Sequence Description Alias PCC hrr AMTR_s00153p00060550 Probable methyltransferase PMT23 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.27 0.9402700741738483 3 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9396484802414058 31 AMTR_s00024p00216120 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP7 assembly factor evm_27.TU.AmTr_v1.0_scaffold00024.201 0.9382869081127547 3 AMTR_s00016p00071200 evm_27.TU.AmTr_v1.0_scaffold00016.35 0.9375105476102263 4 AMTR_s00045p00068210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component evm_27.TU.AmTr_v1.0_scaffold00045.55 0.9340252030948757 97 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease TRZ4, evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9317712468542606 38 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323, evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9299239412268919 30 AMTR_s00027p00053690 DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana UVR7, ERCC1, evm_27.TU.AmTr_v1.0_scaffold00027.8 0.9292858394595808 9 AMTR_s00036p00036310 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00036.9 0.9289380374436674 9 AMTR_s00010p00163020 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) RAD4, ATRAD4, evm_27.TU.AmTr_v1.0_scaffold00010.125 0.9276965119249341 10 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase SEC, evm_27.TU.AmTr_v1.0_scaffold00013.214 0.927426507684775 46 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9272115032833241 53 AMTR_s00039p00209870 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKR1, CHR4, evm_27.TU.AmTr_v1.0_scaffold00039.178 0.9266975554535299 13 AMTR_s00059p00168200 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00059.161 0.9264865124713314 14 AMTR_s00030p00083820 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1, evm_27.TU.AmTr_v1.0_scaffold00030.33 0.9263650287067235 38 AMTR_s00061p00073040 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.48 0.9263215035879917 17 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor SPL1, evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9258822712314732 27 AMTR_s00069p00133460 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1, evm_27.TU.AmTr_v1.0_scaffold00069.97 0.9248563459090121 18 AMTR_s00016p00180540 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00016.142 0.9245940196580135 70 AMTR_s00004p00159650 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.171 0.9242808826016271 20 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9235246566268057 93 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase IBR3, evm_27.TU.AmTr_v1.0_scaffold00003.89 0.923155582708423 40 AMTR_s00057p00025530 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00057.9 0.9217880807875443 24 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9215254944495763 32 AMTR_s00106p00098180 evm_27.TU.AmTr_v1.0_scaffold00106.68 0.9214374807800384 82 AMTR_s00147p00073200 evm_27.TU.AmTr_v1.0_scaffold00147.35 0.9208307966482523 29 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9207606328175153 56 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9202683287607272 43 AMTR_s00029p00121120 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein AGD2, evm_27.TU.AmTr_v1.0_scaffold00029.135 0.9202426459830529 32 AMTR_s00058p00123890 evm_27.TU.AmTr_v1.0_scaffold00058.86 0.9191284295195511 33 AMTR_s00021p00196170 evm_27.TU.AmTr_v1.0_scaffold00021.158 0.9183483066319014 34 AMTR_s00036p00205320 Protein degradation.peptidase families.metallopeptidase activities.M16 families.PQQL-like peptidase evm_27.TU.AmTr_v1.0_scaffold00036.122 0.917687271224773 35 AMTR_s00039p00226980 PRP39, evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9174701544880879 52 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9172901206506348 40 AMTR_s00045p00060470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.PLANTKAP transport karyopherin evm_27.TU.AmTr_v1.0_scaffold00045.44 0.9162239281279894 38 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) ATPARP2, PARP2, evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9160787096884505 68 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9158795652032732 84 AMTR_s00110p00155630 evm_27.TU.AmTr_v1.0_scaffold00110.131 0.9158383405721408 41 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana AAE18, evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9154018623545468 71 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.9151368527821571 79 AMTR_s00002p00215720 evm_27.TU.AmTr_v1.0_scaffold00002.229 0.9142214068067732 45 