Sequence Description Alias PCC hrr AMTR_s00022p00234830 evm_27.TU.AmTr_v1.0_scaffold00022.325 0.9396435272921456 1 AMTR_s00001p00232760 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH5, VAR1, evm_27.TU.AmTr_v1.0_scaffold00001.249 0.9241189509397655 5 AMTR_s00010p00259290 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.PKS phototropin signalling factor PKS4, evm_27.TU.AmTr_v1.0_scaffold00010.421 0.9091528366042372 3 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB, evm_27.TU.AmTr_v1.0_scaffold00044.119 0.9050248748775276 23 AMTR_s00144p00086790 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00144.46 0.9026649983213372 5 AMTR_s00119p00030390 Protein NCA1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.14 0.9015874251099524 6 AMTR_s00152p00085890 Photosynthesis.photorespiration.hydroxypyruvate reductase HPR, ATHPR1, evm_27.TU.AmTr_v1.0_scaffold00152.29 0.8988201617093864 59 AMTR_s00017p00136990 Cellular respiration.glycolysis.plastidial glycolysis.fructose-1,6-bisphosphate aldolase FBA2, evm_27.TU.AmTr_v1.0_scaffold00017.60 0.8960445965578375 38 AMTR_s00147p00070270 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor CHUP1, evm_27.TU.AmTr_v1.0_scaffold00147.32 0.8950300838765826 11 AMTR_s00009p00268340 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00009.422 0.8943701466377402 14 AMTR_s00044p00107090 Cytoskeleton.cp-actin-dependent plastid movement.PMI1/PMI15 cp-actin stability factor PMI1, evm_27.TU.AmTr_v1.0_scaffold00044.78 0.8921294908371286 11 AMTR_s00067p00206610 evm_27.TU.AmTr_v1.0_scaffold00067.230 0.8919578792176788 15 AMTR_s00170p00069910 evm_27.TU.AmTr_v1.0_scaffold00170.33 0.8916233408195807 13 AMTR_s00008p00068860 Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica ATCML9, CAM9, CML9, evm_27.TU.AmTr_v1.0_scaffold00008.23 0.8908832592625245 14 AMTR_s00012p00255830 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase RCA, evm_27.TU.AmTr_v1.0_scaffold00012.292 0.889452915818477 48 AMTR_s00057p00165650 evm_27.TU.AmTr_v1.0_scaffold00057.165 0.8886218672625991 17 AMTR_s00106p00108310 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component VAR2, FTSH2, evm_27.TU.AmTr_v1.0_scaffold00106.79 0.8886174513265663 56 AMTR_s00009p00233000 evm_27.TU.AmTr_v1.0_scaffold00009.187 0.8862366939910544 49 AMTR_s00016p00251680 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPA-1, GAPA, evm_27.TU.AmTr_v1.0_scaffold00016.302 0.885010791055013 73 AMTR_s00012p00254100 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.273 0.8847702201100134 50 AMTR_s00071p00016000 Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin ATHM2, evm_27.TU.AmTr_v1.0_scaffold00071.5 0.8823964500174659 68 AMTR_s00076p00039590 Phytohormones.abscisic acid.synthesis.ABA1 zeaxanthin epoxidase ABA1, IBS3, ATABA1, ZEP, NPQ2, LOS6, ATZEP, evm_27.TU.AmTr_v1.0_scaffold00076.7 0.882024482348284 39 AMTR_s00024p00248370 evm_27.TU.AmTr_v1.0_scaffold00024.319 0.8813427482453318 49 AMTR_s00058p00047610 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00058.18 0.8805994782739539 32 AMTR_s00059p00164750 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH2, SAW1, evm_27.TU.AmTr_v1.0_scaffold00059.154 0.8798337742659023 31 AMTR_s00091p00081150 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00091.27 0.8797813211482994 54 AMTR_s00045p00141060 External stimuli response.light.red/far red light.PIF transcriptional regulator PIF3, POC1, PAP3, evm_27.TU.AmTr_v1.0_scaffold00045.145 0.8795051197262863 28 AMTR_s00066p00176700 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT74E2, evm_27.TU.AmTr_v1.0_scaffold00066.209 