Sequence Description Alias PCC hrr AMTR_s00024p00154360 Putative D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica ACD1, D-CDES, ATACD1, evm_27.TU.AmTr_v1.0_scaffold00024.110 0.9357377093419865 7 AMTR_s00183p00029940 evm_27.TU.AmTr_v1.0_scaffold00183.8 0.9342300306143745 2 AMTR_s00027p00142670 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.43 0.924826217464365 27 AMTR_s00028p00237040 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00028.124 0.9215054407821639 33 AMTR_s00048p00224070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED34 component MED34, ATRECQ2, RECQL2, evm_27.TU.AmTr_v1.0_scaffold00048.212 0.9179186012851 49 AMTR_s00001p00270540 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00001.464 0.9172566720377608 23 AMTR_s00033p00075910 emb1273, evm_27.TU.AmTr_v1.0_scaffold00033.33 0.9146649214512622 7 AMTR_s00014p00128310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase evm_27.TU.AmTr_v1.0_scaffold00014.46 0.913720149100625 23 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9135902106877395 47 AMTR_s00032p00225290 evm_27.TU.AmTr_v1.0_scaffold00032.241 0.913475024423097 67 AMTR_s00071p00100010 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.77 0.9134338902002727 26 AMTR_s00102p00018040 DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA ligase (LIG1) ATLIG1, LIG1, evm_27.TU.AmTr_v1.0_scaffold00102.3 0.9124699822584778 50 AMTR_s00001p00224830 evm_27.TU.AmTr_v1.0_scaffold00001.236 0.9118763345443935 15 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9116878581731811 70 AMTR_s00111p00017920 evm_27.TU.AmTr_v1.0_scaffold00111.3 0.9065339385562833 17 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9048290929646483 97 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9037040281684915 66 AMTR_s00025p00203820 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit CAC2, evm_27.TU.AmTr_v1.0_scaffold00025.261 0.9035380982143124 20 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme NAD-ME1, evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9033489454558057 93 AMTR_s00120p00041110 evm_27.TU.AmTr_v1.0_scaffold00120.11 0.9030050466134865 22 AMTR_s00183p00020680 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.bifunctional 5-aminoimidazole-4-carboxamide RN transformylase and IMP cyclohydrolase evm_27.TU.AmTr_v1.0_scaffold00183.5 0.9025896815919937 24 AMTR_s00096p00107320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase ECHID, DHNS, evm_27.TU.AmTr_v1.0_scaffold00096.66 0.9017964851222031 33 AMTR_s00019p00198460 evm_27.TU.AmTr_v1.0_scaffold00019.228 0.9009314745277381 25 AMTR_s00029p00062590 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.57 0.8997199442975244 31 AMTR_s00002p00090480 evm_27.TU.AmTr_v1.0_scaffold00002.47 0.8994809394336641 78 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.8994643754223627 79 AMTR_s00119p00070790 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group CS26, evm_27.TU.AmTr_v1.0_scaffold00119.52 0.8988333467473035 29 AMTR_s00002p00267110 Cell cycle.organelle machineries.DNA replication.single-stranded DNA (ssDNA) maintenance.OSB-type ssDNA-binding protein OSB1, evm_27.TU.AmTr_v1.0_scaffold00002.519 0.8981147739041156 32 AMTR_s00002p00263670 evm_27.TU.AmTr_v1.0_scaffold00002.481 0.8980460804985876 41 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III, evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8979339732066162 54 AMTR_s00012p00263630 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UPP, PYRR, evm_27.TU.AmTr_v1.0_scaffold00012.347 0.8965051662103006 92 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA2, KEA2, evm_27.TU.AmTr_v1.0_scaffold00009.318 0.8964456207715092 94 AMTR_s00045p00176400 Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.212 0.8962398491014657 52 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.8961893711465547 44 AMTR_s00025p00214350 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.288 0.8959418382057258 40 AMTR_s00048p00222520 evm_27.TU.AmTr_v1.0_scaffold00048.207 0.895490815638314 50 AMTR_s00071p00175860 