Sequence Description Alias PCC hrr AMTR_s00001p00048980 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme SBE2.2, evm_27.TU.AmTr_v1.0_scaffold00001.28 0.9154391226210141 3 AMTR_s00045p00158000 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ROC4, evm_27.TU.AmTr_v1.0_scaffold00045.174 0.9053664966872282 3 AMTR_s00117p00072000 Lipid metabolism.fatty acid synthesis.fatty acid chain termination.oleoyl-ACP thioesterase evm_27.TU.AmTr_v1.0_scaffold00117.19 0.9050713773912976 7 AMTR_s00003p00152830 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL2, evm_27.TU.AmTr_v1.0_scaffold00003.126 0.8937285661687511 8 AMTR_s00085p00019560 Enzyme classification.EC_2 transferases.EC_2.2 transferase transferring aldehyde or ketonic group evm_27.TU.AmTr_v1.0_scaffold00085.3 0.8889489459179569 39 AMTR_s00148p00044300 Carbohydrate metabolism.mannose metabolism.phosphomannomutase evm_27.TU.AmTr_v1.0_scaffold00148.23 0.8884852106362836 8 AMTR_s00101p00077050 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit CAC2, evm_27.TU.AmTr_v1.0_scaffold00101.55 0.8881291547756125 14 AMTR_s00033p00183310 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component PTAC17, evm_27.TU.AmTr_v1.0_scaffold00033.135 0.8877934628158396 12 AMTR_s00010p00201890 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) evm_27.TU.AmTr_v1.0_scaffold00010.193 0.8874853840889677 12 AMTR_s00086p00110220 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase SPS1, evm_27.TU.AmTr_v1.0_scaffold00086.58 0.8826034486688616 21 AMTR_s00061p00061380 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.36 0.8825611877401675 11 AMTR_s00029p00159160 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.190 0.8782245458555155 13 AMTR_s00048p00123660 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana SKL2, evm_27.TU.AmTr_v1.0_scaffold00048.67 0.8767070300947063 15 AMTR_s00033p00236040 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate lyase evm_27.TU.AmTr_v1.0_scaffold00033.238 0.8735457614131212 14 AMTR_s00058p00104170 Cell cycle.organelle machineries.organelle fission.plastid division.MinE FtsZ assembly factor MINE1, ATMINE1, ARC12, evm_27.TU.AmTr_v1.0_scaffold00058.58 0.8716864279581202 60 AMTR_s00089p00065300 Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00089.24 0.8715699908559105 16 AMTR_s00049p00153870 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP716A1, evm_27.TU.AmTr_v1.0_scaffold00049.137 0.8681880006232902 17 AMTR_s00081p00029310 Protein modification.hydroxylation.prolyl hydroxylase evm_27.TU.AmTr_v1.0_scaffold00081.13 0.8680432258280659 20 AMTR_s00032p00157410 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.ornithine.N2-acetylornithine aminotransferase WIN1, evm_27.TU.AmTr_v1.0_scaffold00032.126 0.8665808304666507 19 AMTR_s00002p00270350 Solute transport.carrier-mediated transport.MFS superfamily.NTT ATP:ADP antiporter ATNTT2, evm_27.TU.AmTr_v1.0_scaffold00002.579 0.8665767842383174 23 AMTR_s00163p00066960 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxyl carrier subunit BCCP1, CAC1-A, BCCP, CAC1A, BCCP-1, CAC1, evm_27.TU.AmTr_v1.0_scaffold00163.26 0.8546693081422105 21 AMTR_s00007p00267680 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp20 Hsp60-co-chaperone CPN21, ATCPN21, CHCPN10, CPN10, CPN20, evm_27.TU.AmTr_v1.0_scaffold00007.383 0.8526684349533865 30 AMTR_s00001p00138080 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana EMB16, EMB2036, AKRP, evm_27.TU.AmTr_v1.0_scaffold00001.114 0.847815795811935 45 AMTR_s00022p00059330 evm_27.TU.AmTr_v1.0_scaffold00022.37 0.8449890874548777 25 AMTR_s00024p00151670 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase GAD, GAD1, evm_27.TU.AmTr_v1.0_scaffold00024.104 0.8425058850059279 26 AMTR_s00075p00184090 evm_27.TU.AmTr_v1.0_scaffold00075.60 0.8417673096608015 28 AMTR_s00030p00124490 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-B component ATNAP1, ATABC1, ABC1, LAF6, evm_27.TU.AmTr_v1.0_scaffold00030.74 0.8406687595316598 41 AMTR_s00039p00163600 Solute transport.carrier-mediated