0.8790540224938722 29 AMTR_s00007p00257360 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN7, evm_27.TU.AmTr_v1.0_scaffold00007.307 0.8787715770592152 30 AMTR_s00019p00118960 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic55 component TIC55-II, evm_27.TU.AmTr_v1.0_scaffold00019.95 0.8780862426526256 31 AMTR_s00040p00037300 Solute transport.carrier-mediated transport.DMT superfamily.UmamiT-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00040.17 0.8774632385448972 32 AMTR_s00126p00110160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.PMH RNA helicase PMH2, ATRH53, evm_27.TU.AmTr_v1.0_scaffold00126.53 0.8765512847574896 42 AMTR_s00153p00069260 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.36 0.8765231579857115 34 AMTR_s00001p00262320 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH2, SAW1, evm_27.TU.AmTr_v1.0_scaffold00001.384 0.875988560689983 35 AMTR_s00032p00218900 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP76C2, evm_27.TU.AmTr_v1.0_scaffold00032.219 0.8751038867675773 36 AMTR_s00099p00157080 Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase ATFRO6, FRO6, evm_27.TU.AmTr_v1.0_scaffold00099.153 0.8739472134908953 37 AMTR_s00077p00172700 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhN component evm_27.TU.AmTr_v1.0_scaffold00077.191 0.8731359559489997 62 AMTR_s00021p00200120 evm_27.TU.AmTr_v1.0_scaffold00021.166 0.871685949707311 85 AMTR_s00061p00053670 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease evm_27.TU.AmTr_v1.0_scaffold00061.31 0.8713713010861525 40 AMTR_s00010p00131320 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhL component CRR23, evm_27.TU.AmTr_v1.0_scaffold00010.88 0.8706951024344982 81 AMTR_s00065p00176540 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase ALDH11A3, evm_27.TU.AmTr_v1.0_scaffold00065.146 0.8697803782849661 55 AMTR_s00029p00223030 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2, evm_27.TU.AmTr_v1.0_scaffold00029.342 0.8690649279509562 61 AMTR_s00181p00023870 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71A25, evm_27.TU.AmTr_v1.0_scaffold00181.11 0.8682071538863065 44 AMTR_s00001p00022550 Redox homeostasis.enzymatic reactive oxygen species scavengers.catalase CAT2, evm_27.TU.AmTr_v1.0_scaffold00001.7 0.8680710594601236 45 AMTR_s00016p00087320 evm_27.TU.AmTr_v1.0_scaffold00016.49 0.8656127241967504 47 AMTR_s00030p00231690 evm_27.TU.AmTr_v1.0_scaffold00030.187 0.8649805271162992 54 AMTR_s00017p00154940 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein NPQ4, PSBS, evm_27.TU.AmTr_v1.0_scaffold00017.71 0.8649504916323172 50 AMTR_s00030p00246840 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate degradation.nitrilase NIT4, AtNIT4, evm_27.TU.AmTr_v1.0_scaffold00030.227 0.8643060492263098 51 AMTR_s00165p00028990 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.13 0.863816358449244 52 AMTR_s00149p00031690 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor ATSCO1/CPEF-G, SCO1, ATSCO1, evm_27.TU.AmTr_v1.0_scaffold00149.10 0.8623501134556552 54 AMTR_s00064p00107710 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor GATA22, CGA1, GNL, evm_27.TU.AmTr_v1.0_scaffold00064.40 0.8613787907417905 62 AMTR_s00039p00159460 evm_27.TU.AmTr_v1.0_scaffold00039.112 0.8611779896647874 57 AMTR_s00001p00262360 evm_27.TU.AmTr_v1.0_scaffold00001.385 0.8610666345511236 58 AMTR_s00002p00249920 Jacalin-related lectin 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.350 0.8599108732875663 59 AMTR_s00012p00254790 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.281 