Sequence Description Alias PCC hrr AMTR_s00004p00045050 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.28 0.9046525180915282 3 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8995189591553331 6 AMTR_s00055p00167390 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F, evm_27.TU.AmTr_v1.0_scaffold00055.87 0.8887076145717332 3 AMTR_s00048p00164020 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00048.117 0.8866498820297225 6 AMTR_s00057p00208300 evm_27.TU.AmTr_v1.0_scaffold00057.251 0.8828254702641769 5 AMTR_s00058p00125550 evm_27.TU.AmTr_v1.0_scaffold00058.89 0.8783191235290633 6 AMTR_s00046p00170580 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein SMG7, evm_27.TU.AmTr_v1.0_scaffold00046.93 0.8745379148571605 12 AMTR_s00072p00045010 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00072.15 0.8723663423305514 8 AMTR_s00019p00230710 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.ADO-type photoreceptor LKP1, ADO1, ZTL, FKL2, evm_27.TU.AmTr_v1.0_scaffold00019.314 0.8694927314792512 9 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8675843451372096 14 AMTR_s00059p00094000 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.ARP AP-endonuclease ARP, evm_27.TU.AmTr_v1.0_scaffold00059.68 0.8675706712168385 11 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8631344806083726 13 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein ETR, ETR1, EIN1, AtETR1, evm_27.TU.AmTr_v1.0_scaffold00032.33 0.859917859073691 35 AMTR_s00045p00185750 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC15 component evm_27.TU.AmTr_v1.0_scaffold00045.231 0.8594417062519638 14 AMTR_s00111p00140620 RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold00111.120 0.8588205882859709 15 AMTR_s00058p00188470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00058.186 0.8550861570648516 16 AMTR_s00036p00168840 Multi-process regulation.circadian clock.evening element regulation.Evening complex (EC).ELF3 component ELF3, PYK20, evm_27.TU.AmTr_v1.0_scaffold00036.83 0.8536657702581965 17 AMTR_s00071p00180880 MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.184 0.8534843834870297 18 AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB44, SAUL1, ATPUB44, evm_27.TU.AmTr_v1.0_scaffold00044.147 0.8498624374711491 19 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8487153439544751 42 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8457426284253272 38 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.8455248514422672 22 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH7, evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8439406551579602 23 AMTR_s00142p00049490 Nutrient uptake.phosphorus assimilation.phosphate signalling.PHR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00142.28 0.8423784754287881 24 AMTR_s00002p00225810 RNA biosynthesis.transcriptional activation.bHLH transcription factor ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1, evm_27.TU.AmTr_v1.0_scaffold00002.248 0.8420224234705522 25 AMTR_s00002p00195630 RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana PEP, evm_27.TU.AmTr_v1.0_scaffold00002.178 0.841079029637166 26 AMTR_s00022p00176740 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.187 0.8402357797950079 27 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.8400152035996572 28 AMTR_s00034p00071480 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana ITN1, evm_27.TU.AmTr_v1.0_scaffold00034.17 0.8398084235056618 29 AMTR_s00019p00244830 AAA-ATPase At3g50940 OS=Arabidopsis thaliana AATP1, evm_27.TU.AmTr_v1.0_scaffold00019.374 0.8386767356708835 30 AMTR_s00088p00164440 RNA biosynthesis.transcriptional activation.WRKY transcription factor AtWRKY20, WRKY20, evm_27.TU.AmTr_v1.0_scaffold00088.137 0.8383198590565579 31 AMTR_s00068p00075130 5-adenylylsulfate reductase-like 7 OS=Arabidopsis thaliana ATAPRL7, APRL7, evm_27.TU.AmTr_v1.0_scaffold00068.32 0.8366887476944075 32 AMTR_s00004p00270260 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.294 0.8327508888764319 33 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor NINJA, evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8312104991691647 39 AMTR_s00029p00202030 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00029.286 0.8270312458826488 35 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8264761199784589 44 AMTR_s00061p00057890 HAP8, evm_27.TU.AmTr_v1.0_scaffold00061.33 0.8252472198042222 60 AMTR_s00029p00127080 evm_27.TU.AmTr_v1.0_scaffold00029.145 0.8252013133762068 38 AMTR_s00146p00095280 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade A phosphatase HAB1, evm_27.TU.AmTr_v1.0_scaffold00146.58 0.8237328491957182 50 AMTR_s00092p00134420 Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase evm_27.TU.AmTr_v1.0_scaffold00092.100 0.8208201036890642 41 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase ATMKP1, MKP1, evm_27.TU.AmTr_v1.0_scaffold00174.16 0.8207604907310303 42 AMTR_s00041p00174550 