Sequence Description Alias PCC hrr AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2, evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9374337858650641 2 AMTR_s00063p00087380 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00063.12 0.9297638183393762 2 AMTR_s00025p00214350 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.288 0.9285353381335022 3 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.927485445596165 4 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9237561917278881 42 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor VAC1, ECB2, ATECB2 0.9234424346328 14 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component TIC110, ATTIC110, evm_27.TU.AmTr_v1.0_scaffold00017.54 0.9206367245502266 32 AMTR_s00027p00142670 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.43 0.9157503978458165 46 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4, evm_27.TU.AmTr_v1.0_scaffold00007.52 0.915426026943055 69 AMTR_s00018p00074980 RNA biosynthesis.transcriptional activation.NAC transcription factor anac045, NAC045, evm_27.TU.AmTr_v1.0_scaffold00018.28 0.9136310760432053 10 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9094646442000963 53 AMTR_s00033p00116200 KH domain-containing protein HEN4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.57 0.9085639198699029 14 AMTR_s00013p00056220 MEI1, evm_27.TU.AmTr_v1.0_scaffold00013.19 0.9041134611259699 17 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9040967359580899 84 AMTR_s00048p00132600 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976, evm_27.TU.AmTr_v1.0_scaffold00048.78 0.9032626041157065 53 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase TADA, ATTADA, evm_27.TU.AmTr_v1.0_scaffold00029.309 0.9030308845029646 51 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16, evm_27.TU.AmTr_v1.0_scaffold00682.1 0.8998688469083232 47 AMTR_s00009p00236210 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component MURE, PDE316, ATMURE, evm_27.TU.AmTr_v1.0_scaffold00009.196 0.8991841573507112 37 AMTR_s00004p00095690 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase RIF10, PNP, evm_27.TU.AmTr_v1.0_scaffold00004.78 0.8983217949427689 24 AMTR_s00029p00062590 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.57 0.8971997851669158 36 AMTR_s00003p00075520 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GUN1, evm_27.TU.AmTr_v1.0_scaffold00003.43 0.8964831822891715 32 AMTR_s00182p00016710 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3, evm_27.TU.AmTr_v1.0_scaffold00182.5 0.8955901612758134 27 AMTR_s00049p00137690 evm_27.TU.AmTr_v1.0_scaffold00049.118 0.8954850173619158 28 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 NRPA1, evm_27.TU.AmTr_v1.0_scaffold00022.362 0.8954265750897539 59 AMTR_s00092p00052470 Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana 0.8943696384112624 31 AMTR_s00057p00189360 Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.205 0.8929653097306434 33 AMTR_s00096p00107320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase ECHID, DHNS, evm_27.TU.AmTr_v1.0_scaffold00096.66 0.8916488731399264 65 AMTR_s00007p00152220 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD, evm_27.TU.AmTr_v1.0_scaffold00007.112 0.8915321171324136 36 AMTR_s00044p00137040 Solute transport.channels.GLR ligand-gated cation channel GLR3.3, ATGLR3.3, evm_27.TU.AmTr_v1.0_scaffold00044.128 0.8907304638153773 92 AMTR_s00111p00089410 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor evm_27.TU.AmTr_v1.0_scaffold00111.60 0.890651452167802 38 AMTR_s00010p00247870 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.340 0.890414477628561 55 AMTR_s00004p00128400 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase ATAO, AT-AO1, AtAO1, AO1, AAO1, AOalpha, evm_27.TU.AmTr_v1.0_scaffold00004.118 0.8903667012794372 40 AMTR_s00056p00047160 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083, evm_27.TU.AmTr_v1.0_scaffold00056.29 0.8902105877094204 47 AMTR_s00006p00253660 Cell cycle.organelle machineries.DNA replication.type-Ia DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00006.171 0.8892399341161351 85 AMTR_s00044p00151840 Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.157 0.8888410060993064 44 AMTR_s00080p00141940 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL, evm_27.TU.AmTr_v1.0_scaffold00080.64 0.8882084386824097 74 AMTR_s00011p00265800 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana EMB1270, evm_27.TU.AmTr_v1.0_scaffold00011.222 0.8878355021123118 67 AMTR_s00038p00088230 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase VALRS, TWN2, evm_27.TU.AmTr_v1.0_scaffold00038.43 0.88694204225382 55 AMTR_s00001p00272780 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor HAT3.1, evm_27.TU.AmTr_v1.0_scaffold00001.562 0.8860250816618619 51 AMTR_s00010p00246330 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor evm_27.TU.AmTr_v1.0_scaffold00010.333 0.8849640695057147 52 AMTR_s00121p00103870 DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00121.21 0.883729531928719 55 AMTR_s00024p00162030 Protein trichome birefringence OS=Arabidopsis thaliana TBR 0.8822845972819277 58 AMTR_s00354p00009120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312, evm_27.TU.AmTr_v1.0_scaffold00354.1 0.8822057895456541 91 AMTR_s00089p00111500 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.FAN1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00089.62 0.8784978212157236 68 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.8779320382068014 100 AMTR_s00088p00169250 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.143 0.8770684186976084 72 AMTR_s00046p00150030 RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P PRORP1, evm_27.TU.AmTr_v1.0_scaffold00046.80 0.873417420519475 82 AMTR_s00025p00024460 5-3 exoribonuclease 3 OS=Arabidopsis thaliana XRN3, AtXRN3, evm_27.TU.AmTr_v1.0_scaffold00025.5 0.8728088815859842 84 AMTR_s00029p00241780 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00029.416 0.8726357304287153 85 AMTR_s00004p00150160 Elongation factor 2 OS=Parachlorella kessleri evm_27.TU.AmTr_v1.0_scaffold00004.156 0.8705264470355074 92 AMTR_s00078p00176050 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xb kinase BIN1, BRI1, DWF2, ATBRI1, CBB2, evm_27.TU.AmTr_v1.0_scaffold00078.169 0.8704633545019055 94 AMTR_s00049p00223290 Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.264 0.8687023945739951 100