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120, evm_27.TU.AmTr_v1.0_scaffold00071.178 0.8954193747339766 97 AMTR_s00002p00194810 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component CLPR4, evm_27.TU.AmTr_v1.0_scaffold00002.176 0.8951167322625501 52 AMTR_s00016p00206840 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00016.175 0.8945049013383939 48 AMTR_s00003p00269770 emb1923, evm_27.TU.AmTr_v1.0_scaffold00003.417 0.8937918754799805 51 AMTR_s00009p00236210 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component MURE, PDE316, ATMURE, evm_27.TU.AmTr_v1.0_scaffold00009.196 0.8920615314986374 54 AMTR_s00077p00105110 DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00077.90 0.89168772137252 55 AMTR_s00088p00159600 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00088.130 0.891578108408655 57 AMTR_s00092p00136000 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecA-type recombinase evm_27.TU.AmTr_v1.0_scaffold00092.102 0.891020193390645 61 AMTR_s00088p00077590 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP9, evm_27.TU.AmTr_v1.0_scaffold00088.47 0.8906350417552344 62 AMTR_s00049p00226280 Chloroplast sensor kinase, chloroplastic OS=Arabidopsis thaliana CSK, evm_27.TU.AmTr_v1.0_scaffold00049.272 0.8904556661266596 87 AMTR_s00034p00221180 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00034.92 0.8902726081961669 64 AMTR_s00089p00111500 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.FAN1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00089.62 0.8897807588968575 65 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.8896666300678878 68 AMTR_s00133p00020030 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.Whirly-type splicing factor ATWHY1, WHY1, PTAC1, evm_27.TU.AmTr_v1.0_scaffold00133.2 0.8892031776367926 67 AMTR_s00171p00041870 evm_27.TU.AmTr_v1.0_scaffold00171.18 0.8888005958071017 68 AMTR_s00175p00037000 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH8, evm_27.TU.AmTr_v1.0_scaffold00175.11 0.8873331590087171 85 AMTR_s00010p00016450 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00010.5 0.8869367752591888 97 AMTR_s00062p00185880 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CH-CPN60A, CPN60A, SLP, evm_27.TU.AmTr_v1.0_scaffold00062.184 0.8868969976752493 73 AMTR_s00045p00090540 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.KAE1 component evm_27.TU.AmTr_v1.0_scaffold00045.82 0.8858979381607986 75 AMTR_s00029p00114850 evm_27.TU.AmTr_v1.0_scaffold00029.125 0.8851224574234091 99 AMTR_s00010p00251120 evm_27.TU.AmTr_v1.0_scaffold00010.357 0.8844613086133741 80 AMTR_s00028p00187760 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein Hsp89.1, AtHsp90-6, AtHsp90.6, evm_27.TU.AmTr_v1.0_scaffold00028.80 0.8842599039917142 81 AMTR_s00004p00048050 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase IGPD, HISN5A, evm_27.TU.AmTr_v1.0_scaffold00004.31 0.8839145647557646 82 AMTR_s00001p00157430 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00001.144 0.8830251104503539 88 AMTR_s00111p00111440 evm_27.TU.AmTr_v1.0_scaffold00111.85 0.8828646050756586 89 AMTR_s00071p00125410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00071.102 0.8823055774794801 90 AMTR_s00046p00150030 RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P PRORP1, evm_27.TU.AmTr_v1.0_scaffold00046.80 0.8818672397711332 92 AMTR_s00031p00061040 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.26 0.8817055255671515 93 AMTR_s00031p00027380 Cell cycle.organelle machineries.organelle fission.plastid division.FtsZ prokaryotic-tubulin filaments.FtsZ2 component FTSZ2-2, evm_27.TU.AmTr_v1.0_scaffold00031.4 0.8813682341689104 94 AMTR_s00025p00115820 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor evm_27.TU.AmTr_v1.0_scaffold00025.105 0.879974468625428 95 AMTR_s00061p00180830 Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.199 0.8795751986702662 96 AMTR_s00126p00126070 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic22 component evm_27.TU.AmTr_v1.0_scaffold00126.65 0.879336273311312 97