Sequence Description Alias PCC hrr AMTR_s00003p00079190 External stimuli response.temperature.temperature sensors.PHY-B temperature sensor protein HY3, OOP1, PHYB, evm_27.TU.AmTr_v1.0_scaffold00003.45 0.9473632781785746 1 AMTR_s00107p00109770 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component FTSH11, evm_27.TU.AmTr_v1.0_scaffold00107.33 0.9199343855849351 2 AMTR_s00044p00107090 Cytoskeleton.cp-actin-dependent plastid movement.PMI1/PMI15 cp-actin stability factor PMI1, evm_27.TU.AmTr_v1.0_scaffold00044.78 0.9191064450113923 4 AMTR_s00149p00031690 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor ATSCO1/CPEF-G, SCO1, ATSCO1, evm_27.TU.AmTr_v1.0_scaffold00149.10 0.90910489281439 6 AMTR_s00126p00110160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.PMH RNA helicase PMH2, ATRH53, evm_27.TU.AmTr_v1.0_scaffold00126.53 0.9043788079649554 11 AMTR_s00019p00088750 Protein TSS OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.66 0.9007406062993623 6 AMTR_s00109p00129480 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor emb2726, evm_27.TU.AmTr_v1.0_scaffold00109.135 0.899938233615476 42 AMTR_s00013p00226690 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.carbamoyl phosphate synthetase dimer.large subunit CARB, evm_27.TU.AmTr_v1.0_scaffold00013.174 0.8991698324913511 8 AMTR_s00065p00176540 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase ALDH11A3, evm_27.TU.AmTr_v1.0_scaffold00065.146 0.8973839267328584 17 AMTR_s00024p00153080 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00024.107 0.895472282979645 10 AMTR_s00007p00061550 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor JKD, evm_27.TU.AmTr_v1.0_scaffold00007.32 0.8941554075498761 11 AMTR_s00016p00164160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, evm_27.TU.AmTr_v1.0_scaffold00016.120 0.8932821756307519 26 AMTR_s00039p00159460 evm_27.TU.AmTr_v1.0_scaffold00039.112 0.8909928402273986 13 AMTR_s00039p00160690 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb28 protein PSB28, evm_27.TU.AmTr_v1.0_scaffold00039.114 0.8881925873180626 38 AMTR_s00003p00168720 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138, evm_27.TU.AmTr_v1.0_scaffold00003.145 0.8871798069865504 100 AMTR_s00049p00227880 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor ATRAB8D, ATRABE1B, RABE1b, evm_27.TU.AmTr_v1.0_scaffold00049.275 0.8859712980861227 26 AMTR_s00002p00266310 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) GR, EMB2360, ATGR2, evm_27.TU.AmTr_v1.0_scaffold00002.507 0.8850105501879107 64 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.8818900684397059 42 AMTR_s00097p00060630 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC, evm_27.TU.AmTr_v1.0_scaffold00097.13 0.8804037024405864 25 AMTR_s00043p00203580 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00043.64 0.880010665774431 63 AMTR_s00007p00251190 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR6 CRR6, evm_27.TU.AmTr_v1.0_scaffold00007.284 0.878713768978256 21 AMTR_s00165p00028990 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.13 0.8769736820026542 22 AMTR_s00002p00100650 evm_27.TU.AmTr_v1.0_scaffold00002.59 0.8766335300105658 95 AMTR_s00024p00238310 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana YLMG2, ATYLMG2, evm_27.TU.AmTr_v1.0_scaffold00024.270 0.8764383085973868 27 AMTR_s00002p00270990 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) CLH2, ATCLH2, evm_27.TU.AmTr_v1.0_scaffold00002.603 0.8752479073543457 25 AMTR_s00126p00013900 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP, evm_27.TU.AmTr_v1.0_scaffold00126.1 0.8748345703977709 55 AMTR_s00166p00060690 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00166.36 0.8739927481555402 39 AMTR_s00110p00042430 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein CLPB3, CLPB-P, APG6, evm_27.TU.AmTr_v1.0_scaffold00110.17 0.8722278313215287 58 AMTR_s00147p00070270 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor CHUP1, evm_27.TU.AmTr_v1.0_scaffold00147.32 0.8709284116897555 36 AMTR_s00018p00243310 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase CHLM, evm_27.TU.AmTr_v1.0_scaffold00018.150 0.8694834424398117 72 AMTR_s00049p00052690 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor GUN4, evm_27.TU.AmTr_v1.0_scaffold00049.26 0.8667393688473225 77 AMTR_s00001p00232760 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH5, VAR1, evm_27.TU.AmTr_v1.0_scaffold00001.249 0.8664007222078852 76 AMTR_s00110p00125440 Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.100 0.8663236997689855 38 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB, evm_27.TU.AmTr_v1.0_scaffold00044.119 0.8662514804509742 