 70 AMTR_s00048p00195780 Solute transport.carrier-mediated transport.APC superfamily.DUR proton:urea symporter ATDUR3, DUR3, evm_27.TU.AmTr_v1.0_scaffold00048.159 0.8092994851792719 61 AMTR_s00078p00065110 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.BSD2 assembly factor evm_27.TU.AmTr_v1.0_scaffold00078.37 0.8067769046341442 64 AMTR_s00004p00073360 ECT2, evm_27.TU.AmTr_v1.0_scaffold00004.54 0.8018565833751495 68 AMTR_s00057p00046830 Acetate/butyrate--CoA ligase AAE7, peroxisomal OS=Arabidopsis thaliana ACN1, AAE7, evm_27.TU.AmTr_v1.0_scaffold00057.25 0.8010505825972658 69 AMTR_s00062p00146590 Purple acid phosphatase 18 OS=Arabidopsis thaliana PAP18, ATPAP18, evm_27.TU.AmTr_v1.0_scaffold00062.134 0.8003754782048524 71 AMTR_s00024p00110840 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00024.57 0.7991523697208183 74 AMTR_s00001p00270240 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO, evm_27.TU.AmTr_v1.0_scaffold00001.459 0.7988391765616879 75 AMTR_s00049p00210480 evm_27.TU.AmTr_v1.0_scaffold00049.235 0.7937966324832945 81 AMTR_s00068p00073260 evm_27.TU.AmTr_v1.0_scaffold00068.30 0.7937953247393167 82 AMTR_s00165p00029520 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT85A1, ATUGT85A1, evm_27.TU.AmTr_v1.0_scaffold00165.14 0.7912991332851379 95 AMTR_s00049p00201160 Solute transport.carrier-mediated transport.PHT2 phosphate transporter PHT2;1, ORF02, evm_27.TU.AmTr_v1.0_scaffold00049.215 0.7895092747295129 89 AMTR_s00037p00025630 Peroxidase 56 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00037.6 0.7876744943698796 94 AMTR_s00109p00148000 evm_27.TU.AmTr_v1.0_scaffold00109.161 0.7873321498869177 95