Sequence Description Alias PCC hrr AMTR_s00007p00267150 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP107 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00007.380 0.9607879830674824 2 AMTR_s00045p00068210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component evm_27.TU.AmTr_v1.0_scaffold00045.55 0.9521515338807438 23 AMTR_s00033p00039610 Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.16 0.951032874599393 4 AMTR_s00101p00067890 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00101.41 0.9504625545293454 5 AMTR_s00065p00048130 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.24 0.949991741739334 15 AMTR_s00039p00144340 evm_27.TU.AmTr_v1.0_scaffold00039.98 0.9494345552152189 7 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.9482949820007969 16 AMTR_s00062p00145630 CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00062.132 0.9467883458335478 8 AMTR_s00050p00215890 AtTPR2, TPR2, evm_27.TU.AmTr_v1.0_scaffold00050.82 0.94625304173446 9 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.9458886201717784 10 AMTR_s00041p00059380 evm_27.TU.AmTr_v1.0_scaffold00041.32 0.9453104006042837 31 AMTR_s00110p00053630 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin SCC2, ATSCC2, EMB2773, evm_27.TU.AmTr_v1.0_scaffold00110.24 0.9446848944838824 38 AMTR_s00009p00268760 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1, evm_27.TU.AmTr_v1.0_scaffold00009.431 0.941962909062804 13 AMTR_s00154p00021020 Protein RIK OS=Zea mays RIK, evm_27.TU.AmTr_v1.0_scaffold00154.5 0.9411024993765081 14 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.940539179202592 42 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9402746198114735 43 AMTR_s00001p00255740 Coenzyme metabolism.tetrahydrofolate synthesis.dihydrofolate synthetase GLA1, EMB9, DFA, ATDFA, evm_27.TU.AmTr_v1.0_scaffold00001.339 0.9399231708356639 17 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana RST1, evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9399208516093277 18 AMTR_s00072p00102490 evm_27.TU.AmTr_v1.0_scaffold00072.49 0.9397111584084837 19 AMTR_s00002p00268330 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00002.535 0.9387056081270359 35 AMTR_s00022p00251260 RNA processing.organelle machineries.RNA modification.tRNA thiolation.MnmA pathway.tRNA thiouridylase evm_27.TU.AmTr_v1.0_scaffold00022.388 0.9375771726417396 21 AMTR_s00061p00187730 evm_27.TU.AmTr_v1.0_scaffold00061.214 0.9373184336557194 22 AMTR_s00101p00084550 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF77/Rna14 component ATCSTF77, CSTF77, evm_27.TU.AmTr_v1.0_scaffold00101.61 0.936520686892186 32 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana emb2004, evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9364717828952827 24 AMTR_s00006p00266490 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana AAE17, evm_27.TU.AmTr_v1.0_scaffold00006.289 0.9362583793950826 25 AMTR_s00044p00068470 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.zinc cation transporter (Zn-CDF-type) evm_27.TU.AmTr_v1.0_scaffold00044.39 0.9356522000924138 26 AMTR_s00009p00266540 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.396 0.935276056841139 27 AMTR_s00095p00091200 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana CIP111, evm_27.TU.AmTr_v1.0_scaffold00095.52 0.9350552499771656 29 AMTR_s00025p00142780 Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.155 0.9344844874687117 29 AMTR_s00055p00187070 Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana EDM2, evm_27.TU.AmTr_v1.0_scaffold00055.116 0.9343659873700552 33 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3, evm_27.TU.AmTr_v1.0_scaffold00026.2 0.9340393103899456 44 AMTR_s00138p00029150 evm_27.TU.AmTr_v1.0_scaffold00138.10 0.9340375221214455 41 AMTR_s00069p00066350 