86 AMTR_s00009p00268850 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00009.433 0.8649256236360777 42 AMTR_s00045p00058890 evm_27.TU.AmTr_v1.0_scaffold00045.42 0.8644651196632023 43 AMTR_s00001p00271570 Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00001.492 0.864157765763713 44 AMTR_s00049p00201160 Solute transport.carrier-mediated transport.PHT2 phosphate transporter PHT2;1, ORF02, evm_27.TU.AmTr_v1.0_scaffold00049.215 0.8638463346475452 45 AMTR_s00006p00263760 Disease resistance protein RPM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.255 0.862353223042915 46 AMTR_s00109p00047950 Solute transport.carrier-mediated transport.TOC superfamily.TSUP transport protein evm_27.TU.AmTr_v1.0_scaffold00109.34 0.8607573822076973 48 AMTR_s00029p00223030 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2, evm_27.TU.AmTr_v1.0_scaffold00029.342 0.8601152538692827 78 AMTR_s00058p00051650 evm_27.TU.AmTr_v1.0_scaffold00058.23 0.8577708711230613 52 AMTR_s00047p00149040 Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana AAE1, evm_27.TU.AmTr_v1.0_scaffold00047.69 0.8568111636165195 53 AMTR_s00005p00239290 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) TZ, THI4, THI1, evm_27.TU.AmTr_v1.0_scaffold00005.125 0.8557448587847245 88 AMTR_s00140p00105610 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00140.51 0.8554210253331603 56 AMTR_s00005p00190510 evm_27.TU.AmTr_v1.0_scaffold00005.72 0.8548343043681098 57 AMTR_s00011p00245550 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.144 0.8536206130496226 70 AMTR_s00066p00165410 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP81D5, evm_27.TU.AmTr_v1.0_scaffold00066.180 0.8527185293809176 61 AMTR_s00009p00268340 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00009.422 0.8521861858806524 62 AMTR_s00066p00148680 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NIN transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.150 0.8515838551631227 64 AMTR_s00029p00034670 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.16 0.8510948683397751 65 AMTR_s00010p00259290 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.PKS phototropin signalling factor PKS4, evm_27.TU.AmTr_v1.0_scaffold00010.421 0.849100983827939 67 AMTR_s00029p00096200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component evm_27.TU.AmTr_v1.0_scaffold00029.89 0.8485372085396572 75 AMTR_s00078p00186900 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.192 0.8482433748657654 69 AMTR_s00092p00083700 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.44 0.8481887302702031 73 AMTR_s00028p00213700 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.MadB myosin adaptor protein Phox2, evm_27.TU.AmTr_v1.0_scaffold00028.102 0.8479754157624241 71 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component CPSF30, ATCPSF30, evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8478684824101569 72 AMTR_s00032p00227150 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00032.244 0.8478447731494697 73 AMTR_s00143p00079100 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT84B1, evm_27.TU.AmTr_v1.0_scaffold00143.18 0.8449508030283863 75 AMTR_s00022p00205270 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase ATLOX2, LOX2, evm_27.TU.AmTr_v1.0_scaffold00022.242 0.8444231536900777 91 AMTR_s00099p00074160 Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.55 0.842930203474943 77 AMTR_s00024p00252690 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate (PEP) carboxylase activity.PEP carboxylase ATPPC4, PPC4, evm_27.TU.AmTr_v1.0_scaffold00024.351 0.8427009458095666 78 AMTR_s00009p00163120 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00009.90 0.8410874301409491 81 AMTR_s00002p00271020 VAN3-binding protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.606 0.8410798743206409 81 AMTR_s00067p00056670 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.CDC5/MAC1 component ATCDC5, ATMYBCDC5, CDC5, evm_27.TU.AmTr_v1.0_scaffold00067.33 0.8404760376963377 83 AMTR_s00103p00133560 Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type) ATYSL3, YSL3, evm_27.TU.AmTr_v1.0_scaffold00103.83 0.8391147667077523 84 AMTR_s00005p00203240 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312, evm_27.TU.AmTr_v1.0_scaffold00005.80 0.8391116181310214 85 AMTR_s00065p00139210 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT4, MRS2-3, evm_27.TU.AmTr_v1.0_scaffold00065.95 0.8353774902239562 91 AMTR_s00079p00193400 evm_27.TU.AmTr_v1.0_scaffold00079.122 0.8338206050169404 93 AMTR_s00021p00211960 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XI kinase HSL1, evm_27.TU.AmTr_v1.0_scaffold00021.186 0.8309103577051413 98