Sequence Description Alias PCC hrr AMTR_s00025p00200390 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase HEN2, evm_27.TU.AmTr_v1.0_scaffold00025.254 0.9405268509924755 33 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component ATTAF6, TAF6, TAFII59, evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9371344109575344 15 AMTR_s00006p00149820 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC4 component ATORC4, ORC4, evm_27.TU.AmTr_v1.0_scaffold00006.57 0.9362668892478154 13 AMTR_s00001p00260080 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a (SPO11) SPO11-2, evm_27.TU.AmTr_v1.0_scaffold00001.369 0.9351720375434097 4 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.93130426489307 26 AMTR_s00111p00067270 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00111.37 0.9275285114322619 27 AMTR_s02210p00008540 AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02210.1 0.9254003100732362 29 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9247556914939553 19 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase SEC, evm_27.TU.AmTr_v1.0_scaffold00013.214 0.9239151797013394 63 AMTR_s00027p00246570 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana GFA2, evm_27.TU.AmTr_v1.0_scaffold00027.154 0.9229825648596779 11 AMTR_s00025p00060820 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB activating E1 complex.large component (ECR1) ECR1, evm_27.TU.AmTr_v1.0_scaffold00025.39 0.9228103098759343 12 AMTR_s00041p00141370 evm_27.TU.AmTr_v1.0_scaffold00041.101 0.9210744491020281 54 AMTR_s00045p00203910 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase PRMT4B, ATPRMT4B, evm_27.TU.AmTr_v1.0_scaffold00045.269 0.9208464522755119 38 AMTR_s00210p00025080 Protein root UVB sensitive 3 OS=Arabidopsis thaliana RUS3, evm_27.TU.AmTr_v1.0_scaffold00210.8 0.9203743605314284 14 AMTR_s00061p00073040 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.48 0.9203395762285597 36 AMTR_s00111p00106690 Cellular respiration.glycolysis.cytosolic glycolysis.phosphofructokinase activities.ATP-dependent phosphofructokinase PFK4, evm_27.TU.AmTr_v1.0_scaffold00111.80 0.9195906050210914 16 AMTR_s00090p00109700 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.ketoacyl-ACP synthase (mtKAS) evm_27.TU.AmTr_v1.0_scaffold00090.50 0.9192251183411424 48 AMTR_s00048p00224070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED34 component MED34, ATRECQ2, RECQL2, evm_27.TU.AmTr_v1.0_scaffold00048.212 0.9184490960786955 45 AMTR_s00025p00188170 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-59K snRNP component evm_27.TU.AmTr_v1.0_scaffold00025.229 0.9172325228844932 41 AMTR_s00159p00062070 RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor evm_27.TU.AmTr_v1.0_scaffold00159.24 0.9170107509122454 22 AMTR_s00066p00163770 ELF9, evm_27.TU.AmTr_v1.0_scaffold00066.177 0.9159608400659056 32 AMTR_s00170p00030060 Protein modification.phosphorylation.TKL kinase superfamily.LRR-II kinase evm_27.TU.AmTr_v1.0_scaffold00170.10 0.9158862448532212 23 AMTR_s00032p00163130 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.136 0.914740590309622 50 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator ARC6, evm_27.TU.AmTr_v1.0_scaffold00182.17 0.9146153021390078 72 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana SC35, ATSC35, At-SC35, evm_27.TU.AmTr_v1.0_scaffold00176.28 0.9144335963041168 47 AMTR_s00024p00237090 evm_27.TU.AmTr_v1.0_scaffold00024.265 0.9140860700422313 29 AMTR_s00057p00025530 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00057.9 0.9127574654635482 42 AMTR_s00058p00099960 evm_27.TU.AmTr_v1.0_scaffold00058.55 0.9118046040698917 32 AMTR_s00060p00170530 evm_27.TU.AmTr_v1.0_scaffold00060.107 0.9107489281489463 50 AMTR_s00038p00127830 F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.71 0.910717668826582 35 AMTR_s00029p00131600 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00029.149 0.9107012148832916 36 AMTR_s00019p00236090 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1, evm_27.TU.AmTr_v1.0_scaffold00019.329 0.9102147187831455 62 AMTR_s00146p00077810 Protein modification.phosphorylation.STE kinase superfamily.MAPKK kinase MK1, MKK2, ATMKK2, evm_27.TU.AmTr_v1.0_scaffold00146.45 0.9099594578963468 39 AMTR_s00106p00129110 evm_27.TU.AmTr_v1.0_scaffold00106.98 