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.40 0.9338647830933623 33 AMTR_s00045p00060470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.PLANTKAP transport karyopherin evm_27.TU.AmTr_v1.0_scaffold00045.44 0.9338427604631749 34 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator ARC6, evm_27.TU.AmTr_v1.0_scaffold00182.17 0.9335218959567535 35 AMTR_s00059p00208660 evm_27.TU.AmTr_v1.0_scaffold00059.241 0.9334740032769421 36 AMTR_s00092p00069380 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP5/TAC12 component PTAC12, HMR, evm_27.TU.AmTr_v1.0_scaffold00092.35 0.9333493303865316 37 AMTR_s00111p00138070 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase EDD, EDD1, evm_27.TU.AmTr_v1.0_scaffold00111.118 0.9332541097934447 38 AMTR_s00010p00241770 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.plastidial glucanotransferase DPE1, evm_27.TU.AmTr_v1.0_scaffold00010.311 0.9331570515552459 59 AMTR_s00093p00080210 Tubulin gamma-1 chain OS=Arabidopsis thaliana TUBG1, evm_27.TU.AmTr_v1.0_scaffold00093.21 0.9322171858140856 40 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9319704162140662 41 AMTR_s00008p00155920 evm_27.TU.AmTr_v1.0_scaffold00008.78 0.931491194126729 42 AMTR_s00025p00182750 RNA biosynthesis.rRNA biogenesis.NOF1 control factor NOF1, evm_27.TU.AmTr_v1.0_scaffold00025.222 0.9314379012851961 43 AMTR_s00019p00242420 evm_27.TU.AmTr_v1.0_scaffold00019.358 0.9311822467334997 44 AMTR_s00002p00267140 Protein modification.protein folding and quality control.N-glycan-dependent machinery.MNL alpha-1,2 exomannosidase evm_27.TU.AmTr_v1.0_scaffold00002.520 0.9307677501492678 45 AMTR_s00061p00213120 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00061.265 0.9306546679005187 68 AMTR_s00025p00200390 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase HEN2, evm_27.TU.AmTr_v1.0_scaffold00025.254 0.9306338687765584 70 AMTR_s00001p00273020 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00001.586 0.9302908419955339 77 AMTR_s00030p00197730 Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.130 0.9302883724417154 49 AMTR_s00001p00269990 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT3 protease ATSBT3.5, SBT3.5, evm_27.TU.AmTr_v1.0_scaffold00001.453 0.9299655945716833 50 AMTR_s00071p00069340 O-fucosyltransferase 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.38 0.9283834430707815 52 AMTR_s00025p00221330 evm_27.TU.AmTr_v1.0_scaffold00025.310 0.928152057944698 53 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4, evm_27.TU.AmTr_v1.0_scaffold00007.52 0.9279652176905668 54 AMTR_s00009p00251110 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease TPP2, evm_27.TU.AmTr_v1.0_scaffold00009.258 0.9277250815009686 75 AMTR_s00059p00131310 Methyltransferase-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.108 0.9277087650278321 92 AMTR_s00004p00115360 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.98 0.9268967469718301 92 AMTR_s00029p00178860 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-48K snRNP component evm_27.TU.AmTr_v1.0_scaffold00029.238 0.9266210166944941 58 AMTR_s00012p00235730 TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana BTAF1, RGD3, CHA16, ATBTAF1, CHR16, evm_27.TU.AmTr_v1.0_scaffold00012.195 0.9264182410313568 59 AMTR_s00019p00219410 evm_27.TU.AmTr_v1.0_scaffold00019.273 0.9262578124413481 60 AMTR_s00080p00046380 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.12 0.9251273268120432 62 AMTR_s00106p00098180 evm_27.TU.AmTr_v1.0_scaffold00106.68 0.9243213901955503 70 AMTR_s00055p00188830 BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.121 0.9240517050690721 65 AMTR_s00066p00191280 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO, evm_27.TU.AmTr_v1.0_scaffold00066.244 0.9237071045560769 66 AMTR_s00041p00133990 Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT-type) OPT7, ATOPT7, evm_27.TU.AmTr_v1.0_scaffold00041.94 0.9237056188262388 67 AMTR_s00033p00026050 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA3, KEA3, evm_27.TU.AmTr_v1.0_scaffold00033.11 0.9231985982021933 68 AMTR_s00005p00116160 evm_27.TU.AmTr_v1.0_scaffold00005.31 0.9227903043328488 69 AMTR_s00090p00109700 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.ketoacyl-ACP synthase (mtKAS) evm_27.TU.AmTr_v1.0_scaffold00090.50 0.9227271941928835 70 AMTR_s00032p00034370 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE evm_27.TU.AmTr_v1.0_scaffold00032.15 0.922725470718839 71 AMTR_s00016p00255820 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00016.335 0.9224244328167062 72 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9215859371360298 84 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9214520240910536 94 AMTR_s00055p00041510 Histidine kinase 1 OS=Arabidopsis thaliana AHK1, HK1, ATHK1, evm_27.TU.AmTr_v1.0_scaffold00055.12 0.9213807137836765 94 AMTR_s00030p00037130 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-III complex-specific components.TRS85 component evm_27.TU.AmTr_v1.0_scaffold00030.12 0.9212588210435142 76 AMTR_s00032p00018130 Obg-like ATPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.3 0.9209325737962188 77 AMTR_s00010p00044630 Protein SWEETIE OS=Arabidopsis thaliana SWEETIE, evm_27.TU.AmTr_v1.0_scaffold00010.22 0.9209205637311939 78 AMTR_s00022p00127120 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana CRR22, evm_27.TU.AmTr_v1.0_scaffold00022.118 0.9206317482668275 79 AMTR_s00065p00038950 evm_27.TU.AmTr_v1.0_scaffold00065.17 0.9204546434884504 80 AMTR_s00069p00147710 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter NAP8, ATNAP8, evm_27.TU.AmTr_v1.0_scaffold00069.114 0.9202330661397508 81 AMTR_s00165p00033420 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana TTL1, evm_27.TU.AmTr_v1.0_scaffold00165.18 0.9201841165423847 82 AMTR_s00085p00151790 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component ATB BETA, evm_27.TU.AmTr_v1.0_scaffold00085.94 0.919783516231335 84 AMTR_s00029p00027850 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin ATVIIIA, VIIIA, evm_27.TU.AmTr_v1.0_scaffold00029.10 0.9193621463997256 85 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.919053398856439 86 AMTR_s00048p00149840 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.102 0.9187710165972018 87 AMTR_s00081p00135280 evm_27.TU.AmTr_v1.0_scaffold00081.50 0.9187467347245251 88 AMTR_s00056p00141500 Protein modification.phosphorylation.TKL kinase superfamily.LysM kinase evm_27.TU.AmTr_v1.0_scaffold00056.115 0.9186384942545615 89 AMTR_s00049p00185080 evm_27.TU.AmTr_v1.0_scaffold00049.184 0.9184328124200051 90 AMTR_s00019p00204140 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS52/POK component POK, TTD8, ATVPS52, evm_27.TU.AmTr_v1.0_scaffold00019.240 0.9182895321509 91 AMTR_s00092p00120720 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00092.84 0.9176741151669006 92 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase SEC, evm_27.TU.AmTr_v1.0_scaffold00013.214 0.9176311878769158 93 AMTR_s00041p00141370 evm_27.TU.AmTr_v1.0_scaffold00041.101 0.9173871947387512 94 AMTR_s00159p00058480 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana EMB2654, evm_27.TU.AmTr_v1.0_scaffold00159.22 0.917037648635937 95 AMTR_s00078p00196690 evm_27.TU.AmTr_v1.0_scaffold00078.206 0.9169622572969551 96 AMTR_s00001p00253330 evm_27.TU.AmTr_v1.0_scaffold00001.328 0.9166272316124157 97 AMTR_s00044p00037180 Cell cycle.organelle machineries.organelle fission.plastid division.ARC3 FtsZ assembly factor ARC3, evm_27.TU.AmTr_v1.0_scaffold00044.12 0.9164788499595066 99 AMTR_s00016p00133200 evm_27.TU.AmTr_v1.0_scaffold00016.91 0.9163266813930788 100