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132, evm_27.TU.AmTr_v1.0_scaffold00041.131 0.8195256645588174 43 AMTR_s00059p00106830 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor IDD2, AtIDD2, evm_27.TU.AmTr_v1.0_scaffold00059.81 0.8190570089368314 44 AMTR_s00010p00228130 UBP1-associated protein 2A OS=Arabidopsis thaliana UBA2A, evm_27.TU.AmTr_v1.0_scaffold00010.256 0.8157509973476195 78 AMTR_s00058p00174910 Enzyme classification.EC_1 oxidoreductases.EC_1.17 oxidoreductase acting on CH or CH2 group FDH, evm_27.TU.AmTr_v1.0_scaffold00058.164 0.8128359868044548 48 AMTR_s00001p00257700 evm_27.TU.AmTr_v1.0_scaffold00001.352 0.8104807378659542 49 AMTR_s00157p00079360 Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana ATRBP47C', RBP47C', evm_27.TU.AmTr_v1.0_scaffold00157.42 0.8101379102442399 50 AMTR_s00012p00035940 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00012.6 0.8095650426857467 65 AMTR_s00017p00253050 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase evm_27.TU.AmTr_v1.0_scaffold00017.262 0.8092592057066259 52 AMTR_s00010p00175790 evm_27.TU.AmTr_v1.0_scaffold00010.142 0.8075612100039468 53 AMTR_s00019p00227240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REIL maturation factor FZF, evm_27.TU.AmTr_v1.0_scaffold00019.294 0.8065586549637338 61 AMTR_s00072p00181720 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein ATHSP70, HSP70 0.8029930100309749 56 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.802404925601595 57 AMTR_s00175p00042660 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00175.17 0.8022299795649143 58 AMTR_s00049p00211440 Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein evm_27.TU.AmTr_v1.0_scaffold00049.238 0.8017523929078716 81 AMTR_s00018p00087700 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec12-type guanyl-nucleotide exchange factor (GEF) evm_27.TU.AmTr_v1.0_scaffold00018.39 0.7993015886991809 63 AMTR_s00016p00224460 evm_27.TU.AmTr_v1.0_scaffold00016.206 0.7992235017807281 64 AMTR_s00009p00261830 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) ATMP2, ATMAPR3, MAPR3, MSBP2, evm_27.TU.AmTr_v1.0_scaffold00009.339 0.7958249493692259 67 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1, evm_27.TU.AmTr_v1.0_scaffold00032.93 0.7941374055829075 70 AMTR_s00002p00167510 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase evm_27.TU.AmTr_v1.0_scaffold00002.141 0.792754769646018 68 AMTR_s00088p00111920 evm_27.TU.AmTr_v1.0_scaffold00088.75 0.7917270960216896 69 AMTR_s00107p00103680 Phytohormones.abscisic acid.perception and signalling.PYR/PYL-receptor.cytoplasm-localized receptor complex.PYL/RCAR-type receptor component PYL8, RCAR3, evm_27.TU.AmTr_v1.0_scaffold00107.32 0.7902626871446242 70 AMTR_s00021p00214440 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein evm_27.TU.AmTr_v1.0_scaffold00021.191 0.7891115383613716 73 AMTR_s00069p00055450 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.33 0.7889409891194704 74 AMTR_s00029p00040760 Multi-process regulation.circadian clock.morning element regulation.CHE repression factor evm_27.TU.AmTr_v1.0_scaffold00029.28 0.7886414842535996 75 AMTR_s00071p00153290 evm_27.TU.AmTr_v1.0_scaffold00071.140 0.7876584612250969 94 AMTR_s00065p00171490 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Fip1 component FIP1[V], ATFIP1[V], FIPS5, ATFIPS5, evm_27.TU.AmTr_v1.0_scaffold00065.140 0.7853931155628 80 AMTR_s00078p00087780 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VII kinase families.RLCK-VIIa kinase evm_27.TU.AmTr_v1.0_scaffold00078.59 0.7851109398482476 81 AMTR_s00111p00066720 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (STP-type) ATSTP1, STP1, evm_27.TU.AmTr_v1.0_scaffold00111.36 0.7841981314849679 82 AMTR_s00090p00122120 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.fumarylacetoacetate hydrolase evm_27.TU.AmTr_v1.0_scaffold00090.61 0.7839952582142516 83 AMTR_s00041p00189930 Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.162 0.783157812049825 85 AMTR_s00028p00190780 OBERON-like protein OS=Nicotiana benthamiana OBE2, evm_27.TU.AmTr_v1.0_scaffold00028.83 0.7831252559330496 86 AMTR_s00061p00071760 evm_27.TU.AmTr_v1.0_scaffold00061.47 0.7828376076522805 87 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.7827974819751429 88 AMTR_s00056p00188580 Clathrin interactor EPSIN 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.170 0.7827568007017581 90 AMTR_s00045p00036790 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease evm_27.TU.AmTr_v1.0_scaffold00045.14 0.7826137326307988 95 AMTR_s00103p00147670 evm_27.TU.AmTr_v1.0_scaffold00103.105 0.7803330764395513 94 AMTR_s00059p00136790 RNA biosynthesis.transcriptional activation.BZR transcription factor BEH3, evm_27.TU.AmTr_v1.0_scaffold00059.116 0.7801636481624585 95 AMTR_s00099p00127980 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.112 0.7787240264746521 96 AMTR_s00057p00046830 Acetate/butyrate--CoA ligase AAE7, peroxisomal OS=Arabidopsis thaliana ACN1, AAE7, evm_27.TU.AmTr_v1.0_scaffold00057.25 0.7786671536543615 97