AMTR_s00210p00017530 Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00210.3 0.9139980004710696 46 AMTR_s00036p00170130 Nudix hydrolase 3 OS=Arabidopsis thaliana atnudt3, NUDT3, evm_27.TU.AmTr_v1.0_scaffold00036.84 0.9138268985950027 47 AMTR_s00003p00269470 evm_27.TU.AmTr_v1.0_scaffold00003.408 0.9136597395370437 48 AMTR_s00046p00229830 External stimuli response.salinity.SOS (Salt Overly Sensitive) signalling pathway.SOS3-SOS2 signalling.SOS2 kinase ATCIPK8, CIPK8, PKS11, SnRK3.13, evm_27.TU.AmTr_v1.0_scaffold00046.173 0.9134548759530702 50 AMTR_s00060p00170530 evm_27.TU.AmTr_v1.0_scaffold00060.107 0.9128573632382612 52 AMTR_s00059p00138250 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG7 ATG8/12-activating E1 protein ATAPG7, APG7, ATG7, ATATG7, evm_27.TU.AmTr_v1.0_scaffold00059.120 0.9127567655227867 53 AMTR_s00109p00150460 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.1-deoxy-d-xylulose 5-phosphate import.D-xylulose kinase XK-2, XK2, evm_27.TU.AmTr_v1.0_scaffold00109.167 0.9122816372824649 54 AMTR_s02210p00008540 AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02210.1 0.912150459022318 69 AMTR_s00022p00020890 evm_27.TU.AmTr_v1.0_scaffold00022.6 0.9119902623888476 56 AMTR_s00009p00202570 Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.130 0.9117866489010631 58 AMTR_s00007p00266810 DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.378 0.9114513205026886 59 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9111695341112985 66 AMTR_s00045p00084300 evm_27.TU.AmTr_v1.0_scaffold00045.75 0.9106078282961294 61 AMTR_s00225p00019510 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein TAN, EMB2757, evm_27.TU.AmTr_v1.0_scaffold00225.2 0.9104779944387783 62 AMTR_s00033p00216940 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter CLT2, evm_27.TU.AmTr_v1.0_scaffold00033.192 0.9104470149015361 68 AMTR_s00002p00258740 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.427 0.9101550192122381 64 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.909439209872382 67 AMTR_s00063p00142620 evm_27.TU.AmTr_v1.0_scaffold00063.36 0.908658752929518 69 AMTR_s00066p00163770 ELF9, evm_27.TU.AmTr_v1.0_scaffold00066.177 0.9085718280461762 70 AMTR_s00002p00043100 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG6 component evm_27.TU.AmTr_v1.0_scaffold00002.17 0.9085292039828673 71 AMTR_s00070p00097310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase CBL, evm_27.TU.AmTr_v1.0_scaffold00070.48 0.9085047016307597 72 AMTR_s00077p00055540 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana CAD1, evm_27.TU.AmTr_v1.0_scaffold00077.32 0.908462998744967 73 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana MIRO1, emb2473, evm_27.TU.AmTr_v1.0_scaffold00003.6 0.9083343730957537 83 AMTR_s00040p00229490 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.myotubularin lipid phosphatase AtMTM1, MTM1, evm_27.TU.AmTr_v1.0_scaffold00040.275 0.9081593818834374 76 AMTR_s00040p00191090 Dynein regulatory complex subunit 7 (Fragment) OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.189 0.9075880702158785 78 AMTR_s00017p00141460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00017.65 0.907200861958041 80 AMTR_s00009p00244590 evm_27.TU.AmTr_v1.0_scaffold00009.231 0.9070129064596596 81 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9064494401513958 84 AMTR_s00109p00116730 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.adrenodoxin oxidoreductase component evm_27.TU.AmTr_v1.0_scaffold00109.115 0.9062283442787581 85 AMTR_s00101p00130320 Cytoskeleton.microfilament network.actin organisation.SCAB regulator protein evm_27.TU.AmTr_v1.0_scaffold00101.104 0.9059385731291524 88 AMTR_s00045p00073910 Cell wall.hemicellulose.heteromannan.synthesis.mannan synthesis accessory protein evm_27.TU.AmTr_v1.0_scaffold00045.63 0.9058300633125662 88 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.9056505801466516 89 AMTR_s00025p00208510 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN13 regulatory component RPN13, evm_27.TU.AmTr_v1.0_scaffold00025.272 0.9052467212325427 92 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana NSL1, evm_27.TU.AmTr_v1.0_scaffold00068.151 0.9051176815180982 93 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.9040351015231836 96 AMTR_s00023p00208940 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY4, evm_27.TU.AmTr_v1.0_scaffold00023.152 0.9037535305846126 97 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme NAD-ME1, evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9033440181410342 100