Sequence Description Alias PCC hrr AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.9424406010290031 1 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9407010722975936 8 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2, evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9276894624705068 30 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4, evm_27.TU.AmTr_v1.0_scaffold00007.52 0.92638620227963 38 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9256060154449072 52 AMTR_s00140p00082700 evm_27.TU.AmTr_v1.0_scaffold00140.38 0.9252382810098037 8 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 NRPA1, evm_27.TU.AmTr_v1.0_scaffold00022.362 0.9232316572926876 12 AMTR_s00104p00047630 Disease resistance protein RPS2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.12 0.9218989453719799 17 AMTR_s00022p00244130 Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana OEP80, EMB213, TOC75, ATOEP80, evm_27.TU.AmTr_v1.0_scaffold00022.358 0.9215921863464746 68 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor SPL1, evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9207085596392326 46 AMTR_s00110p00073830 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase ESP3, EMB2733, evm_27.TU.AmTr_v1.0_scaffold00110.39 0.9199739612376334 52 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2, evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9195333178215285 39 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9189578330900527 26 AMTR_s00078p00055040 RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase SDE1, RDR6, SGS2, evm_27.TU.AmTr_v1.0_scaffold00078.28 0.9175683348230275 14 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9170435515722243 38 AMTR_s00044p00033620 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Etl1 chromatin remodeling factor CHA19, CHR19, ETL1, evm_27.TU.AmTr_v1.0_scaffold00044.10 0.9167880758536321 20 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9162942279558087 55 AMTR_s00004p00261460 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.256 0.9157457523046932 43 AMTR_s00016p00110380 evm_27.TU.AmTr_v1.0_scaffold00016.72 0.9156753973803891 19 AMTR_s00013p00056780 MEI1, evm_27.TU.AmTr_v1.0_scaffold00013.20 0.9154632694014282 75 AMTR_s00067p00089960 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.66 0.9148988989238804 21 AMTR_s00027p00053690 DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana UVR7, ERCC1, evm_27.TU.AmTr_v1.0_scaffold00027.8 0.9146849440323599 25 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor AHK2, HK2, evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9143625969377995 45 AMTR_s00080p00131040 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase HERK1, evm_27.TU.AmTr_v1.0_scaffold00080.56 0.9136746846774079 24 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component ATTIF3A1, ATEIF3A-1, EIF3A-1, TIF3A1, EIF3A, evm_27.TU.AmTr_v1.0_scaffold00111.21 0.9131856387385918 26 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.9129150227498496 26 AMTR_s00061p00196410 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond LACS8, evm_27.TU.AmTr_v1.0_scaffold00061.230 0.911270998854141 32 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.9111421741476982 28 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2, evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9109957708079885 35 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9109367441915985 38 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9105049715465645 69 AMTR_s00029p00058780 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.53 0.9088458743318418 34 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9075298145615167 80 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.907440628618435 58 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2, evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9065591016989912 90 AMTR_s00110p00146400 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.121 0.9060604577791194 75 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component ATRAD21.3, SYN4, evm_27.TU.AmTr_v1.0_scaffold00066.206 0.9059158021459336 39 AMTR_s00006p00250940 O-fucosyltransferase 27 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.152 0.9046998736745592 47 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9043759856159415 98 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.9036143401206067 44 AMTR_s00071p00123130 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00071.99 0.9033408468429305 45 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.9032524689716994 46 AMTR_s00049p00137690 evm_27.TU.AmTr_v1.0_scaffold00049.118 0.9031507539356861 47 AMTR_s00010p00125180 Putative metallophosphoesterase At3g03305 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.82 0.902198704656902 59 AMTR_s00091p00037050 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase evm_27.TU.AmTr_v1.0_scaffold00091.6 0.9011252575785887 53 AMTR_s00017p00141460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00017.65 0.9006648045198331 77 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9005887145260058 97 AMTR_s00069p00119460 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana SLK2, evm_27.TU.AmTr_v1.0_scaffold00069.80 0.8998634504556049 96 AMTR_s00039p00209870 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKR1, CHR4, evm_27.TU.AmTr_v1.0_scaffold00039.178 0.8970296397165083 60 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component TOR, evm_27.TU.AmTr_v1.0_scaffold00060.9 0.8969811293111691 89 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16, evm_27.TU.AmTr_v1.0_scaffold00682.1 0.8961950971359719 67 AMTR_s00007p00148280 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC1 component EMB2771, evm_27.TU.AmTr_v1.0_scaffold00007.111 0.8956926610079111 64 AMTR_s00001p00158780 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase CPK21, evm_27.TU.AmTr_v1.0_scaffold00001.145 0.8952752097706232 66 AMTR_s00009p00114640 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor ELF6, evm_27.TU.AmTr_v1.0_scaffold00009.56 0.8952104501285272 68 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.8951280863227868 95 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.8949479920363546 71 AMTR_s00182p00016710 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3, evm_27.TU.AmTr_v1.0_scaffold00182.5 0.8947896730226377 72 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00006.192 0.8944613529050774 100 AMTR_s00148p00061600 Phytohormones.ethylene.perception and signal transduction.EIN2-type signal transducer ATEIN2, PIR2, EIN2, ERA3, ORE3, CKR1, ORE2, evm_27.TU.AmTr_v1.0_scaffold00148.35 0.8933579551740867 76 AMTR_s00091p00075810 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00091.25 0.89278039706948 79 AMTR_s00061p00084390 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component evm_27.TU.AmTr_v1.0_scaffold00061.60 0.8925736159901932 81 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.8921633307361945 90 AMTR_s00111p00079300 evm_27.TU.AmTr_v1.0_scaffold00111.51 0.8914015201776122 85 AMTR_s00099p00149450 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.S-methylmethionine cycle.methionine S-methyltransferase MMT, evm_27.TU.AmTr_v1.0_scaffold00099.136 0.8911984476339476 86 AMTR_s00137p00010410 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade I phosphatase evm_27.TU.AmTr_v1.0_scaffold00137.1 0.891167132944055 87 AMTR_s00045p00114550 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM3-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00045.110 0.8907304638153773 92 AMTR_s00099p00102890 Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.84 0.890694746543175 93 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.8893251379079765 99 AMTR_s00033p00116200 KH domain-containing protein HEN4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.57 0.8887614741247498 100