0.9096921795666589 40 AMTR_s00055p00188830 BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.121 0.9092323159979577 72 AMTR_s00071p00185920 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor TFIIIA, evm_27.TU.AmTr_v1.0_scaffold00071.194 0.9092245561908091 54 AMTR_s00163p00014030 Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00163.1 0.9088249825002115 97 AMTR_s00149p00082440 evm_27.TU.AmTr_v1.0_scaffold00149.66 0.9086533809784181 46 AMTR_s00002p00145180 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana SC35, ATSC35, At-SC35, evm_27.TU.AmTr_v1.0_scaffold00002.108 0.9084022164635541 47 AMTR_s00025p00127670 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase DAL1, evm_27.TU.AmTr_v1.0_scaffold00025.120 0.90810758247238 48 AMTR_s00109p00082150 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.MFP multifunctional enzyme AIM1, evm_27.TU.AmTr_v1.0_scaffold00109.66 0.9080020824817636 64 AMTR_s00024p00154360 Putative D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica ACD1, D-CDES, ATACD1, evm_27.TU.AmTr_v1.0_scaffold00024.110 0.9076988610202976 65 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.9074013909880685 53 AMTR_s00045p00142150 Secondary metabolism.terpenoids.mevalonate pathway.phosphomevalonate kinase evm_27.TU.AmTr_v1.0_scaffold00045.147 0.9070863860877836 56 AMTR_s00053p00134470 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component MUS81, ATMUS81, evm_27.TU.AmTr_v1.0_scaffold00053.84 0.9065424142253519 57 AMTR_s00009p00259730 DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MSH2-x mismatch repair heterodimers.MSH3 component ATMSH3, MSH3, evm_27.TU.AmTr_v1.0_scaffold00009.314 0.9056447422267624 58 AMTR_s00049p00185080 evm_27.TU.AmTr_v1.0_scaffold00049.184 0.9045611343770623 81 AMTR_s00063p00149680 LAF3, LAF3 ISF1, LAF3 ISF2, evm_27.TU.AmTr_v1.0_scaffold00063.40 0.9044500309381458 60 AMTR_s00029p00160830 Uncharacterized protein At2g02148 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.204 0.9042559423292131 61 AMTR_s00059p00168200 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00059.161 0.9041558272084333 64 AMTR_s00004p00159650 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.171 0.9023977673153519 67 AMTR_s00111p00017920 evm_27.TU.AmTr_v1.0_scaffold00111.3 0.902358471041854 68 AMTR_s00015p00199070 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase FLD, evm_27.TU.AmTr_v1.0_scaffold00015.53 0.9013948991936697 70 AMTR_s00010p00086200 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component TAF2, evm_27.TU.AmTr_v1.0_scaffold00010.48 0.9007803790985636 86 AMTR_s00045p00199380 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase evm_27.TU.AmTr_v1.0_scaffold00045.257 0.9004845921098341 73 AMTR_s00002p00258740 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.427 0.8996149730331308 76 AMTR_s00101p00117720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma evm_27.TU.AmTr_v1.0_scaffold00101.91 0.8992406649087031 90 AMTR_s00016p00255820 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00016.335 0.8990908451296749 88 AMTR_s00131p00060240 DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00131.35 0.8981022767616077 87 AMTR_s00078p00112410 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.cobalamine-independent methionine synthase ATCIMS, ATMS1, ATMETS, evm_27.TU.AmTr_v1.0_scaffold00078.85 0.8974928427856893 98 AMTR_s00110p00138440 Solute transport.carrier-mediated transport.DMT superfamily.UPS nucleobase cation transporter UPS1, ATUPS1, evm_27.TU.AmTr_v1.0_scaffold00110.113 0.8972503830630678 90 AMTR_s00012p00263630 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UPP, PYRR, evm_27.TU.AmTr_v1.0_scaffold00012.347 0.8968782356389867 92 AMTR_s00001p00255740 Coenzyme metabolism.tetrahydrofolate synthesis.dihydrofolate synthetase GLA1, EMB9, DFA, ATDFA, evm_27.TU.AmTr_v1.0_scaffold00001.339 0.8957589175396793 100 AMTR_s00009p00202340 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.129 0.8949428371171836 98 AMTR_s00040p00218420 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.small subunit U2AF35B, ATU2AF35B, evm_27.TU.AmTr_v1.0_scaffold00040.235 0.8946630089521878 99 AMTR_s00169p00051950 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component ATB BETA, evm_27.TU.AmTr_v1.0_scaffold00169.32 0.8945665296477474 100