transport.MFS superfamily.BT1 small solute transporter evm_27.TU.AmTr_v1.0_scaffold00039.119 0.8403708579832949 30 AMTR_s00045p00181910 Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.223 0.8390638978788113 31 AMTR_s00077p00122240 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00077.115 0.8385355437941048 44 AMTR_s00017p00177990 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond LACS9, evm_27.TU.AmTr_v1.0_scaffold00017.91 0.8381269878032245 33 AMTR_s00012p00255880 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (VGT-type) evm_27.TU.AmTr_v1.0_scaffold00012.293 0.8367885544823382 34 AMTR_s00003p00032960 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E3 dihydrolipoamide dehydrogenase component evm_27.TU.AmTr_v1.0_scaffold00003.16 0.8318757829005744 38 AMTR_s00061p00198380 Coenzyme metabolism.coenzyme A synthesis.pantothenate synthesis.ketopantoate hydroxymethyltransferase KPHMT1, PANB1, evm_27.TU.AmTr_v1.0_scaffold00061.236 0.8309821804919997 39 AMTR_s00066p00091160 MLO-like protein 1 OS=Arabidopsis thaliana MLO1, ATMLO1, evm_27.TU.AmTr_v1.0_scaffold00066.72 0.8274481167393335 40 AMTR_s00067p00140990 Uncharacterized protein At4g13200, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.129 0.8230343319210641 43 AMTR_s00002p00107590 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component LTA2, PLE2, evm_27.TU.AmTr_v1.0_scaffold00002.65 0.8211130310816226 44 AMTR_s00019p00233430 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.homogentisate phytyltransferase (VTE2/HPT) HPT1, ATHPT, TPT1, VTE2, evm_27.TU.AmTr_v1.0_scaffold00019.323 0.8202767608672253 64 AMTR_s00049p00190450 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) evm_27.TU.AmTr_v1.0_scaffold00049.198 0.820002847103343 88 AMTR_s00003p00191990 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate isomerase.small subunit evm_27.TU.AmTr_v1.0_scaffold00003.169 0.8181793331189497 48 AMTR_s00029p00107920 evm_27.TU.AmTr_v1.0_scaffold00029.111 0.8147796462528455 83 AMTR_s00022p00178480 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class tau ATGSTU17, GST30, ERD9, GST30B, evm_27.TU.AmTr_v1.0_scaffold00022.188 0.8146208559470179 99 AMTR_s00009p00258320 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase alpha subunit CAC3, evm_27.TU.AmTr_v1.0_scaffold00009.300 0.8122057496834928 54 AMTR_s00057p00160950 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.149 0.8108453858952072 82 AMTR_s00009p00080200 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CH-CPN60A, CPN60A, SLP, evm_27.TU.AmTr_v1.0_scaffold00009.27 0.8084027544375163 62 AMTR_s00129p00112550 RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor ERF72, EBP, ATEBP, RAP2.3, evm_27.TU.AmTr_v1.0_scaffold00129.86 0.8004071497474181 72 AMTR_s00147p00032390 U-box domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00147.11 0.7990182473872575 76 AMTR_s00109p00036750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component NYC1, evm_27.TU.AmTr_v1.0_scaffold00109.25 0.795674648895249 81 AMTR_s00165p00024090 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.8 0.7940243316764042 82 AMTR_s00078p00038790 evm_27.TU.AmTr_v1.0_scaffold00078.16 0.7934430334375719 84 AMTR_s00029p00229910 evm_27.TU.AmTr_v1.0_scaffold00029.363 0.7933899018437873 85 AMTR_s00129p00074780 Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase PME61, evm_27.TU.AmTr_v1.0_scaffold00129.47 0.7930317523833691 86 AMTR_s00039p00230320 evm_27.TU.AmTr_v1.0_scaffold00039.216 0.7926473853485705 90 AMTR_s00048p00200110 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.165 0.7917825516603663 89 AMTR_s00002p00254680 GATA22, CGA1, GNL, evm_27.TU.AmTr_v1.0_scaffold00002.386 0.7897930406604582 92 AMTR_s00122p00119310 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter ABCG40, PDR12, ATABCG40, ATPDR12, evm_27.TU.AmTr_v1.0_scaffold00122.55 0.7875306094362937 96 AMTR_s00006p00255390 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.AAAP-type transporter evm_27.TU.AmTr_v1.0_scaffold00006.186 0.7849911550641405 99