0.8595366276038203 60 AMTR_s00009p00163120 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00009.90 0.8585426803896913 61 AMTR_s00032p00089190 evm_27.TU.AmTr_v1.0_scaffold00032.54 0.8584144591454993 62 AMTR_s00046p00093500 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ evm_27.TU.AmTr_v1.0_scaffold00046.51 0.85837146788365 63 AMTR_s00058p00191040 Carbonic anhydrase, chloroplastic OS=Spinacia oleracea CA18, CA2, BETA CA2, evm_27.TU.AmTr_v1.0_scaffold00058.190 0.8581160959943174 65 AMTR_s00059p00164710 evm_27.TU.AmTr_v1.0_scaffold00059.153 0.857830769481655 66 AMTR_s00067p00091510 Probable F-box protein At4g22030 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.68 0.8557380318430293 68 AMTR_s00135p00100890 Solute transport.carrier-mediated transport.DMT superfamily.PUP organic cation transporter PUP1, ATPUP1, evm_27.TU.AmTr_v1.0_scaffold00135.58 0.8550627110738279 69 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.8541169410277051 84 AMTR_s00062p00151050 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP716A1, evm_27.TU.AmTr_v1.0_scaffold00062.139 0.8540731355893848 72 AMTR_s00056p00198260 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00056.182 0.8535880438327234 73 AMTR_s00013p00262850 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP72A15, evm_27.TU.AmTr_v1.0_scaffold00013.282 0.8530581624536191 74 AMTR_s00171p00052300 Solute transport.carrier-mediated transport.DMT superfamily.UmamiT-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00171.33 0.8529941084511757 75 AMTR_s00010p00247660 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5, evm_27.TU.AmTr_v1.0_scaffold00010.339 0.85251905221592 76 AMTR_s00092p00098850 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00092.56 0.8517979492030116 80 AMTR_s00047p00149040 Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana AAE1, evm_27.TU.AmTr_v1.0_scaffold00047.69 0.8513824684002423 78 AMTR_s00002p00263020 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase SD2-5, evm_27.TU.AmTr_v1.0_scaffold00002.472 0.8503679506367368 81 AMTR_s00002p00270990 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) CLH2, ATCLH2, evm_27.TU.AmTr_v1.0_scaffold00002.603 0.8498002746445072 82 AMTR_s00006p00263760 Disease resistance protein RPM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.255 0.84924703335421 83 AMTR_s00181p00022280 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP71A26, evm_27.TU.AmTr_v1.0_scaffold00181.8 0.849199106354237 84 AMTR_s00037p00168570 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma ATPC1, evm_27.TU.AmTr_v1.0_scaffold00037.79 0.8478457432610409 88 AMTR_s00012p00254470 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.276 0.8471984392393147 89 AMTR_s00038p00182380 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CRY cryptochrome photoreceptor HY4, ATCRY1, BLU1, OOP2, CRY1, evm_27.TU.AmTr_v1.0_scaffold00038.124 0.8468238170963646 90 AMTR_s00006p00263750 Disease resistance protein RPM1 OS=Arabidopsis thaliana HRT, RCY1, RPP8, evm_27.TU.AmTr_v1.0_scaffold00006.254 0.8461414454282493 91 AMTR_s00021p00222530 Cellulose synthase-like protein G3 OS=Arabidopsis thaliana ATCSLG3, CSLG3, evm_27.TU.AmTr_v1.0_scaffold00021.213 0.8461314193027246 92 AMTR_s00043p00100060 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-1 kinase CRK25, evm_27.TU.AmTr_v1.0_scaffold00043.14 0.8448224284617208 96 AMTR_s00065p00103530 evm_27.TU.AmTr_v1.0_scaffold00065.57 0.8432421575636977 97 AMTR_s00022p00142650 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.137 0.8413697001770305 100